Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:13:50 (656243): wrapper (7.7.26015): starting
08:13:50 (656243): wrapper: running run_atlas (--nthreads 4)
[2026-05-02 08:13:50] Arguments: --nthreads 4
[2026-05-02 08:13:50] Threads: 4
[2026-05-02 08:13:50] Checking for CVMFS
[2026-05-02 08:13:50] No cvmfs_config command found, will try listing directly
[2026-05-02 08:13:50] CVMFS is ok
[2026-05-02 08:13:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 08:13:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 08:13:50] Further information can be found at the LHC@home message board.
[2026-05-02 08:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 08:13:50] Checking for apptainer binary...
[2026-05-02 08:13:50] which: no apptainer in ((null))
[2026-05-02 08:13:50] apptainer is not installed, using version from CVMFS
[2026-05-02 08:13:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 08:13:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-02 08:13:50] apptainer works
[2026-05-02 08:13:50] Set ATHENA_PROC_NUMBER=4
[2026-05-02 08:13:50] Set ATHENA_CORE_NUMBER=4
[2026-05-02 08:13:50] Starting ATLAS job with PandaID=7119525602
[2026-05-02 08:13:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 12:13:10]  *** The last 200 lines of the pilot log: ***
[2026-05-02 12:13:10] 2026-05-02 10:10:51,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,196 | INFO     | monitor loop #967: job 0:7119525602 is in state 'finished'
[2026-05-02 12:13:10] 2026-05-02 10:10:54,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,312 | INFO     | job 7119525602 has state=finished
[2026-05-02 12:13:10] 2026-05-02 10:10:54,312 | INFO     | preparing for final server update for job 7119525602 in state='finished'
[2026-05-02 12:13:10] 2026-05-02 10:10:54,312 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7119525602/jobReport.json
[2026-05-02 12:13:10] 2026-05-02 10:10:54,316 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/0/workernode_map.json
[2026-05-02 12:13:10] 2026-05-02 10:10:54,316 | INFO     | this job has now completed (state=finished)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,316 | INFO     | log transfer has been attempted: DONE
[2026-05-02 12:13:10] 2026-05-02 10:10:54,317 | INFO     | job 7119525602 has finished - writing final server update
[2026-05-02 12:13:10] 2026-05-02 10:10:54,317 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_113664/.job.ad'
[2026-05-02 12:13:10] 2026-05-02 10:10:54,317 | INFO     | total number of processed events: 400 (read)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,342 | INFO     | using path: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7119525602/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,343 | INFO     | extracted standard info from prmon json
[2026-05-02 12:13:10] 2026-05-02 10:10:54,343 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 12:13:10] 2026-05-02 10:10:54,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 12:13:10] 2026-05-02 10:10:54,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 12:13:10] 2026-05-02 10:10:54,348 | INFO     | fitting pss+swap vs Time
[2026-05-02 12:13:10] 2026-05-02 10:10:54,348 | INFO     | sum of square deviations: 3871990738.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,350 | INFO     | sum of deviations: -23803271190.500004
[2026-05-02 12:13:10] 2026-05-02 10:10:54,350 | INFO     | mean x (centered): 0.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,350 | INFO     | mean y: 2374119.245689655
[2026-05-02 12:13:10] 2026-05-02 10:10:54,350 | INFO     | intersect: 2374119.245689655
[2026-05-02 12:13:10] 2026-05-02 10:10:54,350 | INFO     | chi2: 1.4442736066681696
[2026-05-02 12:13:10] 2026-05-02 10:10:54,351 | INFO     | sum of square deviations: 3627000098.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,352 | INFO     | sum of deviations: -23236073945.000015
[2026-05-02 12:13:10] 2026-05-02 10:10:54,352 | INFO     | mean x (centered): 0.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,352 | INFO     | mean y: 2374472.374449339
[2026-05-02 12:13:10] 2026-05-02 10:10:54,353 | INFO     | intersect: 2374472.374449339
[2026-05-02 12:13:10] 2026-05-02 10:10:54,353 | INFO     | chi2: 1.4422196076740144
[2026-05-02 12:13:10] 2026-05-02 10:10:54,353 | INFO     | current chi2=1.4422196076740144 (change=0.1422167506677409 %)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,353 | INFO     | right removable region: 226
[2026-05-02 12:13:10] 2026-05-02 10:10:54,354 | INFO     | sum of square deviations: 3627000098.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,355 | INFO     | sum of deviations: -50698333786.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,355 | INFO     | mean x (centered): 0.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,355 | INFO     | mean y: 2390634.6387665197
[2026-05-02 12:13:10] 2026-05-02 10:10:54,355 | INFO     | intersect: 2390634.6387665197
[2026-05-02 12:13:10] 2026-05-02 10:10:54,356 | INFO     | chi2: 0.13838749872063189
[2026-05-02 12:13:10] 2026-05-02 10:10:54,356 | INFO     | current chi2=0.13838749872063189 (change=90.41819374932139 %)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,356 | INFO     | sum of square deviations: 3392567795.5
