Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:28 (22033): wrapper (7.7.26015): starting
08:28:28 (22033): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 08:28:28] Arguments: --nthreads 8
[2026-04-30 08:28:28] Threads: 8
[2026-04-30 08:28:28] Checking for CVMFS
[2026-04-30 08:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 08:28:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 08:28:32] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 08:28:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 08:28:33] 2.11.2.0 21071 20964 101124 159035 3 11 22510427 25165824 96 130560 0 7087472 99.934 5237056 9024 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 08:28:33] CVMFS is ok
[2026-04-30 08:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 08:28:34] Checking for apptainer binary...
[2026-04-30 08:28:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 08:28:34] Running /usr/bin/apptainer --version
[2026-04-30 08:28:34] apptainer version 1.3.2-1.el7
[2026-04-30 08:28:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 08:28:42] cg-vwn360.simple-grid.lan
[2026-04-30 08:28:42] apptainer works
[2026-04-30 08:28:42] Set ATHENA_PROC_NUMBER=8
[2026-04-30 08:28:42] Set ATHENA_CORE_NUMBER=8
[2026-04-30 08:28:42] Starting ATLAS job with PandaID=7119391967
[2026-04-30 08:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 14:13:42]  *** The last 200 lines of the pilot log: ***
[2026-04-30 14:13:42] 2026-04-30 12:12:34,623 | INFO     | log transfer has been attempted: DONE
[2026-04-30 14:13:42] 2026-04-30 12:12:34,623 | INFO     | job 7119391967 has finished - writing final server update
[2026-04-30 14:13:42] 2026-04-30 12:12:34,623 | INFO     | total number of processed events: 400 (read)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,625 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7119391967/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,626 | INFO     | extracted standard info from prmon json
[2026-04-30 14:13:42] 2026-04-30 12:12:34,626 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 14:13:42] 2026-04-30 12:12:34,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 14:13:42] 2026-04-30 12:12:34,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 14:13:42] 2026-04-30 12:12:34,648 | INFO     | fitting pss+swap vs Time
[2026-04-30 14:13:42] 2026-04-30 12:12:34,649 | INFO     | sum of square deviations: 10842205148.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,652 | INFO     | sum of deviations: 203221598087.99997
[2026-04-30 14:13:42] 2026-04-30 12:12:34,652 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,653 | INFO     | mean y: 2441538.9327217126
[2026-04-30 14:13:42] 2026-04-30 12:12:34,653 | INFO     | intersect: 2441538.9327217126
[2026-04-30 14:13:42] 2026-04-30 12:12:34,653 | INFO     | chi2: 9.823812847201696
[2026-04-30 14:13:42] 2026-04-30 12:12:34,654 | INFO     | sum of square deviations: 10352419220.5
[2026-04-30 14:13:42] 2026-04-30 12:12:34,658 | INFO     | sum of deviations: 243484547651.5
[2026-04-30 14:13:42] 2026-04-30 12:12:34,658 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,658 | INFO     | mean y: 2453948.096273292
[2026-04-30 14:13:42] 2026-04-30 12:12:34,658 | INFO     | intersect: 2453948.096273292
[2026-04-30 14:13:42] 2026-04-30 12:12:34,667 | INFO     | chi2: 8.361601043885262
[2026-04-30 14:13:42] 2026-04-30 12:12:34,667 | INFO     | current chi2=8.361601043885262 (change=14.884361358054003 %)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,667 | INFO     | right removable region: 321
