Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:39:33 (1445758): wrapper (7.7.26015): starting
02:39:33 (1445758): wrapper: running run_atlas (--nthreads 12)
[2026-05-01 02:39:33] Arguments: --nthreads 12
[2026-05-01 02:39:33] Threads: 12
[2026-05-01 02:39:33] Checking for CVMFS
[2026-05-01 02:39:33] No cvmfs_config command found, will try listing directly
[2026-05-01 02:39:33] CVMFS is ok
[2026-05-01 02:39:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 02:39:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 02:39:33] Further information can be found at the LHC@home message board.
[2026-05-01 02:39:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 02:39:33] Checking for apptainer binary...
[2026-05-01 02:39:33] which: no apptainer in ((null))
[2026-05-01 02:39:33] apptainer is not installed, using version from CVMFS
[2026-05-01 02:39:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 02:39:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-01 02:39:33] apptainer works
[2026-05-01 02:39:33] Set ATHENA_PROC_NUMBER=12
[2026-05-01 02:39:33] Set ATHENA_CORE_NUMBER=12
[2026-05-01 02:39:33] Starting ATLAS job with PandaID=7118405755
[2026-05-01 02:39:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 03:24:53]  *** The last 200 lines of the pilot log: ***
[2026-05-01 03:24:53]  guid=da9adeb8-69d0-4063-b2e3-5eac223667ca
[2026-05-01 03:24:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-01 03:24:53]  is_altstaged=None
[2026-05-01 03:24:53]  is_tar=False
[2026-05-01 03:24:53]  lfn=log.49863851._003278.job.log.tgz.1
[2026-05-01 03:24:53]  mtime=0
[2026-05-01 03:24:53]  protocol_id=None
[2026-05-01 03:24:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-01 03:24:53]  replicas=None
[2026-05-01 03:24:53]  scope=mc23_13p6TeV
[2026-05-01 03:24:53]  status=None
[2026-05-01 03:24:53]  status_code=0
[2026-05-01 03:24:53]  storage_token=
[2026-05-01 03:24:53]  surl=/var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7118405755/log.49863851._003278.job.log.tgz.1
[2026-05-01 03:24:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/47/log.49863851._003278.job.log.tgz.1
[2026-05-01 03:24:53]  workdir=None
[2026-05-01 03:24:53] ]
[2026-05-01 03:24:53] 2026-05-01 01:23:43,111 | INFO     | transferring file log.49863851._003278.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7118405755/log.49863851._003278.job.log.tgz.1 to /var/lib/b
[2026-05-01 03:24:53] 2026-05-01 01:23:43,111 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7118405755/log.49863851._003278.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/2/lo
[2026-05-01 03:24:53] 2026-05-01 01:23:43,131 | INFO     | adding to output.list: log.49863851._003278.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/47/log.49863851._003278.job.log.tg
[2026-05-01 03:24:53] 2026-05-01 01:23:43,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-01 03:24:53] 2026-05-01 01:23:43,132 | INFO     | summary of transferred files:
[2026-05-01 03:24:53] 2026-05-01 01:23:43,132 | INFO     |  -- lfn=log.49863851._003278.job.log.tgz.1, status_code=0, status=transferred
[2026-05-01 03:24:53] 2026-05-01 01:23:43,132 | INFO     | stage-out finished correctly
[2026-05-01 03:24:53] 2026-05-01 01:23:44,571 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 03:24:53] 2026-05-01 01:23:45,315 | INFO     | job 7118405755 has state=finished
[2026-05-01 03:24:53] 2026-05-01 01:23:45,315 | INFO     | preparing for final server update for job 7118405755 in state='finished'
[2026-05-01 03:24:53] 2026-05-01 01:23:45,850 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,851 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7118405755/jobReport.json
[2026-05-01 03:24:53] 2026-05-01 01:23:45,852 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/2/workernode_map.json
[2026-05-01 03:24:53] 2026-05-01 01:23:45,852 | INFO     | this job has now completed (state=finished)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,853 | INFO     | log transfer has been attempted: DONE
[2026-05-01 03:24:53] 2026-05-01 01:23:45,853 | INFO     | job 7118405755 has finished - writing final server update
[2026-05-01 03:24:53] 2026-05-01 01:23:45,853 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3294470/.job.ad'
[2026-05-01 03:24:53] 2026-05-01 01:23:45,853 | INFO     | total number of processed events: 400 (read)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,870 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7118405755/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,871 | INFO     | extracted standard info from prmon json
[2026-05-01 03:24:53] 2026-05-01 01:23:45,871 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 03:24:53] 2026-05-01 01:23:45,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 03:24:53] 2026-05-01 01:23:45,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | fitting pss+swap vs Time
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | sum of square deviations: 14456085.0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | sum of deviations: 74808966.5
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | mean x (centered): 0.0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | mean y: 2737848.027777778
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | intersect: 2737848.027777778
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | chi2: 0.0005026018917659673
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | current memory leak: 5.17 B/s (using 36 data points, chi2=0.00)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | could have reported an average CPU frequency of 3627 MHz (5 samples)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | ..............................
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | . Timing measurements:
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | . get job = 0 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,872 | INFO     | . initial setup = 3 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | . payload setup = 5 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | . stage-in = 0 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | . payload execution = 2618 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | . stage-out = 0 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | . log creation = 0 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,873 | INFO     | ..............................
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | 
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | job summary report
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | --------------------------------------------------
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | PanDA job id: 7118405755
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | task id: 49863851
[2026-05-01 03:24:53] 2026-05-01 01:23:45,922 | INFO     | errors: (none)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | pilot state: finished 
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | transexitcode: 0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | exeerrorcode: 0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | exeerrordiag: 
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | exitcode: 0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | exitmsg: OK
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | cpuconsumptiontime: 28613 s
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | nevents: 400
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | neventsw: 0
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | pid: 1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | pgrp: 1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | corecount: 12
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | event service: False
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | sizes: {0: 2278421, 10: 2278421, 2628: 2303685, 2630: 2312705, 2631: 2312761, 2633: 2312987}
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | --------------------------------------------------
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | 
[2026-05-01 03:24:53] 2026-05-01 01:23:45,923 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/2
[2026-05-01 03:24:53] 2026-05-01 01:23:45,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 03:24:53] 2026-05-01 01:23:45,944 | INFO     | job 7118405755 has completed (purged errors)
[2026-05-01 03:24:53] 2026-05-01 01:23:45,945 | INFO     | overall cleanup function is called
[2026-05-01 03:24:53] 2026-05-01 01:23:46,952 | INFO     | --- collectZombieJob: --- 10, [1456404]
[2026-05-01 03:24:53] 2026-05-01 01:23:46,953 | INFO     | zombie collector waiting for pid 1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:46,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 03:24:53] 2026-05-01 01:23:46,953 | INFO     | collected zombie processes
[2026-05-01 03:24:53] 2026-05-01 01:23:46,953 | INFO     | will attempt to kill all subprocesses of pid=1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:47,400 | WARNING  | process 1456404 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 03:24:53] 2026-05-01 01:23:48,349 | INFO     | process IDs to be killed: [1456404] (in reverse order)
[2026-05-01 03:24:53] 2026-05-01 01:23:48,402 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 03:24:53] 2026-05-01 01:23:48,479 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 03:24:53] 2026-05-01 01:23:48,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 03:24:53] 2026-05-01 01:23:48,551 | INFO     | did not find any defunct processes belonging to 1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:48,616 | INFO     | did not find any defunct processes belonging to 1456404
[2026-05-01 03:24:53] 2026-05-01 01:23:48,616 | INFO     | Ready for new job
[2026-05-01 03:24:53] 2026-05-01 01:23:48,617 | INFO     | ***************************************
[2026-05-01 03:24:53] 2026-05-01 01:23:48,617 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 03:24:53] 2026-05-01 01:23:48,617 | INFO     | ***************************************
[2026-05-01 03:24:53] 2026-05-01 01:23:48,617 | INFO     | 
[2026-05-01 03:24:53] 2026-05-01 01:23:48,628 | INFO     | architecture information:
[2026-05-01 03:24:53] 2026-05-01 01:23:48,628 | INFO     | executing command: cat /etc/os-release
[2026-05-01 03:24:53] 2026-05-01 01:23:48,642 | INFO     | cat /etc/os-release:
[2026-05-01 03:24:53] NAME="CentOS Linux"
[2026-05-01 03:24:53] VERSION="7 (Core)"
[2026-05-01 03:24:53] ID="centos"
[2026-05-01 03:24:53] ID_LIKE="rhel fedora"
[2026-05-01 03:24:53] VERSION_ID="7"
[2026-05-01 03:24:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 03:24:53] ANSI_COLOR="0;31"
