Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:33:31 (4128042): wrapper (7.7.26015): starting
22:33:31 (4128042): wrapper: running run_atlas (--nthreads 4)
[2026-04-30 22:33:31] Arguments: --nthreads 4
[2026-04-30 22:33:31] Threads: 4
[2026-04-30 22:33:31] Checking for CVMFS
[2026-04-30 22:33:31] No cvmfs_config command found, will try listing directly
[2026-04-30 22:33:31] CVMFS is ok
[2026-04-30 22:33:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 22:33:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 22:33:31] Further information can be found at the LHC@home message board.
[2026-04-30 22:33:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 22:33:31] Checking for apptainer binary...
[2026-04-30 22:33:31] which: no apptainer in ((null))
[2026-04-30 22:33:31] apptainer is not installed, using version from CVMFS
[2026-04-30 22:33:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 22:33:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-04-30 22:33:31] apptainer works
[2026-04-30 22:33:31] Set ATHENA_PROC_NUMBER=4
[2026-04-30 22:33:31] Set ATHENA_CORE_NUMBER=4
[2026-04-30 22:33:31] Starting ATLAS job with PandaID=7117357741
[2026-04-30 22:33:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 02:44:19]  *** The last 200 lines of the pilot log: ***
[2026-05-01 02:44:19] 2026-05-01 00:43:21,662 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 02:44:19] 2026-05-01 00:43:22,111 | INFO     | monitor loop #1086: job 0:7117357741 is in state 'finished'
[2026-05-01 02:44:19] 2026-05-01 00:43:22,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,512 | INFO     | job 7117357741 has state=finished
[2026-05-01 02:44:19] 2026-05-01 00:43:22,512 | INFO     | preparing for final server update for job 7117357741 in state='finished'
[2026-05-01 02:44:19] 2026-05-01 00:43:22,512 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7117357741/jobReport.json
[2026-05-01 02:44:19] 2026-05-01 00:43:22,515 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/3/workernode_map.json
[2026-05-01 02:44:19] 2026-05-01 00:43:22,515 | INFO     | this job has now completed (state=finished)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,516 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,516 | INFO     | log transfer has been attempted: DONE
[2026-05-01 02:44:19] 2026-05-01 00:43:22,516 | INFO     | job 7117357741 has finished - writing final server update
[2026-05-01 02:44:19] 2026-05-01 00:43:22,516 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3891282/.job.ad'
[2026-05-01 02:44:19] 2026-05-01 00:43:22,517 | INFO     | total number of processed events: 400 (read)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,528 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7117357741/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,529 | INFO     | extracted standard info from prmon json
[2026-05-01 02:44:19] 2026-05-01 00:43:22,529 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 02:44:19] 2026-05-01 00:43:22,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 02:44:19] 2026-05-01 00:43:22,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 02:44:19] 2026-05-01 00:43:22,534 | INFO     | fitting pss+swap vs Time
[2026-05-01 02:44:19] 2026-05-01 00:43:22,534 | INFO     | sum of square deviations: 4560048290.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,536 | INFO     | sum of deviations: 21300024896.000004
[2026-05-01 02:44:19] 2026-05-01 00:43:22,536 | INFO     | mean x (centered): 0.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,536 | INFO     | mean y: 2328463.8775510206
[2026-05-01 02:44:19] 2026-05-01 00:43:22,536 | INFO     | intersect: 2328463.8775510206
[2026-05-01 02:44:19] 2026-05-01 00:43:22,537 | INFO     | chi2: 1.4219470073243086
[2026-05-01 02:44:19] 2026-05-01 00:43:22,537 | INFO     | sum of square deviations: 4286517580.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | sum of deviations: 20478548388.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | mean x (centered): 0.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | mean y: 2328005.9916666667
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | intersect: 2328005.9916666667
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | chi2: 1.4224148638397496
[2026-05-01 02:44:19] 2026-05-01 00:43:22,539 | INFO     | current chi2=1.4224148638397496 (change=-0.03290252822581497 %)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,540 | INFO     | right removable region: 239
[2026-05-01 02:44:19] 2026-05-01 00:43:22,540 | INFO     | sum of square deviations: 4286517580.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,541 | INFO     | sum of deviations: -12403162604.499998
[2026-05-01 02:44:19] 2026-05-01 00:43:22,542 | INFO     | mean x (centered): 0.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,542 | INFO     | mean y: 2347072.1958333333
[2026-05-01 02:44:19] 2026-05-01 00:43:22,542 | INFO     | intersect: 2347072.1958333333
[2026-05-01 02:44:19] 2026-05-01 00:43:22,542 | INFO     | chi2: 0.026870373579899222
[2026-05-01 02:44:19] 2026-05-01 00:43:22,542 | INFO     | current chi2=0.026870373579899222 (change=98.1103111830826 %)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,543 | INFO     | sum of square deviations: 4024149870.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,544 | INFO     | sum of deviations: -11295450459.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,544 | INFO     | mean x (centered): 0.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,544 | INFO     | mean y: 2346426.055319149
[2026-05-01 02:44:19] 2026-05-01 00:43:22,544 | INFO     | intersect: 2346426.055319149
[2026-05-01 02:44:19] 2026-05-01 00:43:22,545 | INFO     | chi2: 0.026709659477592972
[2026-05-01 02:44:19] 2026-05-01 00:43:22,545 | INFO     | current chi2=0.026709659477592972 (change=0.5981089240473908 %)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,545 | INFO     | left removable region: 10
[2026-05-01 02:44:19] 2026-05-01 00:43:22,545 | INFO     | sum of square deviations: 3723716330.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | sum of deviations: -11461143844.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | mean x (centered): 0.0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | mean y: 2346325.3886462883
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | intersect: 2346325.3886462883
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | chi2: 0.026034906131003007
[2026-05-01 02:44:19] 2026-05-01 00:43:22,547 | INFO     | current memory leak: -3.08 B/s (using 229 data points, chi2=0.03)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | could have reported an average CPU frequency of 2493 MHz (12 samples)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | ..............................
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | . Timing measurements:
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | . get job = 0 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | . initial setup = 6 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,548 | INFO     | . payload setup = 10 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,549 | INFO     | . stage-in = 0 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,549 | INFO     | . payload execution = 14940 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,549 | INFO     | . stage-out = 1 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,549 | INFO     | . log creation = 0 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,549 | INFO     | ..............................
[2026-05-01 02:44:19] 2026-05-01 00:43:22,790 | INFO     | 
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | job summary report
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | --------------------------------------------------
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | PanDA job id: 7117357741
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | task id: 49645815
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | errors: (none)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | pilot state: finished 
[2026-05-01 02:44:19] 2026-05-01 00:43:22,791 | INFO     | transexitcode: 0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | exeerrorcode: 0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | exeerrordiag: 
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | exitcode: 0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | exitmsg: OK
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | cpuconsumptiontime: 56976 s
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | nevents: 400
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | neventsw: 0
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | pid: 4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | pgrp: 4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | corecount: 4
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | event service: False
[2026-05-01 02:44:19] 2026-05-01 00:43:22,792 | INFO     | sizes: {0: 2276633, 1: 2278462, 11: 2278462, 14956: 2309347, 14959: 2318367, 14962: 2318423, 14963: 2318745}
[2026-05-01 02:44:19] 2026-05-01 00:43:22,793 | INFO     | --------------------------------------------------
[2026-05-01 02:44:19] 2026-05-01 00:43:22,793 | INFO     | 
[2026-05-01 02:44:19] 2026-05-01 00:43:22,793 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-05-01 02:44:19] 2026-05-01 00:43:22,816 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,816 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,816 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | job 7117357741 has completed (purged errors)
[2026-05-01 02:44:19] 2026-05-01 00:43:22,818 | INFO     | overall cleanup function is called
[2026-05-01 02:44:19] 2026-05-01 00:43:23,825 | INFO     | --- collectZombieJob: --- 10, [4136665]
[2026-05-01 02:44:19] 2026-05-01 00:43:23,826 | INFO     | zombie collector waiting for pid 4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:23,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 02:44:19] 2026-05-01 00:43:23,826 | INFO     | collected zombie processes
[2026-05-01 02:44:19] 2026-05-01 00:43:23,826 | INFO     | will attempt to kill all subprocesses of pid=4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:24,126 | INFO     | process IDs to be killed: [4136665] (in reverse order)
[2026-05-01 02:44:19] 2026-05-01 00:43:24,250 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 02:44:19] 2026-05-01 00:43:24,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 02:44:19] 2026-05-01 00:43:24,262 | INFO     | did not find any defunct processes belonging to 4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:24,273 | INFO     | did not find any defunct processes belonging to 4136665
[2026-05-01 02:44:19] 2026-05-01 00:43:24,273 | INFO     | Ready for new job
[2026-05-01 02:44:19] 2026-05-01 00:43:24,276 | INFO     | ***************************************