[2026-04-30 14:13:42] 2026-04-30 12:12:34,668 | INFO     | sum of square deviations: 10352419220.5
[2026-04-30 14:13:42] 2026-04-30 12:12:34,671 | INFO     | sum of deviations: 84555073506.00002
[2026-04-30 14:13:42] 2026-04-30 12:12:34,672 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,672 | INFO     | mean y: 2478479.1242236025
[2026-04-30 14:13:42] 2026-04-30 12:12:34,672 | INFO     | intersect: 2478479.1242236025
[2026-04-30 14:13:42] 2026-04-30 12:12:34,672 | INFO     | chi2: 4.580812744905167
[2026-04-30 14:13:42] 2026-04-30 12:12:34,673 | INFO     | current chi2=4.580812744905167 (change=53.37031745052017 %)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,673 | INFO     | sum of square deviations: 9877610318.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,677 | INFO     | sum of deviations: -5061927802.999992
[2026-04-30 14:13:42] 2026-04-30 12:12:34,677 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,677 | INFO     | mean y: 2507233.0630914825
[2026-04-30 14:13:42] 2026-04-30 12:12:34,677 | INFO     | intersect: 2507233.0630914825
[2026-04-30 14:13:42] 2026-04-30 12:12:34,678 | INFO     | chi2: 1.782223566549286
[2026-04-30 14:13:42] 2026-04-30 12:12:34,678 | INFO     | current chi2=1.782223566549286 (change=61.09372581248829 %)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,679 | INFO     | sum of square deviations: 9417545878.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,682 | INFO     | sum of deviations: -22220700275.000004
[2026-04-30 14:13:42] 2026-04-30 12:12:34,682 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,682 | INFO     | mean y: 2512884.3333333335
[2026-04-30 14:13:42] 2026-04-30 12:12:34,682 | INFO     | intersect: 2512884.3333333335
[2026-04-30 14:13:42] 2026-04-30 12:12:34,683 | INFO     | chi2: 1.6298250772466352
[2026-04-30 14:13:42] 2026-04-30 12:12:34,683 | INFO     | current chi2=1.6298250772466352 (change=8.55103097967235 %)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,689 | INFO     | left removable region: 15
[2026-04-30 14:13:42] 2026-04-30 12:12:34,690 | INFO     | sum of square deviations: 8884603792.5
[2026-04-30 14:13:42] 2026-04-30 12:12:34,694 | INFO     | sum of deviations: 19467632018.5
[2026-04-30 14:13:42] 2026-04-30 12:12:34,694 | INFO     | mean x (centered): 0.0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,694 | INFO     | mean y: 2527012.5130718956
[2026-04-30 14:13:42] 2026-04-30 12:12:34,694 | INFO     | intersect: 2527012.5130718956
[2026-04-30 14:13:42] 2026-04-30 12:12:34,695 | INFO     | chi2: 0.03292001345970859
[2026-04-30 14:13:42] 2026-04-30 12:12:34,695 | INFO     | current memory leak: 2.19 B/s (using 306 data points, chi2=0.03)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | ..............................
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . Timing measurements:
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . get job = 0 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . initial setup = 120 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . payload setup = 221 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . stage-in = 0 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,696 | INFO     | . payload execution = 20012 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,697 | INFO     | . stage-out = 3 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,697 | INFO     | . log creation = 1 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,697 | INFO     | ..............................
