Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:49 (26342): wrapper (7.7.26015): starting
05:39:49 (26342): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 05:39:49] Arguments: --nthreads 8
[2026-04-30 05:39:49] Threads: 8
[2026-04-30 05:39:49] Checking for CVMFS
[2026-04-30 05:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 05:39:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 05:39:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 05:39:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 05:39:54] 2.11.2.0 11840 20781 104352 159030 3 11 23451423 25165824 96 130560 0 7483852 99.904 6540138 10767 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 05:39:54] CVMFS is ok
[2026-04-30 05:39:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 05:39:54] Checking for apptainer binary...
[2026-04-30 05:39:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 05:39:54] Running /usr/bin/apptainer --version
[2026-04-30 05:39:54] apptainer version 1.3.2-1.el7
[2026-04-30 05:39:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 05:40:11] cg-vwn419.simple-grid.lan
[2026-04-30 05:40:11] apptainer works
[2026-04-30 05:40:11] Set ATHENA_PROC_NUMBER=8
[2026-04-30 05:40:11] Set ATHENA_CORE_NUMBER=8
[2026-04-30 05:40:12] Starting ATLAS job with PandaID=7120057362
[2026-04-30 05:40:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 10:48:29]  *** The last 200 lines of the pilot log: ***
[2026-04-30 10:48:29] 2026-04-30 08:47:27,692 | INFO     | this job has now completed (state=finished)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,692 | INFO     | log transfer has been attempted: DONE
[2026-04-30 10:48:29] 2026-04-30 08:47:27,692 | INFO     | job 7120057362 has finished - writing final server update
[2026-04-30 10:48:29] 2026-04-30 08:47:27,692 | INFO     | total number of processed events: 400 (read)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,695 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7120057362/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,695 | INFO     | extracted standard info from prmon json
[2026-04-30 10:48:29] 2026-04-30 08:47:27,695 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 10:48:29] 2026-04-30 08:47:27,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 10:48:29] 2026-04-30 08:47:27,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 10:48:29] 2026-04-30 08:47:27,702 | INFO     | fitting pss+swap vs Time
[2026-04-30 10:48:29] 2026-04-30 08:47:27,703 | INFO     | sum of square deviations: 7330250928.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,706 | INFO     | sum of deviations: 167717562823.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,706 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,706 | INFO     | mean y: 2409788.8153310106
[2026-04-30 10:48:29] 2026-04-30 08:47:27,706 | INFO     | intersect: 2409788.8153310106
[2026-04-30 10:48:29] 2026-04-30 08:47:27,707 | INFO     | chi2: 7.784518430402771
[2026-04-30 10:48:29] 2026-04-30 08:47:27,707 | INFO     | sum of square deviations: 6953769450.5
[2026-04-30 10:48:29] 2026-04-30 08:47:27,714 | INFO     | sum of deviations: 183291519396.49997
[2026-04-30 10:48:29] 2026-04-30 08:47:27,714 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,715 | INFO     | mean y: 2415988.4432624113
[2026-04-30 10:48:29] 2026-04-30 08:47:27,715 | INFO     | intersect: 2415988.4432624113
[2026-04-30 10:48:29] 2026-04-30 08:47:27,715 | INFO     | chi2: 7.058826571367122
[2026-04-30 10:48:29] 2026-04-30 08:47:27,715 | INFO     | current chi2=7.058826571367122 (change=9.322244728735276 %)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,716 | INFO     | right removable region: 281
[2026-04-30 10:48:29] 2026-04-30 08:47:27,716 | INFO     | sum of square deviations: 6953769450.5
[2026-04-30 10:48:29] 2026-04-30 08:47:27,719 | INFO     | sum of deviations: 66121035491.500015
[2026-04-30 10:48:29] 2026-04-30 08:47:27,719 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,719 | INFO     | mean y: 2450926.9680851065
[2026-04-30 10:48:29] 2026-04-30 08:47:27,719 | INFO     | intersect: 2450926.9680851065
[2026-04-30 10:48:29] 2026-04-30 08:47:27,720 | INFO     | chi2: 2.6873623305022245
[2026-04-30 10:48:29] 2026-04-30 08:47:27,720 | INFO     | current chi2=2.6873623305022245 (change=65.47811718183343 %)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,720 | INFO     | sum of square deviations: 6590404498.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,723 | INFO     | sum of deviations: 6730467513.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,723 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,723 | INFO     | mean y: 2475761.512635379
[2026-04-30 10:48:29] 2026-04-30 08:47:27,724 | INFO     | intersect: 2475761.512635379
[2026-04-30 10:48:29] 2026-04-30 08:47:27,724 | INFO     | chi2: 0.8627362288073195
[2026-04-30 10:48:29] 2026-04-30 08:47:27,724 | INFO     | current chi2=0.8627362288073195 (change=67.89654230785888 %)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,725 | INFO     | sum of square deviations: 6239923508.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,727 | INFO     | sum of deviations: -4570015446.000002