[2026-05-02 12:13:10] 2026-05-02 10:10:54,358 | INFO     | sum of deviations: -42540570125.5
[2026-05-02 12:13:10] 2026-05-02 10:10:54,358 | INFO     | mean x (centered): 0.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,358 | INFO     | mean y: 2385323.1576576577
[2026-05-02 12:13:10] 2026-05-02 10:10:54,358 | INFO     | intersect: 2385323.1576576577
[2026-05-02 12:13:10] 2026-05-02 10:10:54,358 | INFO     | chi2: 0.12043064052853064
[2026-05-02 12:13:10] 2026-05-02 10:10:54,359 | INFO     | current chi2=0.12043064052853064 (change=12.975780585753224 %)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,359 | INFO     | left removable region: 10
[2026-05-02 12:13:10] 2026-05-02 10:10:54,359 | INFO     | sum of square deviations: 3124858590.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,360 | INFO     | sum of deviations: -41419927108.5
[2026-05-02 12:13:10] 2026-05-02 10:10:54,361 | INFO     | mean x (centered): 0.0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,361 | INFO     | mean y: 2386089.625
[2026-05-02 12:13:10] 2026-05-02 10:10:54,361 | INFO     | intersect: 2386089.625
[2026-05-02 12:13:10] 2026-05-02 10:10:54,361 | INFO     | chi2: 0.1169093760688976
[2026-05-02 12:13:10] 2026-05-02 10:10:54,361 | INFO     | current memory leak: -13.25 B/s (using 216 data points, chi2=0.12)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | could have reported an average CPU frequency of 2706 MHz (11 samples)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | ..............................
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . Timing measurements:
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . get job = 0 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . initial setup = 9 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . payload setup = 16 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . stage-in = 0 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . payload execution = 14158 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . stage-out = 1 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | . log creation = 0 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,362 | INFO     | ..............................
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | 
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | job summary report
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | --------------------------------------------------
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | PanDA job id: 7119525602
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | task id: 49863840
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | errors: (none)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 12:13:10] 2026-05-02 10:10:54,459 | INFO     | pilot state: finished 
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | transexitcode: 0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | exeerrorcode: 0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | exeerrordiag: 
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | exitcode: 0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | exitmsg: OK
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | cpuconsumptiontime: 53583 s
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | nevents: 400
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | neventsw: 0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | pid: 665670
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | pgrp: 665670
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | corecount: 4
[2026-05-02 12:13:10] 2026-05-02 10:10:54,460 | INFO     | event service: False
[2026-05-02 12:13:10] 2026-05-02 10:10:54,461 | INFO     | sizes: {0: 2275387, 1: 2277216, 11: 2277216, 14180: 2308468, 14182: 2317490, 14184: 2317546, 14187: 2317868}
[2026-05-02 12:13:10] 2026-05-02 10:10:54,461 | INFO     | --------------------------------------------------
[2026-05-02 12:13:10] 2026-05-02 10:10:54,461 | INFO     | 
[2026-05-02 12:13:10] 2026-05-02 10:10:54,461 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/0
[2026-05-02 12:13:10] 2026-05-02 10:10:54,495 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 12:13:10] 2026-05-02 10:10:54,498 | INFO     | job 7119525602 has completed (purged errors)
[2026-05-02 12:13:10] 2026-05-02 10:10:54,498 | INFO     | overall cleanup function is called
[2026-05-02 12:13:10] 2026-05-02 10:10:55,508 | INFO     | --- collectZombieJob: --- 10, [665670]
[2026-05-02 12:13:10] 2026-05-02 10:10:55,509 | INFO     | zombie collector waiting for pid 665670
[2026-05-02 12:13:10] 2026-05-02 10:10:55,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 12:13:10] 2026-05-02 10:10:55,509 | INFO     | collected zombie processes
[2026-05-02 12:13:10] 2026-05-02 10:10:55,509 | INFO     | will attempt to kill all subprocesses of pid=665670
[2026-05-02 12:13:10] 2026-05-02 10:10:56,217 | INFO     | process IDs to be killed: [665670] (in reverse order)
[2026-05-02 12:13:10] 2026-05-02 10:10:56,553 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 12:13:10] 2026-05-02 10:10:56,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 12:13:10] 2026-05-02 10:10:56,586 | INFO     | did not find any defunct processes belonging to 665670
[2026-05-02 12:13:10] 2026-05-02 10:10:56,614 | INFO     | did not find any defunct processes belonging to 665670
[2026-05-02 12:13:10] 2026-05-02 10:10:56,615 | INFO     | Ready for new job
[2026-05-02 12:13:10] 2026-05-02 10:10:56,617 | INFO     | ***************************************
[2026-05-02 12:13:10] 2026-05-02 10:10:56,617 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 12:13:10] 2026-05-02 10:10:56,617 | INFO     | ***************************************
[2026-05-02 12:13:10] 2026-05-02 10:10:56,617 | INFO     | 
[2026-05-02 12:13:10] 2026-05-02 10:10:56,626 | INFO     | architecture information:
[2026-05-02 12:13:10] 2026-05-02 10:10:56,626 | INFO     | executing command: cat /etc/os-release
[2026-05-02 12:13:10] 2026-05-02 10:10:56,649 | INFO     | cat /etc/os-release:
[2026-05-02 12:13:10] NAME="CentOS Linux"
[2026-05-02 12:13:10] VERSION="7 (Core)"
[2026-05-02 12:13:10] ID="centos"
[2026-05-02 12:13:10] ID_LIKE="rhel fedora"
[2026-05-02 12:13:10] VERSION_ID="7"
[2026-05-02 12:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 12:13:10] ANSI_COLOR="0;31"
[2026-05-02 12:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 12:13:10] HOME_URL="https://www.centos.org/"
[2026-05-02 12:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 12:13:10] 
[2026-05-02 12:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 12:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 12:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 12:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 12:13:10] 
[2026-05-02 12:13:10] 2026-05-02 10:10:56,650 | INFO     | ***************************************
[2026-05-02 12:13:10] 2026-05-02 10:10:57,153 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/0
[2026-05-02 12:13:10] 2026-05-02 10:10:57,179 | INFO     | sufficient remaining disk space (161156694016 B)
[2026-05-02 12:13:10] 2026-05-02 10:10:57,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 12:13:10] 2026-05-02 10:10:57,180 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 12:13:10] 2026-05-02 10:10:57,180 | INFO     | update_server=False
[2026-05-02 12:13:10] 2026-05-02 10:10:57,180 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 12:13:10] 2026-05-02 10:10:57,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 12:13:10] 2026-05-02 10:10:57,251 | INFO     | all payload control threads have been joined
[2026-05-02 12:13:10] 2026-05-02 10:10:57,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 12:13:10] 2026-05-02 10:10:57,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:13:10] 2026-05-02 10:10:57,705 | INFO     | aborting loop
[2026-05-02 12:13:10] 2026-05-02 10:10:57,788 | INFO     | all data control threads have been joined
[2026-05-02 12:13:10] 2026-05-02 10:10:58,186 | INFO     | [job] retrieve thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,208 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,256 | INFO     | [payload] control thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,263 | INFO     | [job] validate thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,368 | INFO     | [data] copytool_in thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,709 | INFO     | [job] job monitor thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,794 | INFO     | [data] control thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:58,797 | INFO     | all job control threads have been joined
[2026-05-02 12:13:10] 2026-05-02 10:10:59,051 | INFO     | [payload] validate_post thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:59,185 | INFO     | [data] copytool_out thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:59,204 | INFO     | [payload] failed_post thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:59,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:13:10] 2026-05-02 10:10:59,489 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:59,616 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:10:59,802 | INFO     | [job] control thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:11:00,474 | INFO     | [job] queue monitor thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:11:01,456 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 12:13:10] 2026-05-02 10:11:26,866 | INFO     | PID=660380 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 12:13:10] 2026-05-02 10:11:26,867 | INFO     | .. there are 21 such processes running
[2026-05-02 12:13:10] 2026-05-02 10:11:26,867 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 12:13:10] 2026-05-02 10:11:26,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 12:13:10] 2026-05-02 10:11:26,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 12:13:10] 2026-05-02 10:11:39,414 | INFO     | [monitor] cgroup control has ended
[2026-05-02 12:13:10] 2026-05-02 10:11:41,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22539079599936)>', '<ExcThread(monitor, started 22538780407552)>']
[2026-05-02 12:13:10] 2026-05-02 10:11:41,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 12:13:10] 2026-05-02 10:11:41,941 | INFO     | [monitor] control thread has ended
[2026-05-02 12:13:10] 2026-05-02 10:11:46,477 | INFO     | all workflow threads have been joined
[2026-05-02 12:13:10] 2026-05-02 10:11:46,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 12:13:10] 2026-05-02 10:11:46,477 | INFO     | traces error code: 0