[2026-04-30 14:13:42] 2026-04-30 12:12:34,930 | INFO     | 
[2026-04-30 14:13:42] 2026-04-30 12:12:34,930 | INFO     | job summary report
[2026-04-30 14:13:42] 2026-04-30 12:12:34,930 | INFO     | --------------------------------------------------
[2026-04-30 14:13:42] 2026-04-30 12:12:34,930 | INFO     | PanDA job id: 7119391967
[2026-04-30 14:13:42] 2026-04-30 12:12:34,930 | INFO     | task id: 49863851
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | errors: (none)
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | pilot state: finished 
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | transexitcode: 0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | exeerrorcode: 0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | exeerrordiag: 
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | exitcode: 0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | exitmsg: OK
[2026-04-30 14:13:42] 2026-04-30 12:12:34,931 | INFO     | cpuconsumptiontime: 85236 s
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | nevents: 400
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | neventsw: 0
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | pid: 30538
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | pgrp: 30538
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | corecount: 8
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | event service: False
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | sizes: {0: 2280081, 1: 2280766, 2: 2281021, 3: 2282623, 13: 2282623, 20238: 2316200, 20242: 2321619, 20244: 2321675, 20245: 2321869}
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | --------------------------------------------------
[2026-04-30 14:13:42] 2026-04-30 12:12:34,932 | INFO     | 
[2026-04-30 14:13:42] 2026-04-30 12:12:34,933 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-30 14:13:42] 2026-04-30 12:12:35,435 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,442 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,442 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,442 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 14:13:42] 2026-04-30 12:12:35,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 14:13:42] 2026-04-30 12:12:35,447 | INFO     | job 7119391967 has completed (purged errors)
[2026-04-30 14:13:42] 2026-04-30 12:12:35,447 | INFO     | overall cleanup function is called
[2026-04-30 14:13:42] 2026-04-30 12:12:35,445 | INFO     | PID=26083 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 14:13:42] 2026-04-30 12:12:35,450 | INFO     | .. there are 2 such processes running
[2026-04-30 14:13:42] 2026-04-30 12:12:36,457 | INFO     | --- collectZombieJob: --- 10, [30538]
[2026-04-30 14:13:42] 2026-04-30 12:12:36,457 | INFO     | zombie collector waiting for pid 30538
[2026-04-30 14:13:42] 2026-04-30 12:12:36,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 14:13:42] 2026-04-30 12:12:36,457 | INFO     | collected zombie processes
[2026-04-30 14:13:42] 2026-04-30 12:12:36,457 | INFO     | will attempt to kill all subprocesses of pid=30538
[2026-04-30 14:13:42] 2026-04-30 12:12:36,515 | INFO     | process IDs to be killed: [30538] (in reverse order)
[2026-04-30 14:13:42] 2026-04-30 12:12:37,563 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 14:13:42] 2026-04-30 12:12:37,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 14:13:42] 2026-04-30 12:12:37,565 | INFO     | did not find any defunct processes belonging to 30538
[2026-04-30 14:13:42] 2026-04-30 12:12:37,567 | INFO     | did not find any defunct processes belonging to 30538
[2026-04-30 14:13:42] 2026-04-30 12:12:37,567 | INFO     | Ready for new job
[2026-04-30 14:13:42] 2026-04-30 12:12:37,569 | INFO     | ***************************************
[2026-04-30 14:13:42] 2026-04-30 12:12:37,570 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 14:13:42] 2026-04-30 12:12:37,570 | INFO     | ***************************************
[2026-04-30 14:13:42] 2026-04-30 12:12:37,570 | INFO     | 
[2026-04-30 14:13:42] 2026-04-30 12:12:37,570 | INFO     | pilot is running in a VM
[2026-04-30 14:13:42] 2026-04-30 12:12:37,571 | INFO     | architecture information:
[2026-04-30 14:13:42] 2026-04-30 12:12:37,580 | INFO     | executing command: cat /etc/os-release
[2026-04-30 14:13:42] 2026-04-30 12:12:37,928 | INFO     | cat /etc/os-release:
[2026-04-30 14:13:42] NAME="CentOS Linux"
[2026-04-30 14:13:42] VERSION="7 (Core)"
[2026-04-30 14:13:42] ID="centos"
[2026-04-30 14:13:42] ID_LIKE="rhel fedora"
[2026-04-30 14:13:42] VERSION_ID="7"
[2026-04-30 14:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 14:13:42] ANSI_COLOR="0;31"
[2026-04-30 14:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 14:13:42] HOME_URL="https://www.centos.org/"
[2026-04-30 14:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 14:13:42] 
[2026-04-30 14:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 14:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 14:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 14:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 14:13:42] 
[2026-04-30 14:13:42] 2026-04-30 12:12:37,928 | INFO     | ***************************************
[2026-04-30 14:13:42] 2026-04-30 12:12:38,432 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-30 14:13:42] 2026-04-30 12:12:38,702 | INFO     | sufficient remaining disk space (496824745984 B)
[2026-04-30 14:13:42] 2026-04-30 12:12:38,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 14:13:42] 2026-04-30 12:12:38,702 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 14:13:42] 2026-04-30 12:12:38,703 | INFO     | update_server=False
[2026-04-30 14:13:42] 2026-04-30 12:12:38,703 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 14:13:42] 2026-04-30 12:12:38,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 14:13:42] 2026-04-30 12:12:38,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 14:13:42] 2026-04-30 12:12:38,704 | INFO     | aborting loop
[2026-04-30 14:13:42] 2026-04-30 12:12:38,867 | INFO     | all data control threads have been joined
[2026-04-30 14:13:42] 2026-04-30 12:12:39,058 | INFO     | all job control threads have been joined
[2026-04-30 14:13:42] 2026-04-30 12:12:39,708 | INFO     | [job] retrieve thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:39,710 | INFO     | [job] job monitor thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:39,873 | INFO     | [data] control thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:39,895 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:39,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 14:13:42] 2026-04-30 12:12:40,064 | INFO     | [job] control thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,110 | INFO     | [data] copytool_in thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,112 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,116 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,131 | INFO     | all payload control threads have been joined
[2026-04-30 14:13:42] 2026-04-30 12:12:40,255 | INFO     | [payload] failed_post thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,296 | INFO     | [job] validate thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 14:13:42] 2026-04-30 12:12:40,710 | INFO     | [data] copytool_out thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,741 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,951 | INFO     | [payload] validate_post thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:40,956 | INFO     | [job] queue monitor thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:41,137 | INFO     | [payload] control thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:12:44,644 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 14:13:42] 2026-04-30 12:13:07,573 | INFO     | PID=26083 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 14:13:42] 2026-04-30 12:13:07,573 | INFO     | .. there are 2 such processes running
[2026-04-30 14:13:42] 2026-04-30 12:13:07,580 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 14:13:42] 2026-04-30 12:13:07,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 14:13:42] 2026-04-30 12:13:07,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 14:13:42] 2026-04-30 12:13:31,559 | INFO     | [monitor] cgroup control has ended
[2026-04-30 14:13:42] 2026-04-30 12:13:32,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454816204608)>', '<ExcThread(monitor, started 140454515418880)>']
[2026-04-30 14:13:42] 2026-04-30 12:13:32,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 14:13:42] 2026-04-30 12:13:32,731 | INFO     | [monitor] control thread has ended
[2026-04-30 14:13:42] 2026-04-30 12:13:37,327 | INFO     | all workflow threads have been joined
[2026-04-30 14:13:42] 2026-04-30 12:13:37,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 14:13:42] 2026-04-30 12:13:37,328 | INFO     | traces error code: 0
[2026-04-30 14:13:42] 2026-04-30 12:13:37,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 14:13:42] 2026-04-30 12:13:37,749 [wrapper] ==== pilot stdout END ====
[2026-04-30 14:13:42] 2026-04-30 12:13:37,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 14:13:42] 2026-04-30 12:13:37,931 [wrapper] pilotpid: 26083
[2026-04-30 14:13:42] 2026-04-30 12:13:38,015 [wrapper] Pilot exit status: 0
[2026-04-30 14:13:42] 2026-04-30 12:13:38,544 [wrapper] pandaids: 7119391967
[2026-04-30 14:13:42] 2026-04-30 12:13:39,280 [wrapper] cleanup supervisor_pilot 21162 26084
