Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:17:00 (29881): wrapper (7.7.26015): starting
06:17:00 (29881): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 06:17:00] Arguments: --nthreads 8
[2026-04-30 06:17:00] Threads: 8
[2026-04-30 06:17:00] Checking for CVMFS
[2026-04-30 06:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 06:17:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 06:17:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 06:17:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 06:17:08] 2.11.2.0 2379 20830 99920 159032 2 11 19049277 25165825 96 130560 0 7084057 99.873 2957460 4277 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 06:17:08] CVMFS is ok
[2026-04-30 06:17:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 06:17:08] Checking for apptainer binary...
[2026-04-30 06:17:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 06:17:08] Running /usr/bin/apptainer --version
[2026-04-30 06:17:08] apptainer version 1.3.2-1.el7
[2026-04-30 06:17:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 06:17:26] cg-vwn406.simple-grid.lan
[2026-04-30 06:17:26] apptainer works
[2026-04-30 06:17:26] Set ATHENA_PROC_NUMBER=8
[2026-04-30 06:17:26] Set ATHENA_CORE_NUMBER=8
[2026-04-30 06:17:26] Starting ATLAS job with PandaID=7119348670
[2026-04-30 06:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 12:10:09]  *** The last 200 lines of the pilot log: ***
[2026-04-30 12:10:09] 2026-04-30 10:08:57,436 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 12:10:09] 2026-04-30 10:08:57,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 12:10:09] 2026-04-30 10:08:57,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 12:10:09] 2026-04-30 10:08:57,443 | INFO     | fitting pss+swap vs Time
[2026-04-30 12:10:09] 2026-04-30 10:08:57,444 | INFO     | sum of square deviations: 11553509647.5
[2026-04-30 12:10:09] 2026-04-30 10:08:57,456 | INFO     | sum of deviations: 186175400902.5
[2026-04-30 12:10:09] 2026-04-30 10:08:57,457 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,457 | INFO     | mean y: 2464715.643712575
[2026-04-30 12:10:09] 2026-04-30 10:08:57,457 | INFO     | intersect: 2464715.643712575
[2026-04-30 12:10:09] 2026-04-30 10:08:57,458 | INFO     | chi2: 10.679771197519054
[2026-04-30 12:10:09] 2026-04-30 10:08:57,458 | INFO     | sum of square deviations: 11042365180.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,462 | INFO     | sum of deviations: 205515847982.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,462 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,462 | INFO     | mean y: 2470404.9787234045
[2026-04-30 12:10:09] 2026-04-30 10:08:57,462 | INFO     | intersect: 2470404.9787234045
[2026-04-30 12:10:09] 2026-04-30 10:08:57,463 | INFO     | chi2: 9.989373142022806
[2026-04-30 12:10:09] 2026-04-30 10:08:57,463 | INFO     | current chi2=9.989373142022806 (change=6.464539761456963 %)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,463 | INFO     | right removable region: 328
[2026-04-30 12:10:09] 2026-04-30 10:08:57,464 | INFO     | sum of square deviations: 11042365180.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,468 | INFO     | sum of deviations: 61173628265.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,468 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,468 | INFO     | mean y: 2502011.9817629177
[2026-04-30 12:10:09] 2026-04-30 10:08:57,468 | INFO     | intersect: 2502011.9817629177
[2026-04-30 12:10:09] 2026-04-30 10:08:57,469 | INFO     | chi2: 4.999513527651401
[2026-04-30 12:10:09] 2026-04-30 10:08:57,469 | INFO     | current chi2=4.999513527651401 (change=53.18707268922761 %)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,469 | INFO     | sum of square deviations: 10546523325.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,473 | INFO     | sum of deviations: -40616821818.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,473 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,473 | INFO     | mean y: 2533282.462962963
[2026-04-30 12:10:09] 2026-04-30 10:08:57,474 | INFO     | intersect: 2533282.462962963
[2026-04-30 12:10:09] 2026-04-30 10:08:57,474 | INFO     | chi2: 1.4536757683478716
[2026-04-30 12:10:09] 2026-04-30 10:08:57,474 | INFO     | current chi2=1.4536757683478716 (change=70.92365566553916 %)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,475 | INFO     | sum of square deviations: 10065751520.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,478 | INFO     | sum of deviations: -68938377679.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,479 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,479 | INFO     | mean y: 2542207.5454545454
[2026-04-30 12:10:09] 2026-04-30 10:08:57,479 | INFO     | intersect: 2542207.5454545454
[2026-04-30 12:10:09] 2026-04-30 10:08:57,480 | INFO     | chi2: 0.9854751938137579
[2026-04-30 12:10:09] 2026-04-30 10:08:57,480 | INFO     | current chi2=0.9854751938137579 (change=32.208046988788425 %)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,480 | INFO     | sum of square deviations: 9599817202.5
[2026-04-30 12:10:09] 2026-04-30 10:08:57,484 | INFO     | sum of deviations: -63466059627.000015
[2026-04-30 12:10:09] 2026-04-30 10:08:57,484 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,484 | INFO     | mean y: 2540403.7515923567
[2026-04-30 12:10:09] 2026-04-30 10:08:57,484 | INFO     | intersect: 2540403.7515923567
[2026-04-30 12:10:09] 2026-04-30 10:08:57,485 | INFO     | chi2: 0.9728114969746227
[2026-04-30 12:10:09] 2026-04-30 10:08:57,485 | INFO     | current chi2=0.9728114969746227 (change=1.285034561867271 %)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,485 | INFO     | left removable region: 20
[2026-04-30 12:10:09] 2026-04-30 10:08:57,486 | INFO     | sum of square deviations: 9059954057.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,489 | INFO     | sum of deviations: -41529429581.00001
[2026-04-30 12:10:09] 2026-04-30 10:08:57,489 | INFO     | mean x (centered): 0.0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,489 | INFO     | mean y: 2547725.2077922076
[2026-04-30 12:10:09] 2026-04-30 10:08:57,489 | INFO     | intersect: 2547725.2077922076
[2026-04-30 12:10:09] 2026-04-30 10:08:57,490 | INFO     | chi2: 0.1876702649349359
[2026-04-30 12:10:09] 2026-04-30 10:08:57,490 | INFO     | current memory leak: -4.58 B/s (using 308 data points, chi2=0.19)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,491 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,491 | INFO     | ..............................
[2026-04-30 12:10:09] 2026-04-30 10:08:57,491 | INFO     | . Timing measurements:
[2026-04-30 12:10:09] 2026-04-30 10:08:57,491 | INFO     | . get job = 0 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . initial setup = 111 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . payload setup = 249 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . stage-in = 0 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . payload execution = 20461 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . stage-out = 3 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | . log creation = 1 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,492 | INFO     | ..............................
[2026-04-30 12:10:09] 2026-04-30 10:08:57,954 | INFO     | 
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | job summary report
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | --------------------------------------------------
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | PanDA job id: 7119348670
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | task id: 49863840
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | errors: (none)
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | pilot state: finished 
[2026-04-30 12:10:09] 2026-04-30 10:08:57,955 | INFO     | transexitcode: 0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | exeerrorcode: 0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | exeerrordiag: 
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | exitcode: 0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | exitmsg: OK
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | cpuconsumptiontime: 78048 s
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | nevents: 400
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | neventsw: 0
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | pid: 6020
[2026-04-30 12:10:09] 2026-04-30 10:08:57,956 | INFO     | pgrp: 6020
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | corecount: 8
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | event service: False
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | sizes: {0: 2280072, 1: 2281130, 2: 2282558, 12: 2282586, 20715: 2316190, 20719: 2321793, 20722: 2321931}
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | --------------------------------------------------
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | 
[2026-04-30 12:10:09] 2026-04-30 10:08:57,957 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-04-30 12:10:09] 2026-04-30 10:08:58,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,554 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,554 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,554 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | job 7119348670 has completed (purged errors)
[2026-04-30 12:10:09] 2026-04-30 10:08:58,556 | INFO     | overall cleanup function is called
[2026-04-30 12:10:09] 2026-04-30 10:08:59,565 | INFO     | --- collectZombieJob: --- 10, [6020]
[2026-04-30 12:10:09] 2026-04-30 10:08:59,566 | INFO     | zombie collector waiting for pid 6020
[2026-04-30 12:10:09] 2026-04-30 10:08:59,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 12:10:09] 2026-04-30 10:08:59,566 | INFO     | collected zombie processes
[2026-04-30 12:10:09] 2026-04-30 10:08:59,566 | INFO     | will attempt to kill all subprocesses of pid=6020
[2026-04-30 12:10:09] 2026-04-30 10:08:59,631 | INFO     | process IDs to be killed: [6020] (in reverse order)
[2026-04-30 12:10:09] 2026-04-30 10:09:00,541 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 12:10:09] 2026-04-30 10:09:00,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 12:10:09] 2026-04-30 10:09:00,543 | INFO     | did not find any defunct processes belonging to 6020
[2026-04-30 12:10:09] 2026-04-30 10:09:00,545 | INFO     | did not find any defunct processes belonging to 6020
[2026-04-30 12:10:09] 2026-04-30 10:09:00,545 | INFO     | Ready for new job
[2026-04-30 12:10:09] 2026-04-30 10:09:00,547 | INFO     | ***************************************
[2026-04-30 12:10:09] 2026-04-30 10:09:00,547 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 12:10:09] 2026-04-30 10:09:00,547 | INFO     | ***************************************
[2026-04-30 12:10:09] 2026-04-30 10:09:00,548 | INFO     | 
[2026-04-30 12:10:09] 2026-04-30 10:09:00,548 | INFO     | pilot is running in a VM
[2026-04-30 12:10:09] 2026-04-30 10:09:00,548 | INFO     | architecture information:
[2026-04-30 12:10:09] 2026-04-30 10:09:00,557 | INFO     | executing command: cat /etc/os-release
[2026-04-30 12:10:09] 2026-04-30 10:09:00,747 | INFO     | cat /etc/os-release:
[2026-04-30 12:10:09] NAME="CentOS Linux"
[2026-04-30 12:10:09] VERSION="7 (Core)"
[2026-04-30 12:10:09] ID="centos"
[2026-04-30 12:10:09] ID_LIKE="rhel fedora"
[2026-04-30 12:10:09] VERSION_ID="7"
[2026-04-30 12:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 12:10:09] ANSI_COLOR="0;31"
[2026-04-30 12:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 12:10:09] HOME_URL="https://www.centos.org/"
[2026-04-30 12:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 12:10:09] 
[2026-04-30 12:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 12:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 12:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 12:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 12:10:09] 
[2026-04-30 12:10:09] 2026-04-30 10:09:00,748 | INFO     | ***************************************
[2026-04-30 12:10:09] 2026-04-30 10:09:01,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-04-30 12:10:09] 2026-04-30 10:09:01,488 | INFO     | sufficient remaining disk space (496138977280 B)
[2026-04-30 12:10:09] 2026-04-30 10:09:01,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 12:10:09] 2026-04-30 10:09:01,489 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 12:10:09] 2026-04-30 10:09:01,489 | INFO     | update_server=False
[2026-04-30 12:10:09] 2026-04-30 10:09:01,489 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 12:10:09] 2026-04-30 10:09:01,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 12:10:09] 2026-04-30 10:09:01,717 | INFO     | all data control threads have been joined
[2026-04-30 12:10:09] 2026-04-30 10:09:01,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 12:10:09] 2026-04-30 10:09:01,966 | INFO     | aborting loop
[2026-04-30 12:10:09] 2026-04-30 10:09:02,434 | INFO     | all job control threads have been joined
[2026-04-30 12:10:09] 2026-04-30 10:09:02,495 | INFO     | [job] retrieve thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:02,573 | INFO     | all payload control threads have been joined
[2026-04-30 12:10:09] 2026-04-30 10:09:02,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 12:10:09] 2026-04-30 10:09:02,724 | INFO     | [data] control thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:02,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 12:10:09] 2026-04-30 10:09:02,973 | INFO     | [job] job monitor thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,200 | INFO     | [payload] validate_post thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,443 | INFO     | [job] control thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,483 | INFO     | [data] copytool_in thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,567 | INFO     | [payload] failed_post thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,579 | INFO     | [payload] control thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,674 | INFO     | [job] queue monitor thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,735 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,744 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,795 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,819 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:03,919 | INFO     | [job] validate thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:04,920 | INFO     | [data] copytool_out thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:05,498 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 12:10:09] 2026-04-30 10:09:31,331 | INFO     | PID=1524 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-30 12:10:09] 2026-04-30 10:09:31,331 | INFO     | .. there are 2 such processes running
[2026-04-30 12:10:09] 2026-04-30 10:09:31,331 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 12:10:09] 2026-04-30 10:09:31,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 12:10:09] 2026-04-30 10:09:31,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 12:10:09] 2026-04-30 10:09:58,709 | INFO     | [monitor] cgroup control has ended
[2026-04-30 12:10:09] 2026-04-30 10:09:58,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626047190848)>', '<ExcThread(monitor, started 139625494476544)>']
[2026-04-30 12:10:09] 2026-04-30 10:09:59,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 12:10:09] 2026-04-30 10:09:59,501 | INFO     | [monitor] control thread has ended
[2026-04-30 12:10:09] 2026-04-30 10:10:03,979 | INFO     | all workflow threads have been joined
[2026-04-30 12:10:09] 2026-04-30 10:10:03,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 12:10:09] 2026-04-30 10:10:03,980 | INFO     | traces error code: 0