[2026-05-02 12:13:10] 2026-05-02 10:11:46,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 12:13:10] 2026-05-02 10:11:46,628 [wrapper] ==== pilot stdout END ====
[2026-05-02 12:13:10] 2026-05-02 10:11:46,632 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 12:13:10] 2026-05-02 10:11:46,637 [wrapper] pilotpid: 660380
[2026-05-02 12:13:10] 2026-05-02 10:11:46,641 [wrapper] Pilot exit status: 0
[2026-05-02 12:13:10] 2026-05-02 10:11:46,656 [wrapper] pandaids: 7119525602
[2026-05-02 12:13:10] 2026-05-02 10:11:46,871 [wrapper] cleanup supervisor_pilot 1187553 660381
[2026-05-02 12:13:10] 2026-05-02 10:11:46,876 [wrapper] Test setup, not cleaning
[2026-05-02 12:13:10] 2026-05-02 10:11:46,880 [wrapper] apfmon messages muted
[2026-05-02 12:13:10] 2026-05-02 10:11:46,884 [wrapper] ==== wrapper stdout END ====
[2026-05-02 12:13:10] 2026-05-02 10:11:46,888 [wrapper] ==== wrapper stderr END ====
[2026-05-02 12:13:10]  *** Error codes and diagnostics ***
[2026-05-02 12:13:10]     "exeErrorCode": 0,
[2026-05-02 12:13:10]     "pilotErrorCode": 0,
[2026-05-02 12:13:10]  *** Listing of results directory ***
[2026-05-02 12:13:10] total 474504
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc    683926 Apr 30 01:05 pilot3.tar.gz
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc      5631 Apr 30 01:50 queuedata.json
[2026-05-02 12:13:10] -rwx------. 1 boinc boinc     36322 Apr 30 01:50 runpilot2-wrapper.sh
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc       100 May  2 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 12:13:10] -rwxr-xr-x. 1 boinc boinc      7986 May  2 08:13 run_atlas
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc       105 May  2 08:13 job.xml
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc      6541 May  2 08:13 init_data.xml
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc 262532347 May  2 08:13 EVNT.49863838._000210.pool.root.1
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc     15667 May  2 08:13 start_atlas.sh
[2026-05-02 12:13:10] drwxrwx--x. 2 boinc boinc      4096 May  2 08:13 shared
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc    697422 May  2 08:13 input.tar.gz
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc         0 May  2 08:13 boinc_lockfile
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc      2591 May  2 08:13 pandaJob.out
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc   1002976 May  2 08:14 agis_schedconf.cvmfs.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc       443 May  2 08:14 workernode_map.json
[2026-05-02 12:13:10] drwx------. 5 boinc boinc      4096 May  2 08:14 pilot3
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc 215939502 May  2 12:10 HITS.49863840._005253.pool.root.1
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc       487 May  2 12:10 boinc_task_state.xml
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc      1030 May  2 12:10 memory_monitor_summary.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc        95 May  2 12:10 pilot_heartbeat.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc   1508687 May  2 12:10 agis_ddmendpoints.agis.ALL.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc    345278 May  2 12:10 log.49863840._005253.job.log.tgz.1
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc      6379 May  2 12:10 heartbeat_new.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc      6270 May  2 12:10 heartbeat.json
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc      4834 May  2 12:11 pilotlog.txt
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc   1295610 May  2 12:11 log.49863840._005253.job.log.1
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc       357 May  2 12:11 output.list
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc       410 May  2 12:11 runtime_log
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc   1658880 May  2 12:11 result.tar.gz
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc       667 May  2 12:11 994398d37be8.diag
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc      8845 May  2 12:11 runtime_log.err
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc        27 May  2 12:12 wrapper_checkpoint.txt
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc      8192 May  2 12:13 boinc_mmap_file
[2026-05-02 12:13:10] -rw-r--r--. 1 boinc boinc     21090 May  2 12:13 stderr.txt
[2026-05-02 12:13:10] HITS file was successfully produced:
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc 215939502 May  2 12:10 shared/HITS.pool.root.1
[2026-05-02 12:13:10]  *** Contents of shared directory: ***
[2026-05-02 12:13:10] total 469588
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc 262532347 May  2 08:13 ATLAS.root_0
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc     15667 May  2 08:13 start_atlas.sh
[2026-05-02 12:13:10] -rw-r--r--. 2 boinc boinc    697422 May  2 08:13 input.tar.gz
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc 215939502 May  2 12:10 HITS.pool.root.1
[2026-05-02 12:13:10] -rw-------. 1 boinc boinc   1658880 May  2 12:11 result.tar.gz
12:13:11 (656243): run_atlas exited; CPU time 54439.842503
12:13:11 (656243): called boinc_finish(0)

</stderr_txt>
]]>

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