[2026-04-30 10:48:29] 2026-04-30 08:47:27,727 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,727 | INFO     | mean y: 2480661.992647059
[2026-04-30 10:48:29] 2026-04-30 08:47:27,728 | INFO     | intersect: 2480661.992647059
[2026-04-30 10:48:29] 2026-04-30 08:47:27,728 | INFO     | chi2: 0.7962810626716323
[2026-04-30 10:48:29] 2026-04-30 08:47:27,728 | INFO     | current chi2=0.7962810626716323 (change=7.702837080060656 %)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,728 | INFO     | left removable region: 15
[2026-04-30 10:48:29] 2026-04-30 08:47:27,729 | INFO     | sum of square deviations: 5836025702.5
[2026-04-30 10:48:29] 2026-04-30 08:47:27,731 | INFO     | sum of deviations: 13024891166.000017
[2026-04-30 10:48:29] 2026-04-30 08:47:27,732 | INFO     | mean x (centered): 0.0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,732 | INFO     | mean y: 2488482.1804511277
[2026-04-30 10:48:29] 2026-04-30 08:47:27,732 | INFO     | intersect: 2488482.1804511277
[2026-04-30 10:48:29] 2026-04-30 08:47:27,732 | INFO     | chi2: 0.003929109730729558
[2026-04-30 10:48:29] 2026-04-30 08:47:27,738 | INFO     | current memory leak: 2.23 B/s (using 266 data points, chi2=0.00)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | ..............................
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | . Timing measurements:
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | . get job = 0 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | . initial setup = 123 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | . payload setup = 282 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,739 | INFO     | . stage-in = 0 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,740 | INFO     | . payload execution = 17615 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,740 | INFO     | . stage-out = 3 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,740 | INFO     | . log creation = 1 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,740 | INFO     | ..............................
[2026-04-30 10:48:29] 2026-04-30 08:47:27,879 | INFO     | 
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | job summary report
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | --------------------------------------------------
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | PanDA job id: 7120057362
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | task id: 49963722
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | errors: (none)
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | pilot state: finished 
[2026-04-30 10:48:29] 2026-04-30 08:47:27,880 | INFO     | transexitcode: 0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | exeerrorcode: 0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | exeerrordiag: 
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | exitcode: 0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | exitmsg: OK
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | cpuconsumptiontime: 67147 s
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | nevents: 400
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | neventsw: 0
[2026-04-30 10:48:29] 2026-04-30 08:47:27,881 | INFO     | pid: 2471
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | pgrp: 2471
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | corecount: 8
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | event service: False
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | sizes: {0: 2279919, 1: 2280832, 2: 2282434, 12: 2282434, 17901: 2314660, 17902: 2314659, 17906: 2323899, 17907: 2324037}
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | --------------------------------------------------
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | 
[2026-04-30 10:48:29] 2026-04-30 08:47:27,882 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-30 10:48:29] 2026-04-30 08:47:28,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,444 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 10:48:29] 2026-04-30 08:47:28,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 10:48:29] 2026-04-30 08:47:28,447 | INFO     | job 7120057362 has completed (purged errors)
[2026-04-30 10:48:29] 2026-04-30 08:47:28,447 | INFO     | overall cleanup function is called
[2026-04-30 10:48:29] 2026-04-30 08:47:29,457 | INFO     | --- collectZombieJob: --- 10, [2471]
[2026-04-30 10:48:29] 2026-04-30 08:47:29,457 | INFO     | zombie collector waiting for pid 2471
[2026-04-30 10:48:29] 2026-04-30 08:47:29,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 10:48:29] 2026-04-30 08:47:29,457 | INFO     | collected zombie processes
[2026-04-30 10:48:29] 2026-04-30 08:47:29,457 | INFO     | will attempt to kill all subprocesses of pid=2471
[2026-04-30 10:48:29] 2026-04-30 08:47:29,512 | INFO     | process IDs to be killed: [2471] (in reverse order)
[2026-04-30 10:48:29] 2026-04-30 08:47:30,476 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 10:48:29] 2026-04-30 08:47:30,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 10:48:29] 2026-04-30 08:47:30,479 | INFO     | did not find any defunct processes belonging to 2471
[2026-04-30 10:48:29] 2026-04-30 08:47:30,481 | INFO     | did not find any defunct processes belonging to 2471