[2026-04-30 14:13:42] 2026-04-30 12:13:39,403 [wrapper] Test setup, not cleaning
[2026-04-30 14:13:42] 2026-04-30 12:13:39,528 [wrapper] apfmon messages muted
[2026-04-30 14:13:42] 2026-04-30 12:13:39,598 [wrapper] ==== wrapper stdout END ====
[2026-04-30 14:13:42] 2026-04-30 12:13:39,698 [wrapper] ==== wrapper stderr END ====
[2026-04-30 14:13:42]  *** Error codes and diagnostics ***
[2026-04-30 14:13:42]     "exeErrorCode": 0,
[2026-04-30 14:13:42]     "pilotErrorCode": 0,
[2026-04-30 14:13:42]  *** Listing of results directory ***
[2026-04-30 14:13:42] total 470924
[2026-04-30 14:13:42] -rwx------. 1 boinc boinc     36322 Apr 29 21:43 runpilot2-wrapper.sh
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc    683926 Apr 30 08:14 pilot3.tar.gz
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc      5631 Apr 30 08:27 queuedata.json
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc       100 Apr 30 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 14:13:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 08:28 run_atlas
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc       105 Apr 30 08:28 job.xml
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc      6306 Apr 30 08:28 init_data.xml
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc 259020118 Apr 30 08:28 EVNT.49863848._000201.pool.root.1
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc     15667 Apr 30 08:28 start_atlas.sh
[2026-04-30 14:13:42] drwxrwx--x. 2 boinc boinc        68 Apr 30 08:28 shared
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc    697438 Apr 30 08:28 input.tar.gz
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc         0 Apr 30 08:28 boinc_lockfile
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc      2650 Apr 30 08:28 pandaJob.out
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc       415 Apr 30 08:34 workernode_map.json
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc   1001870 Apr 30 08:34 agis_schedconf.cvmfs.json
[2026-04-30 14:13:42] drwx------. 5 boinc boinc      4096 Apr 30 08:34 pilot3
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc 214427715 Apr 30 14:11 HITS.49863851._004954.pool.root.1
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc       489 Apr 30 14:11 boinc_task_state.xml
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc      1021 Apr 30 14:12 memory_monitor_summary.json
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc   1510841 Apr 30 14:12 agis_ddmendpoints.agis.ALL.json
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc    452243 Apr 30 14:12 log.49863851._004954.job.log.tgz.1
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc      6343 Apr 30 14:12 heartbeat_new.json
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc      6234 Apr 30 14:12 heartbeat.json
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc        95 Apr 30 14:13 pilot_heartbeat.json
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc      8192 Apr 30 14:13 boinc_mmap_file
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc        28 Apr 30 14:13 wrapper_checkpoint.txt
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc      4883 Apr 30 14:13 pilotlog.txt
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc   1875731 Apr 30 14:13 log.49863851._004954.job.log.1
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc       357 Apr 30 14:13 output.list
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc       410 Apr 30 14:13 runtime_log
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc   2344960 Apr 30 14:13 result.tar.gz
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc      8439 Apr 30 14:13 runtime_log.err
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc       656 Apr 30 14:13 5f6b888c654f.diag
[2026-04-30 14:13:42] -rw-r--r--. 1 boinc boinc     20735 Apr 30 14:13 stderr.txt
[2026-04-30 14:13:42] HITS file was successfully produced:
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc 214427715 Apr 30 14:11 shared/HITS.pool.root.1
[2026-04-30 14:13:42]  *** Contents of shared directory: ***
[2026-04-30 14:13:42] total 465348
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc 259020118 Apr 30 08:28 ATLAS.root_0
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc     15667 Apr 30 08:28 start_atlas.sh
[2026-04-30 14:13:42] -rw-r--r--. 2 boinc boinc    697438 Apr 30 08:28 input.tar.gz
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc 214427715 Apr 30 14:11 HITS.pool.root.1
[2026-04-30 14:13:42] -rw-------. 1 boinc boinc   2344960 Apr 30 14:13 result.tar.gz
14:13:43 (22033): run_atlas exited; CPU time 85429.492725
14:13:43 (22033): called boinc_finish(0)

</stderr_txt>
]]>

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