[2026-05-01 03:24:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 03:24:53] HOME_URL="https://www.centos.org/"
[2026-05-01 03:24:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 03:24:53] 
[2026-05-01 03:24:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 03:24:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 03:24:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 03:24:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 03:24:53] 
[2026-05-01 03:24:53] 2026-05-01 01:23:48,642 | INFO     | ***************************************
[2026-05-01 03:24:53] 2026-05-01 01:23:48,753 | INFO     | number of running child processes to parent process 1456404: 1
[2026-05-01 03:24:53] 2026-05-01 01:23:48,753 | INFO     | maximum number of monitored processes: 6
[2026-05-01 03:24:53] 2026-05-01 01:23:48,753 | INFO     | aborting job monitoring since job object (job id=7118405755) has expired
[2026-05-01 03:24:53] 2026-05-01 01:23:49,145 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/2
[2026-05-01 03:24:53] 2026-05-01 01:23:49,165 | INFO     | sufficient remaining disk space (71007469568 B)
[2026-05-01 03:24:53] 2026-05-01 01:23:49,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 03:24:53] 2026-05-01 01:23:49,166 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 03:24:53] 2026-05-01 01:23:49,166 | INFO     | update_server=False
[2026-05-01 03:24:53] 2026-05-01 01:23:49,166 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 03:24:53] 2026-05-01 01:23:49,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 03:24:53] 2026-05-01 01:23:49,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 03:24:53] 2026-05-01 01:23:49,167 | INFO     | will abort loop
[2026-05-01 03:24:53] 2026-05-01 01:23:49,183 | INFO     | all payload control threads have been joined
[2026-05-01 03:24:53] 2026-05-01 01:23:50,072 | INFO     | all data control threads have been joined
[2026-05-01 03:24:53] 2026-05-01 01:23:50,171 | INFO     | [job] retrieve thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,172 | INFO     | [job] job monitor thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,189 | INFO     | [payload] control thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,454 | INFO     | [payload] validate_post thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,589 | INFO     | all job control threads have been joined
[2026-05-01 03:24:53] 2026-05-01 01:23:50,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 03:24:53] 2026-05-01 01:23:50,665 | INFO     | [job] validate thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,861 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 03:24:53] 2026-05-01 01:23:50,941 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:50,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,074 | INFO     | [data] control thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,172 | INFO     | [data] copytool_out thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,200 | INFO     | [payload] failed_post thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,361 | INFO     | [data] copytool_in thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,402 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,595 | INFO     | [job] control thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:51,938 | INFO     | [job] queue monitor thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:23:54,630 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 03:24:53] 2026-05-01 01:24:17,484 | INFO     | PID=1450273 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 03:24:53] 2026-05-01 01:24:17,484 | INFO     | .. there are 20 such processes running
[2026-05-01 03:24:53] 2026-05-01 01:24:17,484 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 03:24:53] 2026-05-01 01:24:17,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 03:24:53] 2026-05-01 01:24:17,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 03:24:53] 2026-05-01 01:24:38,410 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-05-01 03:24:53] 2026-05-01 01:24:46,592 | INFO     | [monitor] cgroup control has ended
[2026-05-01 03:24:53] 2026-05-01 01:24:48,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23250486929216)>', '<ExcThread(monitor, started 23250184673024)>']
[2026-05-01 03:24:53] 2026-05-01 01:24:49,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 03:24:53] 2026-05-01 01:24:49,632 | INFO     | [monitor] control thread has ended
[2026-05-01 03:24:53] 2026-05-01 01:24:53,653 | INFO     | all workflow threads have been joined
[2026-05-01 03:24:53] 2026-05-01 01:24:53,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 03:24:53] 2026-05-01 01:24:53,653 | INFO     | traces error code: 0
[2026-05-01 03:24:53] 2026-05-01 01:24:53,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 03:24:53] 2026-05-01 01:24:53,783 [wrapper] ==== pilot stdout END ====
[2026-05-01 03:24:53] 2026-05-01 01:24:53,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 03:24:53] 2026-05-01 01:24:53,789 [wrapper] pilotpid: 1450273