[2026-04-30 10:48:29] 2026-04-30 08:47:30,481 | INFO     | Ready for new job
[2026-04-30 10:48:29] 2026-04-30 08:47:30,483 | INFO     | ***************************************
[2026-04-30 10:48:29] 2026-04-30 08:47:30,483 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 10:48:29] 2026-04-30 08:47:30,483 | INFO     | ***************************************
[2026-04-30 10:48:29] 2026-04-30 08:47:30,483 | INFO     | 
[2026-04-30 10:48:29] 2026-04-30 08:47:30,484 | INFO     | pilot is running in a VM
[2026-04-30 10:48:29] 2026-04-30 08:47:30,484 | INFO     | architecture information:
[2026-04-30 10:48:29] 2026-04-30 08:47:30,485 | INFO     | executing command: cat /etc/os-release
[2026-04-30 10:48:29] 2026-04-30 08:47:30,755 | INFO     | cat /etc/os-release:
[2026-04-30 10:48:29] NAME="CentOS Linux"
[2026-04-30 10:48:29] VERSION="7 (Core)"
[2026-04-30 10:48:29] ID="centos"
[2026-04-30 10:48:29] ID_LIKE="rhel fedora"
[2026-04-30 10:48:29] VERSION_ID="7"
[2026-04-30 10:48:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 10:48:29] ANSI_COLOR="0;31"
[2026-04-30 10:48:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 10:48:29] HOME_URL="https://www.centos.org/"
[2026-04-30 10:48:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 10:48:29] 
[2026-04-30 10:48:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 10:48:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 10:48:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 10:48:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 10:48:29] 
[2026-04-30 10:48:29] 2026-04-30 08:47:30,755 | INFO     | ***************************************
[2026-04-30 10:48:29] 2026-04-30 08:47:31,259 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-30 10:48:29] 2026-04-30 08:47:31,509 | INFO     | sufficient remaining disk space (493683212288 B)
[2026-04-30 10:48:29] 2026-04-30 08:47:31,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 10:48:29] 2026-04-30 08:47:31,510 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 10:48:29] 2026-04-30 08:47:31,510 | INFO     | update_server=False
[2026-04-30 10:48:29] 2026-04-30 08:47:31,510 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 10:48:29] 2026-04-30 08:47:31,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 10:48:29] 2026-04-30 08:47:31,936 | INFO     | all payload control threads have been joined
[2026-04-30 10:48:29] 2026-04-30 08:47:32,102 | INFO     | all job control threads have been joined
[2026-04-30 10:48:29] 2026-04-30 08:47:32,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 10:48:29] 2026-04-30 08:47:32,192 | INFO     | aborting loop
[2026-04-30 10:48:29] 2026-04-30 08:47:32,349 | INFO     | all data control threads have been joined
[2026-04-30 10:48:29] 2026-04-30 08:47:32,516 | INFO     | [job] retrieve thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,547 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,738 | INFO     | [payload] validate_post thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,892 | INFO     | [job] validate thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 10:48:29] 2026-04-30 08:47:32,928 | INFO     | [payload] failed_post thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:32,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 10:48:29] 2026-04-30 08:47:32,942 | INFO     | [payload] control thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,108 | INFO     | [job] control thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,198 | INFO     | [job] job monitor thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,355 | INFO     | [data] control thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,447 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,530 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,603 | INFO     | [data] copytool_in thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,859 | INFO     | [data] copytool_out thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:33,906 | INFO     | [job] queue monitor thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:47:36,944 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 10:48:29] 2026-04-30 08:48:00,190 | INFO     | PID=30398 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 10:48:29] 2026-04-30 08:48:00,190 | INFO     | .. there are 2 such processes running
[2026-04-30 10:48:29] 2026-04-30 08:48:00,190 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 10:48:29] 2026-04-30 08:48:00,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 10:48:29] 2026-04-30 08:48:00,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 10:48:29] 2026-04-30 08:48:18,442 | INFO     | [monitor] cgroup control has ended
[2026-04-30 10:48:29] 2026-04-30 08:48:19,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476494460736)>', '<ExcThread(monitor, started 140475629565696)>']
[2026-04-30 10:48:29] 2026-04-30 08:48:20,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 10:48:29] 2026-04-30 08:48:20,311 | INFO     | [monitor] control thread has ended
[2026-04-30 10:48:29] 2026-04-30 08:48:24,455 | INFO     | all workflow threads have been joined
[2026-04-30 10:48:29] 2026-04-30 08:48:24,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 10:48:29] 2026-04-30 08:48:24,455 | INFO     | traces error code: 0
