Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:37 (5857): wrapper (7.7.26015): starting
20:46:37 (5857): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 20:46:37] Arguments: --nthreads 8
[2026-04-30 20:46:37] Threads: 8
[2026-04-30 20:46:37] Checking for CVMFS
[2026-04-30 20:46:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 20:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 20:46:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 20:46:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 20:46:42] 2.11.2.0 21071 21702 100968 159061 0 53 22657768 25165825 96 130560 0 7231701 99.934 5271223 8682 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 20:46:42] CVMFS is ok
[2026-04-30 20:46:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 20:46:42] Checking for apptainer binary...
[2026-04-30 20:46:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 20:46:42] Running /usr/bin/apptainer --version
[2026-04-30 20:46:42] apptainer version 1.3.2-1.el7
[2026-04-30 20:46:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 20:46:59] cg-vwn360.simple-grid.lan
[2026-04-30 20:46:59] apptainer works
[2026-04-30 20:46:59] Set ATHENA_PROC_NUMBER=8
[2026-04-30 20:46:59] Set ATHENA_CORE_NUMBER=8
[2026-04-30 20:46:59] Starting ATLAS job with PandaID=7119392030
[2026-04-30 20:46:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 03:19:26]  *** The last 200 lines of the pilot log: ***
[2026-05-01 03:19:26] 2026-05-01 01:18:21,572 | INFO     | this job has now completed (state=finished)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,572 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,572 | INFO     | log transfer has been attempted: DONE
[2026-05-01 03:19:26] 2026-05-01 01:18:21,573 | INFO     | job 7119392030 has finished - writing final server update
[2026-05-01 03:19:26] 2026-05-01 01:18:21,573 | INFO     | total number of processed events: 400 (read)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,575 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7119392030/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,576 | INFO     | extracted standard info from prmon json
[2026-05-01 03:19:26] 2026-05-01 01:18:21,576 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 03:19:26] 2026-05-01 01:18:21,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 03:19:26] 2026-05-01 01:18:21,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 03:19:26] 2026-05-01 01:18:21,585 | INFO     | fitting pss+swap vs Time
[2026-05-01 03:19:26] 2026-05-01 01:18:21,585 | INFO     | sum of square deviations: 16091695202.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,590 | INFO     | sum of deviations: 194627857454.00003
[2026-05-01 03:19:26] 2026-05-01 01:18:21,593 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,593 | INFO     | mean y: 2474519.8337801606
[2026-05-01 03:19:26] 2026-05-01 01:18:21,594 | INFO     | intersect: 2474519.8337801606
[2026-05-01 03:19:26] 2026-05-01 01:18:21,594 | INFO     | chi2: 7.479152858347659
[2026-05-01 03:19:26] 2026-05-01 01:18:21,595 | INFO     | sum of square deviations: 15453208812.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,599 | INFO     | sum of deviations: 216590879790.5
[2026-05-01 03:19:26] 2026-05-01 01:18:21,599 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,600 | INFO     | mean y: 2479700.4375
[2026-05-01 03:19:26] 2026-05-01 01:18:21,600 | INFO     | intersect: 2479700.4375
[2026-05-01 03:19:26] 2026-05-01 01:18:21,600 | INFO     | chi2: 6.744720749733974
[2026-05-01 03:19:26] 2026-05-01 01:18:21,600 | INFO     | current chi2=6.744720749733974 (change=9.819723202928902 %)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,601 | INFO     | right removable region: 367
[2026-05-01 03:19:26] 2026-05-01 01:18:21,601 | INFO     | sum of square deviations: 15453208812.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,606 | INFO     | sum of deviations: 62839800595.500015
[2026-05-01 03:19:26] 2026-05-01 01:18:21,606 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,606 | INFO     | mean y: 2505981.1929347827
[2026-05-01 03:19:26] 2026-05-01 01:18:21,606 | INFO     | intersect: 2505981.1929347827
[2026-05-01 03:19:26] 2026-05-01 01:18:21,607 | INFO     | chi2: 2.73083665589908
[2026-05-01 03:19:26] 2026-05-01 01:18:21,607 | INFO     | current chi2=2.73083665589908 (change=63.48735334575856 %)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,607 | INFO     | sum of square deviations: 14831839022.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,612 | INFO     | sum of deviations: -17452136966.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,612 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,612 | INFO     | mean y: 2525639.856749311
[2026-05-01 03:19:26] 2026-05-01 01:18:21,612 | INFO     | intersect: 2525639.856749311
[2026-05-01 03:19:26] 2026-05-01 01:18:21,613 | INFO     | chi2: 0.8872277968354207
[2026-05-01 03:19:26] 2026-05-01 01:18:21,613 | INFO     | current chi2=0.8872277968354207 (change=67.51077019129448 %)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,614 | INFO     | sum of square deviations: 14227353269.5
[2026-05-01 03:19:26] 2026-05-01 01:18:21,622 | INFO     | sum of deviations: -26790390926.5
