Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:57 (13945): wrapper (7.7.26015): starting
06:04:57 (13945): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 06:04:57] Arguments: --nthreads 8
[2026-04-30 06:04:57] Threads: 8
[2026-04-30 06:04:57] Checking for CVMFS
[2026-04-30 06:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 06:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 06:04:57] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 06:04:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 06:04:57] 2.11.2.0 21848 20827 99132 159030 2 222 16477310 25165825 4 130560 0 6214303 99.848 5766714 5579 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 06:04:57] CVMFS is ok
[2026-04-30 06:04:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 06:04:57] Checking for apptainer binary...
[2026-04-30 06:04:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 06:04:57] Running /usr/bin/apptainer --version
[2026-04-30 06:04:57] apptainer version 1.3.2-1.el7
[2026-04-30 06:04:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 06:04:59] cg-vwn454.simple-grid.lan
[2026-04-30 06:04:59] apptainer works
[2026-04-30 06:04:59] Set ATHENA_PROC_NUMBER=8
[2026-04-30 06:04:59] Set ATHENA_CORE_NUMBER=8
[2026-04-30 06:04:59] Starting ATLAS job with PandaID=7119506248
[2026-04-30 06:04:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 11:22:10]  *** The last 200 lines of the pilot log: ***
[2026-04-30 11:22:10] 2026-04-30 09:21:23,178 | INFO     | this job has now completed (state=finished)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,178 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,178 | INFO     | log transfer has been attempted: DONE
[2026-04-30 11:22:10] 2026-04-30 09:21:23,179 | INFO     | job 7119506248 has finished - writing final server update
[2026-04-30 11:22:10] 2026-04-30 09:21:23,179 | INFO     | total number of processed events: 400 (read)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,181 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7119506248/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,182 | INFO     | extracted standard info from prmon json
[2026-04-30 11:22:10] 2026-04-30 09:21:23,182 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 11:22:10] 2026-04-30 09:21:23,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 11:22:10] 2026-04-30 09:21:23,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 11:22:10] 2026-04-30 09:21:23,188 | INFO     | fitting pss+swap vs Time
[2026-04-30 11:22:10] 2026-04-30 09:21:23,195 | INFO     | sum of square deviations: 9237596457.5
[2026-04-30 11:22:10] 2026-04-30 09:21:23,201 | INFO     | sum of deviations: 62275198350.99999
[2026-04-30 11:22:10] 2026-04-30 09:21:23,201 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,201 | INFO     | mean y: 2501903.541935484
[2026-04-30 11:22:10] 2026-04-30 09:21:23,202 | INFO     | intersect: 2501903.541935484
[2026-04-30 11:22:10] 2026-04-30 09:21:23,202 | INFO     | chi2: 2.430581124146178
[2026-04-30 11:22:10] 2026-04-30 09:21:23,203 | INFO     | sum of square deviations: 8797783560.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,206 | INFO     | sum of deviations: 82021622908.99998
[2026-04-30 11:22:10] 2026-04-30 09:21:23,206 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,206 | INFO     | mean y: 2508655.8983606556
[2026-04-30 11:22:10] 2026-04-30 09:21:23,206 | INFO     | intersect: 2508655.8983606556
[2026-04-30 11:22:10] 2026-04-30 09:21:23,207 | INFO     | chi2: 1.6512607251262357
[2026-04-30 11:22:10] 2026-04-30 09:21:23,207 | INFO     | current chi2=1.6512607251262357 (change=32.06313055252185 %)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,207 | INFO     | sum of square deviations: 8372156975.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,210 | INFO     | sum of deviations: 80553524807.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,210 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,210 | INFO     | mean y: 2508129.84
[2026-04-30 11:22:10] 2026-04-30 09:21:23,211 | INFO     | intersect: 2508129.84
[2026-04-30 11:22:10] 2026-04-30 09:21:23,211 | INFO     | chi2: 1.6509713878968546
[2026-04-30 11:22:10] 2026-04-30 09:21:23,211 | INFO     | current chi2=1.6509713878968546 (change=0.01752220136883296 %)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,211 | INFO     | right removable region: 299
[2026-04-30 11:22:10] 2026-04-30 09:21:23,212 | INFO     | sum of square deviations: 8797783560.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,215 | INFO     | sum of deviations: 7148012269.000004
[2026-04-30 11:22:10] 2026-04-30 09:21:23,215 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,215 | INFO     | mean y: 2520908.731147541
[2026-04-30 11:22:10] 2026-04-30 09:21:23,215 | INFO     | intersect: 2520908.731147541
[2026-04-30 11:22:10] 2026-04-30 09:21:23,216 | INFO     | chi2: 0.865335138734153
[2026-04-30 11:22:10] 2026-04-30 09:21:23,216 | INFO     | current chi2=0.865335138734153 (change=64.39801452674695 %)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,216 | INFO     | sum of square deviations: 8372156975.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,219 | INFO     | sum of deviations: -5353077448.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,219 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,219 | INFO     | mean y: 2525375.006666667
[2026-04-30 11:22:10] 2026-04-30 09:21:23,220 | INFO     | intersect: 2525375.006666667
[2026-04-30 11:22:10] 2026-04-30 09:21:23,220 | INFO     | chi2: 0.8021265110244705
[2026-04-30 11:22:10] 2026-04-30 09:21:23,220 | INFO     | current chi2=0.8021265110244705 (change=7.304525712678976 %)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,220 | INFO     | left removable region: 10
[2026-04-30 11:22:10] 2026-04-30 09:21:23,221 | INFO     | sum of square deviations: 7484568240.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,223 | INFO     | sum of deviations: 14436033751.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,224 | INFO     | mean x (centered): 0.0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,224 | INFO     | mean y: 2532599.096885813
[2026-04-30 11:22:10] 2026-04-30 09:21:23,224 | INFO     | intersect: 2532599.096885813
[2026-04-30 11:22:10] 2026-04-30 09:21:23,224 | INFO     | chi2: 0.01005446736858799
[2026-04-30 11:22:10] 2026-04-30 09:21:23,225 | INFO     | current memory leak: 1.93 B/s (using 289 data points, chi2=0.01)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,225 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,225 | INFO     | ..............................
[2026-04-30 11:22:10] 2026-04-30 09:21:23,225 | INFO     | . Timing measurements:
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . get job = 0 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . initial setup = 7 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . payload setup = 20 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . stage-in = 0 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . payload execution = 18913 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . stage-out = 4 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | . log creation = 1 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,226 | INFO     | ..............................
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | 
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | job summary report
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | --------------------------------------------------
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | PanDA job id: 7119506248
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | task id: 49863840
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | errors: (none)
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 11:22:10] 2026-04-30 09:21:23,386 | INFO     | pilot state: finished 
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | transexitcode: 0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | exeerrorcode: 0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | exeerrordiag: 
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | exitcode: 0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | exitmsg: OK
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | cpuconsumptiontime: 73759 s
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | nevents: 400
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | neventsw: 0
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | pid: 29004
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | pgrp: 29004
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | corecount: 8
[2026-04-30 11:22:10] 2026-04-30 09:21:23,387 | INFO     | event service: False
[2026-04-30 11:22:10] 2026-04-30 09:21:23,388 | INFO     | sizes: {0: 2280729, 1: 2282558, 12: 2282558, 18937: 2315284, 18938: 2315283, 18942: 2320758, 18943: 2320942, 18945: 2321136}
[2026-04-30 11:22:10] 2026-04-30 09:21:23,388 | INFO     | --------------------------------------------------
[2026-04-30 11:22:10] 2026-04-30 09:21:23,388 | INFO     | 
[2026-04-30 11:22:10] 2026-04-30 09:21:23,388 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-04-30 11:22:10] 2026-04-30 09:21:24,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 11:22:10] 2026-04-30 09:21:24,172 | INFO     | job 7119506248 has completed (purged errors)
[2026-04-30 11:22:10] 2026-04-30 09:21:24,173 | INFO     | overall cleanup function is called
[2026-04-30 11:22:10] 2026-04-30 09:21:25,181 | INFO     | --- collectZombieJob: --- 10, [29004]
[2026-04-30 11:22:10] 2026-04-30 09:21:25,181 | INFO     | zombie collector waiting for pid 29004
[2026-04-30 11:22:10] 2026-04-30 09:21:25,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 11:22:10] 2026-04-30 09:21:25,181 | INFO     | collected zombie processes
[2026-04-30 11:22:10] 2026-04-30 09:21:25,181 | INFO     | will attempt to kill all subprocesses of pid=29004
[2026-04-30 11:22:10] 2026-04-30 09:21:25,234 | INFO     | process IDs to be killed: [29004] (in reverse order)
[2026-04-30 11:22:10] 2026-04-30 09:21:26,100 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 11:22:10] 2026-04-30 09:21:26,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 11:22:10] 2026-04-30 09:21:26,102 | INFO     | did not find any defunct processes belonging to 29004
[2026-04-30 11:22:10] 2026-04-30 09:21:26,104 | INFO     | did not find any defunct processes belonging to 29004
[2026-04-30 11:22:10] 2026-04-30 09:21:26,104 | INFO     | Ready for new job
[2026-04-30 11:22:10] 2026-04-30 09:21:26,106 | INFO     | ***************************************
[2026-04-30 11:22:10] 2026-04-30 09:21:26,106 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 11:22:10] 2026-04-30 09:21:26,106 | INFO     | ***************************************
[2026-04-30 11:22:10] 2026-04-30 09:21:26,106 | INFO     | 
[2026-04-30 11:22:10] 2026-04-30 09:21:26,107 | INFO     | pilot is running in a VM
[2026-04-30 11:22:10] 2026-04-30 09:21:26,107 | INFO     | architecture information:
[2026-04-30 11:22:10] 2026-04-30 09:21:26,116 | INFO     | executing command: cat /etc/os-release
[2026-04-30 11:22:10] 2026-04-30 09:21:26,448 | INFO     | cat /etc/os-release:
[2026-04-30 11:22:10] NAME="CentOS Linux"
[2026-04-30 11:22:10] VERSION="7 (Core)"
[2026-04-30 11:22:10] ID="centos"
[2026-04-30 11:22:10] ID_LIKE="rhel fedora"
[2026-04-30 11:22:10] VERSION_ID="7"
[2026-04-30 11:22:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 11:22:10] ANSI_COLOR="0;31"
[2026-04-30 11:22:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 11:22:10] HOME_URL="https://www.centos.org/"
[2026-04-30 11:22:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 11:22:10] 
[2026-04-30 11:22:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 11:22:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 11:22:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 11:22:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 11:22:10] 
[2026-04-30 11:22:10] 2026-04-30 09:21:26,448 | INFO     | ***************************************
[2026-04-30 11:22:10] 2026-04-30 09:21:26,952 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-04-30 11:22:10] 2026-04-30 09:21:27,221 | INFO     | sufficient remaining disk space (496868786176 B)
[2026-04-30 11:22:10] 2026-04-30 09:21:27,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 11:22:10] 2026-04-30 09:21:27,222 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 11:22:10] 2026-04-30 09:21:27,222 | INFO     | update_server=False
[2026-04-30 11:22:10] 2026-04-30 09:21:27,222 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 11:22:10] 2026-04-30 09:21:27,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 11:22:10] 2026-04-30 09:21:27,431 | INFO     | all data control threads have been joined
[2026-04-30 11:22:10] 2026-04-30 09:21:27,507 | INFO     | all payload control threads have been joined
[2026-04-30 11:22:10] 2026-04-30 09:21:27,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 11:22:10] 2026-04-30 09:21:27,745 | INFO     | aborting loop
[2026-04-30 11:22:10] 2026-04-30 09:21:28,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 11:22:10] 2026-04-30 09:21:28,228 | INFO     | [job] retrieve thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,241 | INFO     | [payload] validate_post thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,393 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 11:22:10] 2026-04-30 09:21:28,437 | INFO     | [data] control thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,514 | INFO     | [payload] control thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,674 | INFO     | [payload] failed_post thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,751 | INFO     | [job] job monitor thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,776 | INFO     | all job control threads have been joined
[2026-04-30 11:22:10] 2026-04-30 09:21:28,924 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:28,957 | INFO     | [data] copytool_in thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:29,110 | INFO     | [job] validate thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:29,244 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:29,411 | INFO     | [job] queue monitor thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:29,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:29,782 | INFO     | [job] control thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:30,184 | INFO     | [data] copytool_out thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:31,329 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 11:22:10] 2026-04-30 09:21:56,958 | INFO     | PID=21126 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 11:22:10] 2026-04-30 09:21:56,958 | INFO     | .. there are 2 such processes running
[2026-04-30 11:22:10] 2026-04-30 09:21:56,965 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 11:22:10] 2026-04-30 09:21:56,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 11:22:10] 2026-04-30 09:21:56,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 11:22:10] 2026-04-30 09:21:59,318 | INFO     | [monitor] cgroup control has ended
[2026-04-30 11:22:10] 2026-04-30 09:22:00,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293510956864)>', '<ExcThread(monitor, started 140293076670208)>']
[2026-04-30 11:22:10] 2026-04-30 09:22:00,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 11:22:10] 2026-04-30 09:22:00,989 | INFO     | [monitor] control thread has ended
[2026-04-30 11:22:10] 2026-04-30 09:22:05,567 | INFO     | all workflow threads have been joined
[2026-04-30 11:22:10] 2026-04-30 09:22:05,567 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 11:22:10] 2026-04-30 09:22:05,567 | INFO     | traces error code: 0