[2026-04-30 12:10:09] 2026-04-30 10:10:03,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 12:10:09] 2026-04-30 10:10:04,376 [wrapper] ==== pilot stdout END ====
[2026-04-30 12:10:09] 2026-04-30 10:10:04,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 12:10:09] 2026-04-30 10:10:04,568 [wrapper] pilotpid: 1524
[2026-04-30 12:10:09] 2026-04-30 10:10:04,680 [wrapper] Pilot exit status: 0
[2026-04-30 12:10:09] 2026-04-30 10:10:05,162 [wrapper] pandaids: 7119348670
[2026-04-30 12:10:09] 2026-04-30 10:10:06,257 [wrapper] cleanup supervisor_pilot 14070 1525
[2026-04-30 12:10:09] 2026-04-30 10:10:06,350 [wrapper] Test setup, not cleaning
[2026-04-30 12:10:09] 2026-04-30 10:10:06,444 [wrapper] apfmon messages muted
[2026-04-30 12:10:09] 2026-04-30 10:10:06,496 [wrapper] ==== wrapper stdout END ====
[2026-04-30 12:10:09] 2026-04-30 10:10:06,600 [wrapper] ==== wrapper stderr END ====
[2026-04-30 12:10:09]  *** Error codes and diagnostics ***
[2026-04-30 12:10:09]     "exeErrorCode": 0,
[2026-04-30 12:10:09]     "pilotErrorCode": 0,
[2026-04-30 12:10:09]  *** Listing of results directory ***
[2026-04-30 12:10:09] total 471448
[2026-04-30 12:10:09] -rwx------. 1 boinc boinc     36322 Apr 29 19:20 runpilot2-wrapper.sh
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc      5631 Apr 30 06:16 queuedata.json
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc    683926 Apr 30 06:16 pilot3.tar.gz
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc       100 Apr 30 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 12:10:09] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 06:16 run_atlas
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc       105 Apr 30 06:16 job.xml
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc      6307 Apr 30 06:17 init_data.xml
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc 263379141 Apr 30 06:17 EVNT.49863838._000101.pool.root.1
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc     15667 Apr 30 06:17 start_atlas.sh
[2026-04-30 12:10:09] drwxrwx--x. 2 boinc boinc        68 Apr 30 06:17 shared
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc    697429 Apr 30 06:17 input.tar.gz
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc         0 Apr 30 06:17 boinc_lockfile
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc      2591 Apr 30 06:17 pandaJob.out
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc       415 Apr 30 06:23 workernode_map.json
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc   1001878 Apr 30 06:23 agis_schedconf.cvmfs.json
[2026-04-30 12:10:09] drwx------. 5 boinc boinc      4096 Apr 30 06:23 pilot3
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc 210547185 Apr 30 12:07 HITS.49863840._004522.pool.root.1
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc       489 Apr 30 12:08 boinc_task_state.xml
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc        95 Apr 30 12:08 pilot_heartbeat.json
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc      1013 Apr 30 12:08 memory_monitor_summary.json
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc   1510841 Apr 30 12:08 agis_ddmendpoints.agis.ALL.json
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc    454594 Apr 30 12:08 log.49863840._004522.job.log.tgz.1
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc      6339 Apr 30 12:08 heartbeat_new.json
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc      6230 Apr 30 12:08 heartbeat.json
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc      8192 Apr 30 12:09 boinc_mmap_file
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc        28 Apr 30 12:09 wrapper_checkpoint.txt
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc      4882 Apr 30 12:10 pilotlog.txt
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc   1901549 Apr 30 12:10 log.49863840._004522.job.log.1
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc       357 Apr 30 12:10 output.list
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc       410 Apr 30 12:10 runtime_log
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc   2375680 Apr 30 12:10 result.tar.gz
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc      8439 Apr 30 12:10 runtime_log.err
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc       656 Apr 30 12:10 3de205554de6.diag
[2026-04-30 12:10:09] -rw-r--r--. 1 boinc boinc     20445 Apr 30 12:10 stderr.txt
[2026-04-30 12:10:09] HITS file was successfully produced:
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc 210547185 Apr 30 12:07 shared/HITS.pool.root.1
[2026-04-30 12:10:09]  *** Contents of shared directory: ***
[2026-04-30 12:10:09] total 465844
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc 263379141 Apr 30 06:17 ATLAS.root_0
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc     15667 Apr 30 06:17 start_atlas.sh
[2026-04-30 12:10:09] -rw-r--r--. 2 boinc boinc    697429 Apr 30 06:17 input.tar.gz
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc 210547185 Apr 30 12:07 HITS.pool.root.1
[2026-04-30 12:10:09] -rw-------. 1 boinc boinc   2375680 Apr 30 12:10 result.tar.gz
12:10:11 (29881): run_atlas exited; CPU time 78240.691313
12:10:11 (29881): called boinc_finish(0)

</stderr_txt>
]]>

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