[2026-04-30 10:48:29] 2026-04-30 08:48:24,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 10:48:29] 2026-04-30 08:48:24,977 [wrapper] ==== pilot stdout END ====
[2026-04-30 10:48:29] 2026-04-30 08:48:25,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 10:48:29] 2026-04-30 08:48:25,169 [wrapper] pilotpid: 30398
[2026-04-30 10:48:29] 2026-04-30 08:48:25,287 [wrapper] Pilot exit status: 0
[2026-04-30 10:48:29] 2026-04-30 08:48:25,841 [wrapper] pandaids: 7120057362
[2026-04-30 10:48:29] 2026-04-30 08:48:26,687 [wrapper] cleanup supervisor_pilot 10021 30399
[2026-04-30 10:48:29] 2026-04-30 08:48:26,813 [wrapper] Test setup, not cleaning
[2026-04-30 10:48:29] 2026-04-30 08:48:26,875 [wrapper] apfmon messages muted
[2026-04-30 10:48:29] 2026-04-30 08:48:26,929 [wrapper] ==== wrapper stdout END ====
[2026-04-30 10:48:29] 2026-04-30 08:48:26,990 [wrapper] ==== wrapper stderr END ====
[2026-04-30 10:48:29]  *** Error codes and diagnostics ***
[2026-04-30 10:48:29]     "exeErrorCode": 0,
[2026-04-30 10:48:29]     "pilotErrorCode": 0,
[2026-04-30 10:48:29]  *** Listing of results directory ***
[2026-04-30 10:48:29] total 385124
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc    683926 Apr 30 05:20 pilot3.tar.gz
[2026-04-30 10:48:29] -rwx------. 1 boinc boinc     36322 Apr 30 05:36 runpilot2-wrapper.sh
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc      5631 Apr 30 05:37 queuedata.json
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc       100 Apr 30 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 10:48:29] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 05:39 run_atlas
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc       105 Apr 30 05:39 job.xml
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc 205198000 Apr 30 05:39 EVNT.49963720._000006.pool.root.1
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc      6307 Apr 30 05:39 init_data.xml
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc     15667 Apr 30 05:39 start_atlas.sh
[2026-04-30 10:48:29] drwxrwx--x. 2 boinc boinc        68 Apr 30 05:39 shared
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc    697383 Apr 30 05:39 input.tar.gz
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc         0 Apr 30 05:39 boinc_lockfile
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc      2487 Apr 30 05:40 pandaJob.out
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc       415 Apr 30 05:48 workernode_map.json
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc   1001878 Apr 30 05:48 agis_schedconf.cvmfs.json
[2026-04-30 10:48:29] drwx------. 5 boinc boinc      4096 Apr 30 05:48 pilot3
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc 180913870 Apr 30 10:45 HITS.49963722._000126.pool.root.1
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc       488 Apr 30 10:46 boinc_task_state.xml
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc        95 Apr 30 10:47 pilot_heartbeat.json
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc      1012 Apr 30 10:47 memory_monitor_summary.json
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc   1512704 Apr 30 10:47 agis_ddmendpoints.agis.ALL.json
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc    411536 Apr 30 10:47 log.49963722._000126.job.log.tgz.1
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc      6327 Apr 30 10:47 heartbeat_new.json
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc      6218 Apr 30 10:47 heartbeat.json
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc      8192 Apr 30 10:48 boinc_mmap_file
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc        28 Apr 30 10:48 wrapper_checkpoint.txt
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc      4884 Apr 30 10:48 pilotlog.txt
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc   1651682 Apr 30 10:48 log.49963722._000126.job.log.1
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc       357 Apr 30 10:48 output.list
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc       410 Apr 30 10:48 runtime_log
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc   2078720 Apr 30 10:48 result.tar.gz
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc      8455 Apr 30 10:48 runtime_log.err
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc       656 Apr 30 10:48 ce4f6de910c5.diag
[2026-04-30 10:48:29] -rw-r--r--. 1 boinc boinc     20638 Apr 30 10:48 stderr.txt
[2026-04-30 10:48:29] HITS file was successfully produced:
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc 180913870 Apr 30 10:45 shared/HITS.pool.root.1
[2026-04-30 10:48:29]  *** Contents of shared directory: ***
[2026-04-30 10:48:29] total 379800
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc 205198000 Apr 30 05:39 ATLAS.root_0
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc     15667 Apr 30 05:39 start_atlas.sh
[2026-04-30 10:48:29] -rw-r--r--. 2 boinc boinc    697383 Apr 30 05:39 input.tar.gz
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc 180913870 Apr 30 10:45 HITS.pool.root.1
[2026-04-30 10:48:29] -rw-------. 1 boinc boinc   2078720 Apr 30 10:48 result.tar.gz
10:48:31 (26342): run_atlas exited; CPU time 67327.997281
10:48:31 (26342): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN