Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:25:40 (145173): wrapper (7.7.26015): starting
01:25:40 (145173): wrapper: running run_atlas (--nthreads 12)
[2026-05-01 01:25:40] Arguments: --nthreads 12
[2026-05-01 01:25:40] Threads: 12
[2026-05-01 01:25:40] Checking for CVMFS
[2026-05-01 01:25:40] No cvmfs_config command found, will try listing directly
[2026-05-01 01:25:40] CVMFS is ok
[2026-05-01 01:25:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 01:25:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 01:25:40] Further information can be found at the LHC@home message board.
[2026-05-01 01:25:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 01:25:40] Checking for apptainer binary...
[2026-05-01 01:25:40] which: no apptainer in ((null))
[2026-05-01 01:25:40] apptainer is not installed, using version from CVMFS
[2026-05-01 01:25:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 01:25:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-05-01 01:25:40] apptainer works
[2026-05-01 01:25:40] Set ATHENA_PROC_NUMBER=12
[2026-05-01 01:25:40] Set ATHENA_CORE_NUMBER=12
[2026-05-01 01:25:40] Starting ATLAS job with PandaID=7119509225
[2026-05-01 01:25:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 01:56:22]  *** The last 200 lines of the pilot log: ***
[2026-05-01 01:56:22]  is_altstaged=None
[2026-05-01 01:56:22]  is_tar=False
[2026-05-01 01:56:22]  lfn=log.49963706._000127.job.log.tgz.1
[2026-05-01 01:56:22]  mtime=0
[2026-05-01 01:56:22]  protocol_id=None
[2026-05-01 01:56:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-01 01:56:22]  replicas=None
[2026-05-01 01:56:22]  scope=mc23_13p6TeV
[2026-05-01 01:56:22]  status=None
[2026-05-01 01:56:22]  status_code=0
[2026-05-01 01:56:22]  storage_token=
[2026-05-01 01:56:22]  surl=/var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7119509225/log.49963706._000127.job.log.tgz.1
[2026-05-01 01:56:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/44/log.49963706._000127.job.log.tgz.1
[2026-05-01 01:56:22]  workdir=None
[2026-05-01 01:56:22] ]
[2026-05-01 01:56:22] 2026-04-30 23:55:44,608 | INFO     | transferring file log.49963706._000127.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7119509225/log.49963706._000127.job.log.tgz.1 to /var/lib/
[2026-05-01 01:56:22] 2026-04-30 23:55:44,608 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7119509225/log.49963706._000127.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/1/
[2026-05-01 01:56:22] 2026-04-30 23:55:44,624 | INFO     | adding to output.list: log.49963706._000127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/44/log.49963706._000127.job.log.tg
[2026-05-01 01:56:22] 2026-04-30 23:55:44,625 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-01 01:56:22] 2026-04-30 23:55:44,625 | INFO     | summary of transferred files:
[2026-05-01 01:56:22] 2026-04-30 23:55:44,625 | INFO     |  -- lfn=log.49963706._000127.job.log.tgz.1, status_code=0, status=transferred
[2026-05-01 01:56:22] 2026-04-30 23:55:44,625 | INFO     | stage-out finished correctly
[2026-05-01 01:56:22] 2026-04-30 23:55:45,334 | INFO     | PID=149689 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 01:56:22] 2026-04-30 23:55:45,334 | INFO     | .. there are 18 such processes running
[2026-05-01 01:56:22] 2026-04-30 23:55:45,402 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 01:56:22] 2026-04-30 23:55:46,393 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,864 | INFO     | job 7119509225 has state=finished
[2026-05-01 01:56:22] 2026-04-30 23:55:47,864 | INFO     | preparing for final server update for job 7119509225 in state='finished'
[2026-05-01 01:56:22] 2026-04-30 23:55:47,864 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7119509225/jobReport.json
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/1/workernode_map.json
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | this job has now completed (state=finished)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | log transfer has been attempted: DONE
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | job 7119509225 has finished - writing final server update
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2028343/.job.ad'
[2026-05-01 01:56:22] 2026-04-30 23:55:47,866 | INFO     | total number of processed events: 400 (read)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,883 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7119509225/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,884 | INFO     | extracted standard info from prmon json
[2026-05-01 01:56:22] 2026-04-30 23:55:47,884 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 01:56:22] 2026-04-30 23:55:47,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 01:56:22] 2026-04-30 23:55:47,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 01:56:22] 2026-04-30 23:55:47,884 | INFO     | fitting pss+swap vs Time
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | sum of square deviations: 3294945.5
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | sum of deviations: 69947998.5
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | mean x (centered): 0.0
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | mean y: 2692341.1363636362
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | intersect: 2692341.1363636362
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | chi2: 2.301127906074166e-05
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | current memory leak: 21.23 B/s (using 22 data points, chi2=0.00)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | could have reported an average CPU frequency of 3628 MHz (4 samples)
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | ..............................