[2026-04-30 11:22:10] 2026-04-30 09:22:05,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 11:22:10] 2026-04-30 09:22:05,858 [wrapper] ==== pilot stdout END ====
[2026-04-30 11:22:10] 2026-04-30 09:22:05,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 11:22:10] 2026-04-30 09:22:06,076 [wrapper] pilotpid: 21126
[2026-04-30 11:22:10] 2026-04-30 09:22:06,188 [wrapper] Pilot exit status: 0
[2026-04-30 11:22:10] 2026-04-30 09:22:06,748 [wrapper] pandaids: 7119506248
[2026-04-30 11:22:10] 2026-04-30 09:22:07,628 [wrapper] cleanup supervisor_pilot  4342 21127
[2026-04-30 11:22:10] 2026-04-30 09:22:07,734 [wrapper] Test setup, not cleaning
[2026-04-30 11:22:10] 2026-04-30 09:22:07,847 [wrapper] apfmon messages muted
[2026-04-30 11:22:10] 2026-04-30 09:22:07,911 [wrapper] ==== wrapper stdout END ====
[2026-04-30 11:22:10] 2026-04-30 09:22:08,030 [wrapper] ==== wrapper stderr END ====
[2026-04-30 11:22:10]  *** Error codes and diagnostics ***
[2026-04-30 11:22:10]     "exeErrorCode": 0,
[2026-04-30 11:22:10]     "pilotErrorCode": 0,
[2026-04-30 11:22:10]  *** Listing of results directory ***
[2026-04-30 11:22:10] total 471828
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc    683926 Apr 30 01:05 pilot3.tar.gz
[2026-04-30 11:22:10] -rwx------. 1 boinc boinc     36322 Apr 30 01:49 runpilot2-wrapper.sh
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc      5631 Apr 30 01:50 queuedata.json
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc       100 Apr 30 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 11:22:10] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 06:04 run_atlas
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc       105 Apr 30 06:04 job.xml
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc      6306 Apr 30 06:04 init_data.xml
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc 258860276 Apr 30 06:04 EVNT.49863838._000205.pool.root.1
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc     15667 Apr 30 06:04 start_atlas.sh
[2026-04-30 11:22:10] drwxrwx--x. 2 boinc boinc        68 Apr 30 06:04 shared
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc    697421 Apr 30 06:04 input.tar.gz
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc         0 Apr 30 06:04 boinc_lockfile
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc      2591 Apr 30 06:04 pandaJob.out
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc   1001878 Apr 30 06:05 agis_schedconf.cvmfs.json
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc       413 Apr 30 06:05 workernode_map.json
[2026-04-30 11:22:10] drwx------. 5 boinc boinc      4096 Apr 30 06:05 pilot3
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc 215796960 Apr 30 11:19 HITS.49863840._005115.pool.root.1
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc       488 Apr 30 11:20 boinc_task_state.xml
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc      1017 Apr 30 11:21 memory_monitor_summary.json
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc   1510841 Apr 30 11:21 agis_ddmendpoints.agis.ALL.json
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc    430988 Apr 30 11:21 log.49863840._005115.job.log.tgz.1
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc      6330 Apr 30 11:21 heartbeat_new.json
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc      6221 Apr 30 11:21 heartbeat.json
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc        95 Apr 30 11:21 pilot_heartbeat.json
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc      8192 Apr 30 11:21 boinc_mmap_file
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc        28 Apr 30 11:21 wrapper_checkpoint.txt
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc      4883 Apr 30 11:22 pilotlog.txt
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc   1753461 Apr 30 11:22 log.49863840._005115.job.log.1
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc       357 Apr 30 11:22 output.list
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc       410 Apr 30 11:22 runtime_log
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc   2201600 Apr 30 11:22 result.tar.gz
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc      8439 Apr 30 11:22 runtime_log.err
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc       656 Apr 30 11:22 9904f1d127c3.diag
[2026-04-30 11:22:10] -rw-r--r--. 1 boinc boinc     20614 Apr 30 11:22 stderr.txt
[2026-04-30 11:22:10] HITS file was successfully produced:
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc 215796960 Apr 30 11:19 shared/HITS.pool.root.1
[2026-04-30 11:22:10]  *** Contents of shared directory: ***
[2026-04-30 11:22:10] total 466388
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc 258860276 Apr 30 06:04 ATLAS.root_0
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc     15667 Apr 30 06:04 start_atlas.sh
[2026-04-30 11:22:10] -rw-r--r--. 2 boinc boinc    697421 Apr 30 06:04 input.tar.gz
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc 215796960 Apr 30 11:19 HITS.pool.root.1
[2026-04-30 11:22:10] -rw-------. 1 boinc boinc   2201600 Apr 30 11:22 result.tar.gz
11:22:12 (13945): run_atlas exited; CPU time 73902.157487
11:22:12 (13945): called boinc_finish(0)

</stderr_txt>
]]>

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