[2026-05-01 03:24:53] 2026-05-01 01:24:53,791 [wrapper] Pilot exit status: 0
[2026-05-01 03:24:53] 2026-05-01 01:24:53,799 [wrapper] pandaids: 7118405755
[2026-05-01 03:24:53] 2026-05-01 01:24:53,874 [wrapper] cleanup supervisor_pilot 1832516 1450274
[2026-05-01 03:24:53] 2026-05-01 01:24:53,877 [wrapper] Test setup, not cleaning
[2026-05-01 03:24:53] 2026-05-01 01:24:53,879 [wrapper] apfmon messages muted
[2026-05-01 03:24:53] 2026-05-01 01:24:53,882 [wrapper] ==== wrapper stdout END ====
[2026-05-01 03:24:53] 2026-05-01 01:24:53,884 [wrapper] ==== wrapper stderr END ====
[2026-05-01 03:24:53]  *** Error codes and diagnostics ***
[2026-05-01 03:24:53]     "exeErrorCode": 0,
[2026-05-01 03:24:53]     "pilotErrorCode": 0,
[2026-05-01 03:24:53]  *** Listing of results directory ***
[2026-05-01 03:24:53] total 473444
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc    683926 Apr 29 07:26 pilot3.tar.gz
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc      5631 Apr 29 07:43 queuedata.json
[2026-05-01 03:24:53] -rwx------. 1 boinc boinc     36322 Apr 29 07:43 runpilot2-wrapper.sh
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc       100 May  1 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 03:24:53] -rwxr-xr-x. 1 boinc boinc      7986 May  1 02:39 run_atlas
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc       105 May  1 02:39 job.xml
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc 259524416 May  1 02:39 EVNT.49863848._000131.pool.root.1
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc      6628 May  1 02:39 init_data.xml
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc     15667 May  1 02:39 start_atlas.sh
[2026-05-01 03:24:53] drwxrwx--x. 2 boinc boinc      4096 May  1 02:39 shared
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc    697439 May  1 02:39 input.tar.gz
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc         0 May  1 02:39 boinc_lockfile
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc      2650 May  1 02:39 pandaJob.out
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc   1001806 May  1 02:39 agis_schedconf.cvmfs.json
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc   1510091 May  1 02:39 agis_ddmendpoints.agis.ALL.json
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc       444 May  1 02:39 workernode_map.json
[2026-05-01 03:24:53] drwx------. 5 boinc boinc      4096 May  1 02:39 pilot3
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc 219852666 May  1 03:23 HITS.49863851._003278.pool.root.1
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc        95 May  1 03:23 pilot_heartbeat.json
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc      1030 May  1 03:23 memory_monitor_summary.json
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc       487 May  1 03:23 boinc_task_state.xml
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc    349882 May  1 03:23 log.49863851._003278.job.log.tgz.1
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc      6372 May  1 03:23 heartbeat_new.json
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc      6263 May  1 03:23 heartbeat.json
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc        27 May  1 03:24 wrapper_checkpoint.txt
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc      8192 May  1 03:24 boinc_mmap_file
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc      5122 May  1 03:24 pilotlog.txt
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc    293230 May  1 03:24 log.49863851._003278.job.log.1
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc       357 May  1 03:24 output.list
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc       410 May  1 03:24 runtime_log
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc    665600 May  1 03:24 result.tar.gz
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc      8829 May  1 03:24 runtime_log.err
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc       662 May  1 03:24 9a95ba19c421.diag
[2026-05-01 03:24:53] -rw-r--r--. 1 boinc boinc     21189 May  1 03:24 stderr.txt
[2026-05-01 03:24:53] HITS file was successfully produced:
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc 219852666 May  1 03:23 shared/HITS.pool.root.1
[2026-05-01 03:24:53]  *** Contents of shared directory: ***
[2026-05-01 03:24:53] total 469504
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc 259524416 May  1 02:39 ATLAS.root_0
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc     15667 May  1 02:39 start_atlas.sh
[2026-05-01 03:24:53] -rw-r--r--. 2 boinc boinc    697439 May  1 02:39 input.tar.gz
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc 219852666 May  1 03:23 HITS.pool.root.1
[2026-05-01 03:24:53] -rw-------. 1 boinc boinc    665600 May  1 03:24 result.tar.gz
03:24:55 (1445758): run_atlas exited; CPU time 28670.088924
03:24:55 (1445758): called boinc_finish(0)

</stderr_txt>
]]>

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