[2026-05-01 03:19:26] 2026-05-01 01:18:21,622 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,622 | INFO     | mean y: 2527986.6117318436
[2026-05-01 03:19:26] 2026-05-01 01:18:21,623 | INFO     | intersect: 2527986.6117318436
[2026-05-01 03:19:26] 2026-05-01 01:18:21,623 | INFO     | chi2: 0.8550936647806353
[2026-05-01 03:19:26] 2026-05-01 01:18:21,623 | INFO     | current chi2=0.8550936647806353 (change=3.6218581258840183 %)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,623 | INFO     | left removable region: 15
[2026-05-01 03:19:26] 2026-05-01 01:18:21,624 | INFO     | sum of square deviations: 13523929848.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,628 | INFO     | sum of deviations: -2872225778.500002
[2026-05-01 03:19:26] 2026-05-01 01:18:21,628 | INFO     | mean x (centered): 0.0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,629 | INFO     | mean y: 2534120.4857954546
[2026-05-01 03:19:26] 2026-05-01 01:18:21,629 | INFO     | intersect: 2534120.4857954546
[2026-05-01 03:19:26] 2026-05-01 01:18:21,629 | INFO     | chi2: 0.06864306353664128
[2026-05-01 03:19:26] 2026-05-01 01:18:21,629 | INFO     | current memory leak: -0.21 B/s (using 352 data points, chi2=0.07)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,630 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | ..............................
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . Timing measurements:
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . get job = 0 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . initial setup = 125 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . payload setup = 167 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . stage-in = 0 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . payload execution = 22886 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . stage-out = 8 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | . log creation = 1 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,631 | INFO     | ..............................
[2026-05-01 03:19:26] 2026-05-01 01:18:21,779 | INFO     | 
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | job summary report
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | --------------------------------------------------
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | PanDA job id: 7119392030
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | task id: 49863851
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | errors: (none)
[2026-05-01 03:19:26] 2026-05-01 01:18:21,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | pilot state: finished 
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | transexitcode: 0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | exeerrorcode: 0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | exeerrordiag: 
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | exitcode: 0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | exitmsg: OK
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | cpuconsumptiontime: 87784 s
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | nevents: 400
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | neventsw: 0
[2026-05-01 03:19:26] 2026-05-01 01:18:21,781 | INFO     | pid: 14301
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | pgrp: 14301
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | corecount: 8
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | event service: False
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | sizes: {0: 2275952, 1: 2276864, 2: 2278438, 13: 2278466, 23058: 2313175, 23067: 2322173, 23069: 2322357, 23072: 2322551}
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | --------------------------------------------------
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | 
[2026-05-01 03:19:26] 2026-05-01 01:18:21,782 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-01 03:19:26] 2026-05-01 01:18:22,185 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,185 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 03:19:26] 2026-05-01 01:18:22,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 03:19:26] 2026-05-01 01:18:22,188 | INFO     | job 7119392030 has completed (purged errors)
[2026-05-01 03:19:26] 2026-05-01 01:18:22,188 | INFO     | overall cleanup function is called
[2026-05-01 03:19:26] 2026-05-01 01:18:23,196 | INFO     | --- collectZombieJob: --- 10, [14301]
[2026-05-01 03:19:26] 2026-05-01 01:18:23,197 | INFO     | zombie collector waiting for pid 14301
[2026-05-01 03:19:26] 2026-05-01 01:18:23,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 03:19:26] 2026-05-01 01:18:23,197 | INFO     | collected zombie processes
[2026-05-01 03:19:26] 2026-05-01 01:18:23,197 | INFO     | will attempt to kill all subprocesses of pid=14301
[2026-05-01 03:19:26] 2026-05-01 01:18:23,261 | INFO     | process IDs to be killed: [14301] (in reverse order)
[2026-05-01 03:19:26] 2026-05-01 01:18:24,206 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 03:19:26] 2026-05-01 01:18:24,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 03:19:26] 2026-05-01 01:18:24,209 | INFO     | did not find any defunct processes belonging to 14301
[2026-05-01 03:19:26] 2026-05-01 01:18:24,210 | INFO     | did not find any defunct processes belonging to 14301
[2026-05-01 03:19:26] 2026-05-01 01:18:24,211 | INFO     | Ready for new job
[2026-05-01 03:19:26] 2026-05-01 01:18:24,218 | INFO     | ***************************************
[2026-05-01 03:19:26] 2026-05-01 01:18:24,219 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 03:19:26] 2026-05-01 01:18:24,219 | INFO     | ***************************************
[2026-05-01 03:19:26] 2026-05-01 01:18:24,219 | INFO     | 
[2026-05-01 03:19:26] 2026-05-01 01:18:24,219 | INFO     | pilot is running in a VM
[2026-05-01 03:19:26] 2026-05-01 01:18:24,220 | INFO     | architecture information:
[2026-05-01 03:19:26] 2026-05-01 01:18:24,229 | INFO     | executing command: cat /etc/os-release
[2026-05-01 03:19:26] 2026-05-01 01:18:24,469 | INFO     | cat /etc/os-release:
[2026-05-01 03:19:26] NAME="CentOS Linux"
[2026-05-01 03:19:26] VERSION="7 (Core)"
[2026-05-01 03:19:26] ID="centos"
[2026-05-01 03:19:26] ID_LIKE="rhel fedora"
[2026-05-01 03:19:26] VERSION_ID="7"
[2026-05-01 03:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 03:19:26] ANSI_COLOR="0;31"
[2026-05-01 03:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 03:19:26] HOME_URL="https://www.centos.org/"
[2026-05-01 03:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 03:19:26] 
[2026-05-01 03:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 03:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 03:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 03:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 03:19:26] 
[2026-05-01 03:19:26] 2026-05-01 01:18:24,469 | INFO     | ***************************************
[2026-05-01 03:19:26] 2026-05-01 01:18:24,973 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-01 03:19:26] 2026-05-01 01:18:25,223 | INFO     | sufficient remaining disk space (496153657344 B)
[2026-05-01 03:19:26] 2026-05-01 01:18:25,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 03:19:26] 2026-05-01 01:18:25,224 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 03:19:26] 2026-05-01 01:18:25,224 | INFO     | update_server=False
[2026-05-01 03:19:26] 2026-05-01 01:18:25,224 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 03:19:26] 2026-05-01 01:18:25,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 03:19:26] 2026-05-01 01:18:25,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 03:19:26] 2026-05-01 01:18:25,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 03:19:26] 2026-05-01 01:18:25,246 | INFO     | aborting loop
[2026-05-01 03:19:26] 2026-05-01 01:18:25,446 | INFO     | all job control threads have been joined
[2026-05-01 03:19:26] 2026-05-01 01:18:25,502 | INFO     | all payload control threads have been joined
[2026-05-01 03:19:26] 2026-05-01 01:18:25,765 | INFO     | all data control threads have been joined
[2026-05-01 03:19:26] 2026-05-01 01:18:26,229 | INFO     | [job] retrieve thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,252 | INFO     | [job] job monitor thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,293 | INFO     | [job] validate thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,452 | INFO     | [job] control thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,508 | INFO     | [payload] control thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,565 | INFO     | [payload] failed_post thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,672 | INFO     | [data] copytool_in thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,771 | INFO     | [data] control thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:26,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 03:19:26] 2026-05-01 01:18:27,207 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,210 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,232 | INFO     | [data] copytool_out thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,258 | INFO     | [payload] validate_post thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,398 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,532 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:27,801 | INFO     | [job] queue monitor thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:29,234 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 03:19:26] 2026-05-01 01:18:54,919 | INFO     | PID=9832 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-01 03:19:26] 2026-05-01 01:18:54,919 | INFO     | .. there are 2 such processes running
[2026-05-01 03:19:26] 2026-05-01 01:18:54,926 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 03:19:26] 2026-05-01 01:18:54,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 03:19:26] 2026-05-01 01:18:54,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 03:19:26] 2026-05-01 01:19:15,819 | INFO     | [monitor] cgroup control has ended
[2026-05-01 03:19:26] 2026-05-01 01:19:16,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514944235328)>', '<ExcThread(monitor, started 140514217162496)>']
[2026-05-01 03:19:26] 2026-05-01 01:19:17,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 03:19:26] 2026-05-01 01:19:17,059 | INFO     | [monitor] control thread has ended
[2026-05-01 03:19:26] 2026-05-01 01:19:21,239 | INFO     | all workflow threads have been joined
[2026-05-01 03:19:26] 2026-05-01 01:19:21,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 03:19:26] 2026-05-01 01:19:21,240 | INFO     | traces error code: 0
[2026-05-01 03:19:26] 2026-05-01 01:19:21,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 03:19:26] 2026-05-01 01:19:21,661 [wrapper] ==== pilot stdout END ====
[2026-05-01 03:19:26] 2026-05-01 01:19:21,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 03:19:26] 2026-05-01 01:19:21,885 [wrapper] pilotpid: 9832
[2026-05-01 03:19:26] 2026-05-01 01:19:22,004 [wrapper] Pilot exit status: 0
[2026-05-01 03:19:26] 2026-05-01 01:19:22,542 [wrapper] pandaids: 7119392030
[2026-05-01 03:19:26] 2026-05-01 01:19:23,696 [wrapper] cleanup supervisor_pilot 22662 9833
[2026-05-01 03:19:26] 2026-05-01 01:19:23,804 [wrapper] Test setup, not cleaning
[2026-05-01 03:19:26] 2026-05-01 01:19:23,850 [wrapper] apfmon messages muted
[2026-05-01 03:19:26] 2026-05-01 01:19:23,965 [wrapper] ==== wrapper stdout END ====
[2026-05-01 03:19:26] 2026-05-01 01:19:24,063 [wrapper] ==== wrapper stderr END ====
[2026-05-01 03:19:26]  *** Error codes and diagnostics ***
[2026-05-01 03:19:26]     "exeErrorCode": 0,
[2026-05-01 03:19:26]     "pilotErrorCode": 0,
[2026-05-01 03:19:26]  *** Listing of results directory ***
[2026-05-01 03:19:26] total 473964
[2026-05-01 03:19:26] -rwx------. 1 boinc boinc     36322 Apr 29 21:43 runpilot2-wrapper.sh
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc    683926 Apr 30 08:14 pilot3.tar.gz
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc      5631 Apr 30 08:27 queuedata.json
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc       100 Apr 30 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 03:19:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 20:46 run_atlas
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc       105 Apr 30 20:46 job.xml
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc      6306 Apr 30 20:46 init_data.xml
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc 258114692 Apr 30 20:46 EVNT.49863848._000212.pool.root.1
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc     15667 Apr 30 20:46 start_atlas.sh
[2026-05-01 03:19:26] drwxrwx--x. 2 boinc boinc        68 Apr 30 20:46 shared
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc    697442 Apr 30 20:46 input.tar.gz
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc         0 Apr 30 20:46 boinc_lockfile
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc      2650 Apr 30 20:46 pandaJob.out
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc       415 Apr 30 20:53 workernode_map.json
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc    997586 Apr 30 20:53 agis_schedconf.cvmfs.json
[2026-05-01 03:19:26] drwx------. 5 boinc boinc      4096 Apr 30 20:53 pilot3
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc 217897921 May  1 03:16 HITS.49863851._005017.pool.root.1
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc       489 May  1 03:16 boinc_task_state.xml
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc      1011 May  1 03:18 memory_monitor_summary.json
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc   1510091 May  1 03:18 agis_ddmendpoints.agis.ALL.json
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc    464031 May  1 03:18 log.49863851._005017.job.log.tgz.1
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc      6332 May  1 03:18 heartbeat_new.json
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc      6223 May  1 03:18 heartbeat.json
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc        95 May  1 03:18 pilot_heartbeat.json
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc      8192 May  1 03:19 boinc_mmap_file
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc        28 May  1 03:19 wrapper_checkpoint.txt
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc      4882 May  1 03:19 pilotlog.txt
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc   2141489 May  1 03:19 log.49863851._005017.job.log.1
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc       357 May  1 03:19 output.list
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc       410 May  1 03:19 runtime_log
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc   2621440 May  1 03:19 result.tar.gz
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc      8439 May  1 03:19 runtime_log.err
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc       656 May  1 03:19 5f6ba52822cf.diag
[2026-05-01 03:19:26] -rw-r--r--. 1 boinc boinc     20628 May  1 03:19 stderr.txt
[2026-05-01 03:19:26] HITS file was successfully produced:
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc 217897921 May  1 03:16 shared/HITS.pool.root.1
[2026-05-01 03:19:26]  *** Contents of shared directory: ***
[2026-05-01 03:19:26] total 468120
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc 258114692 Apr 30 20:46 ATLAS.root_0
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc     15667 Apr 30 20:46 start_atlas.sh
[2026-05-01 03:19:26] -rw-r--r--. 2 boinc boinc    697442 Apr 30 20:46 input.tar.gz
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc 217897921 May  1 03:16 HITS.pool.root.1
[2026-05-01 03:19:26] -rw-------. 1 boinc boinc   2621440 May  1 03:19 result.tar.gz
03:19:28 (5857): run_atlas exited; CPU time 88017.845579
03:19:28 (5857): called boinc_finish(0)

</stderr_txt>
]]>

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