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | . Timing measurements:
[2026-05-01 01:56:22] 2026-04-30 23:55:47,885 | INFO     | . get job = 0 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . initial setup = 4 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . payload setup = 5 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . stage-in = 0 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . payload execution = 1772 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . stage-out = 0 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | . log creation = 0 s
[2026-05-01 01:56:22] 2026-04-30 23:55:47,886 | INFO     | ..............................
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | 
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | job summary report
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | --------------------------------------------------
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | PanDA job id: 7119509225
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | task id: 49963706
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | errors: (none)
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | pilot state: finished 
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | transexitcode: 0
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | exeerrorcode: 0
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | exeerrordiag: 
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | exitcode: 0
[2026-05-01 01:56:22] 2026-04-30 23:55:48,364 | INFO     | exitmsg: OK
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | cpuconsumptiontime: 19115 s
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | nevents: 400
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | neventsw: 0
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | pid: 164284
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | pgrp: 164284
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | corecount: 12
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | event service: False
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | sizes: {0: 2278235, 11: 2278235, 1781: 2303107, 1782: 2312129, 1783: 2312185, 1786: 2312379}
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | --------------------------------------------------
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | 
[2026-05-01 01:56:22] 2026-04-30 23:55:48,365 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/1
[2026-05-01 01:56:22] 2026-04-30 23:55:48,382 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | job 7119509225 has completed (purged errors)
[2026-05-01 01:56:22] 2026-04-30 23:55:48,383 | INFO     | overall cleanup function is called
[2026-05-01 01:56:22] 2026-04-30 23:55:49,390 | INFO     | --- collectZombieJob: --- 10, [164284]
[2026-05-01 01:56:22] 2026-04-30 23:55:49,390 | INFO     | zombie collector waiting for pid 164284
[2026-05-01 01:56:22] 2026-04-30 23:55:49,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 01:56:22] 2026-04-30 23:55:49,390 | INFO     | collected zombie processes
[2026-05-01 01:56:22] 2026-04-30 23:55:49,391 | INFO     | will attempt to kill all subprocesses of pid=164284
[2026-05-01 01:56:22] 2026-04-30 23:55:50,445 | INFO     | process IDs to be killed: [164284] (in reverse order)
[2026-05-01 01:56:22] 2026-04-30 23:55:50,508 | WARNING  | process 164284 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 01:56:22] 2026-04-30 23:55:50,561 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 01:56:22] 2026-04-30 23:55:50,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 01:56:22] 2026-04-30 23:55:50,618 | INFO     | did not find any defunct processes belonging to 164284
[2026-05-01 01:56:22] 2026-04-30 23:55:50,675 | INFO     | did not find any defunct processes belonging to 164284
[2026-05-01 01:56:22] 2026-04-30 23:55:50,675 | INFO     | Ready for new job
[2026-05-01 01:56:22] 2026-04-30 23:55:50,676 | INFO     | ***************************************
[2026-05-01 01:56:22] 2026-04-30 23:55:50,676 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 01:56:22] 2026-04-30 23:55:50,676 | INFO     | ***************************************
[2026-05-01 01:56:22] 2026-04-30 23:55:50,676 | INFO     | 
[2026-05-01 01:56:22] 2026-04-30 23:55:50,686 | INFO     | architecture information:
[2026-05-01 01:56:22] 2026-04-30 23:55:50,687 | INFO     | executing command: cat /etc/os-release
[2026-05-01 01:56:22] 2026-04-30 23:55:50,700 | INFO     | cat /etc/os-release:
[2026-05-01 01:56:22] NAME="CentOS Linux"
[2026-05-01 01:56:22] VERSION="7 (Core)"
[2026-05-01 01:56:22] ID="centos"
[2026-05-01 01:56:22] ID_LIKE="rhel fedora"
[2026-05-01 01:56:22] VERSION_ID="7"
[2026-05-01 01:56:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 01:56:22] ANSI_COLOR="0;31"
[2026-05-01 01:56:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 01:56:22] HOME_URL="https://www.centos.org/"
[2026-05-01 01:56:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 01:56:22] 
[2026-05-01 01:56:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 01:56:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 01:56:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 01:56:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 01:56:22] 
[2026-05-01 01:56:22] 2026-04-30 23:55:50,700 | INFO     | ***************************************
[2026-05-01 01:56:22] 2026-04-30 23:55:50,808 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 01:56:22] 2026-04-30 23:55:51,034 | INFO     | number of running child processes to parent process 164284: 1
[2026-05-01 01:56:22] 2026-04-30 23:55:51,034 | INFO     | maximum number of monitored processes: 6
[2026-05-01 01:56:22] 2026-04-30 23:55:51,034 | INFO     | aborting job monitoring since job object (job id=7119509225) has expired
[2026-05-01 01:56:22] 2026-04-30 23:55:51,203 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-05-01 01:56:22] 2026-04-30 23:55:51,222 | INFO     | sufficient remaining disk space (92507471872 B)
[2026-05-01 01:56:22] 2026-04-30 23:55:51,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 01:56:22] 2026-04-30 23:55:51,223 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 01:56:22] 2026-04-30 23:55:51,223 | INFO     | update_server=False
[2026-05-01 01:56:22] 2026-04-30 23:55:51,223 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 01:56:22] 2026-04-30 23:55:51,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 01:56:22] 2026-04-30 23:55:51,223 | INFO     | will abort loop
[2026-05-01 01:56:22] 2026-04-30 23:55:51,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 01:56:22] 2026-04-30 23:55:51,502 | INFO     | all data control threads have been joined
[2026-05-01 01:56:22] 2026-04-30 23:55:52,205 | INFO     | all payload control threads have been joined
[2026-05-01 01:56:22] 2026-04-30 23:55:52,228 | INFO     | [job] retrieve thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,229 | INFO     | [job] job monitor thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,373 | INFO     | all job control threads have been joined
[2026-05-01 01:56:22] 2026-04-30 23:55:52,455 | INFO     | [job] validate thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,507 | INFO     | [data] control thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,579 | INFO     | [payload] validate_post thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,588 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 01:56:22] 2026-04-30 23:55:52,692 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,790 | INFO     | [data] copytool_in thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:52,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 01:56:22] 2026-04-30 23:55:53,208 | INFO     | [payload] control thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:53,261 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:53,300 | INFO     | [monitor] cgroup control has ended
[2026-05-01 01:56:22] 2026-04-30 23:55:53,378 | INFO     | [job] control thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:53,664 | INFO     | [payload] failed_post thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:53,951 | INFO     | [job] queue monitor thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:54,690 | INFO     | [data] copytool_out thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:55:55,462 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:56:02,141 | INFO     | job.realtimelogging is not enabled
[2026-05-01 01:56:22] 2026-04-30 23:56:03,147 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 01:56:22] 2026-04-30 23:56:05,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22705806194496)>', '<ExcThread(monitor, started 22705566127872)>']
[2026-05-01 01:56:22] 2026-04-30 23:56:10,051 | INFO     | all workflow threads have been joined
[2026-05-01 01:56:22] 2026-04-30 23:56:10,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 01:56:22] 2026-04-30 23:56:10,052 | INFO     | traces error code: 0
[2026-05-01 01:56:22] 2026-04-30 23:56:10,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 01:56:22] 2026-04-30 23:56:21,763 | INFO     | PID=149689 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 01:56:22] 2026-04-30 23:56:21,764 | INFO     | .. there are 19 such processes running
[2026-05-01 01:56:22] 2026-04-30 23:56:21,765 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 01:56:22] 2026-04-30 23:56:21,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 01:56:22] 2026-04-30 23:56:21,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 01:56:22] 2026-04-30 23:56:21,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 01:56:22] 2026-04-30 23:56:21,765 | INFO     | [monitor] control thread has ended
[2026-05-01 01:56:22] 2026-04-30 23:56:21,895 [wrapper] ==== pilot stdout END ====
[2026-05-01 01:56:22] 2026-04-30 23:56:21,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 01:56:22] 2026-04-30 23:56:21,899 [wrapper] pilotpid: 149689
[2026-05-01 01:56:22] 2026-04-30 23:56:21,901 [wrapper] Pilot exit status: 0
[2026-05-01 01:56:22] 2026-04-30 23:56:21,906 [wrapper] pandaids: 7119509225
[2026-05-01 01:56:22] 2026-04-30 23:56:21,987 [wrapper] cleanup supervisor_pilot  396024 149690
[2026-05-01 01:56:22] 2026-04-30 23:56:21,989 [wrapper] Test setup, not cleaning
[2026-05-01 01:56:22] 2026-04-30 23:56:21,991 [wrapper] apfmon messages muted
[2026-05-01 01:56:22] 2026-04-30 23:56:21,992 [wrapper] ==== wrapper stdout END ====
[2026-05-01 01:56:22] 2026-04-30 23:56:21,994 [wrapper] ==== wrapper stderr END ====
[2026-05-01 01:56:22]  *** Error codes and diagnostics ***
[2026-05-01 01:56:22]     "exeErrorCode": 0,
[2026-05-01 01:56:22]     "pilotErrorCode": 0,
[2026-05-01 01:56:22]  *** Listing of results directory ***
[2026-05-01 01:56:22] total 376236
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc    683926 Apr 30 01:05 pilot3.tar.gz
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc      5631 Apr 30 01:47 queuedata.json
[2026-05-01 01:56:22] -rwx------. 1 boinc boinc     36322 Apr 30 01:47 runpilot2-wrapper.sh
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc       100 May  1 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 01:56:22] -rwxr-xr-x. 1 boinc boinc      7986 May  1 01:25 run_atlas
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc       105 May  1 01:25 job.xml
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc 204712888 May  1 01:25 EVNT.49963704._000006.pool.root.1
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc     15667 May  1 01:25 start_atlas.sh
[2026-05-01 01:56:22] drwxrwx--x. 2 boinc boinc      4096 May  1 01:25 shared
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc    697393 May  1 01:25 input.tar.gz
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc      6630 May  1 01:25 init_data.xml
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc         0 May  1 01:25 boinc_lockfile
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc      2506 May  1 01:25 pandaJob.out
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc   1001806 May  1 01:25 agis_schedconf.cvmfs.json
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc   1510091 May  1 01:25 agis_ddmendpoints.agis.ALL.json
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc       444 May  1 01:25 workernode_map.json
[2026-05-01 01:56:22] drwx------. 5 boinc boinc      4096 May  1 01:25 pilot3
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc 175352785 May  1 01:55 HITS.49963706._000127.pool.root.1
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc       487 May  1 01:55 boinc_task_state.xml
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc      1031 May  1 01:55 memory_monitor_summary.json
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc    319154 May  1 01:55 log.49963706._000127.job.log.tgz.1
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc      6370 May  1 01:55 heartbeat_new.json
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc      6261 May  1 01:55 heartbeat.json
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc      8192 May  1 01:56 boinc_mmap_file
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc        27 May  1 01:56 wrapper_checkpoint.txt
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc       822 May  1 01:56 pilotlog.txt
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc        95 May  1 01:56 pilot_heartbeat.json
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc    216302 May  1 01:56 log.49963706._000127.job.log.1
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc       357 May  1 01:56 output.list
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc       410 May  1 01:56 runtime_log
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc    552960 May  1 01:56 result.tar.gz
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc      8846 May  1 01:56 runtime_log.err
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc       659 May  1 01:56 98ad22f3f759.diag
[2026-05-01 01:56:22] -rw-r--r--. 1 boinc boinc     21339 May  1 01:56 stderr.txt
[2026-05-01 01:56:22] HITS file was successfully produced:
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc 175352785 May  1 01:55 shared/HITS.pool.root.1
[2026-05-01 01:56:22]  *** Contents of shared directory: ***
[2026-05-01 01:56:22] total 372408
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc 204712888 May  1 01:25 ATLAS.root_0
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc     15667 May  1 01:25 start_atlas.sh
[2026-05-01 01:56:22] -rw-r--r--. 2 boinc boinc    697393 May  1 01:25 input.tar.gz
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc 175352785 May  1 01:55 HITS.pool.root.1
[2026-05-01 01:56:22] -rw-------. 1 boinc boinc    552960 May  1 01:56 result.tar.gz
01:56:23 (145173): run_atlas exited; CPU time 19149.667466
01:56:23 (145173): called boinc_finish(0)

</stderr_txt>
]]>

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