[2026-05-01 02:44:19] 2026-05-01 00:43:24,276 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 02:44:19] 2026-05-01 00:43:24,276 | INFO     | ***************************************
[2026-05-01 02:44:19] 2026-05-01 00:43:24,276 | INFO     | 
[2026-05-01 02:44:19] 2026-05-01 00:43:24,280 | INFO     | architecture information:
[2026-05-01 02:44:19] 2026-05-01 00:43:24,282 | INFO     | executing command: cat /etc/os-release
[2026-05-01 02:44:19] 2026-05-01 00:43:24,301 | INFO     | cat /etc/os-release:
[2026-05-01 02:44:19] NAME="CentOS Linux"
[2026-05-01 02:44:19] VERSION="7 (Core)"
[2026-05-01 02:44:19] ID="centos"
[2026-05-01 02:44:19] ID_LIKE="rhel fedora"
[2026-05-01 02:44:19] VERSION_ID="7"
[2026-05-01 02:44:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 02:44:19] ANSI_COLOR="0;31"
[2026-05-01 02:44:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 02:44:19] HOME_URL="https://www.centos.org/"
[2026-05-01 02:44:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 02:44:19] 
[2026-05-01 02:44:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 02:44:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 02:44:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 02:44:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 02:44:19] 
[2026-05-01 02:44:19] 2026-05-01 00:43:24,301 | INFO     | ***************************************
[2026-05-01 02:44:19] 2026-05-01 00:43:24,804 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-05-01 02:44:19] 2026-05-01 00:43:24,822 | INFO     | sufficient remaining disk space (23133683712 B)
[2026-05-01 02:44:19] 2026-05-01 00:43:24,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 02:44:19] 2026-05-01 00:43:24,823 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 02:44:19] 2026-05-01 00:43:24,823 | INFO     | update_server=False
[2026-05-01 02:44:19] 2026-05-01 00:43:24,823 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 02:44:19] 2026-05-01 00:43:24,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 02:44:19] 2026-05-01 00:43:24,962 | INFO     | all data control threads have been joined
[2026-05-01 02:44:19] 2026-05-01 00:43:25,344 | INFO     | all payload control threads have been joined
[2026-05-01 02:44:19] 2026-05-01 00:43:25,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 02:44:19] 2026-05-01 00:43:25,620 | INFO     | aborting loop
[2026-05-01 02:44:19] 2026-05-01 00:43:25,829 | INFO     | [job] retrieve thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:25,940 | INFO     | all job control threads have been joined
[2026-05-01 02:44:19] 2026-05-01 00:43:25,968 | INFO     | [data] control thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,349 | INFO     | [payload] control thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,384 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,625 | INFO     | [job] job monitor thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,644 | INFO     | [job] validate thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,684 | INFO     | [data] copytool_in thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,829 | INFO     | [data] copytool_out thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,829 | INFO     | [payload] validate_post thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,902 | INFO     | [payload] failed_post thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:26,946 | INFO     | [job] control thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:27,037 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:27,148 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:27,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 02:44:19] 2026-05-01 00:43:27,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 02:44:19] 2026-05-01 00:43:28,669 | INFO     | [job] queue monitor thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:31,766 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 02:44:19] 2026-05-01 00:43:55,811 | INFO     | PID=4131815 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 02:44:19] 2026-05-01 00:43:55,811 | INFO     | .. there are 15 such processes running
[2026-05-01 02:44:19] 2026-05-01 00:43:55,812 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 02:44:19] 2026-05-01 00:43:55,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 02:44:19] 2026-05-01 00:43:55,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 02:44:19] 2026-05-01 00:44:13,730 | INFO     | [monitor] cgroup control has ended
[2026-05-01 02:44:19] 2026-05-01 00:44:13,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22710865905472)>', '<ExcThread(monitor, started 22710559450880)>']
[2026-05-01 02:44:19] 2026-05-01 00:44:14,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 02:44:19] 2026-05-01 00:44:14,907 | INFO     | [monitor] control thread has ended
[2026-05-01 02:44:19] 2026-05-01 00:44:19,016 | INFO     | all workflow threads have been joined
[2026-05-01 02:44:19] 2026-05-01 00:44:19,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 02:44:19] 2026-05-01 00:44:19,017 | INFO     | traces error code: 0
[2026-05-01 02:44:19] 2026-05-01 00:44:19,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 02:44:19] 2026-05-01 00:44:19,198 [wrapper] ==== pilot stdout END ====
[2026-05-01 02:44:19] 2026-05-01 00:44:19,201 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 02:44:19] 2026-05-01 00:44:19,204 [wrapper] pilotpid: 4131815
[2026-05-01 02:44:19] 2026-05-01 00:44:19,206 [wrapper] Pilot exit status: 0
[2026-05-01 02:44:19] 2026-05-01 00:44:19,218 [wrapper] pandaids: 7117357741
[2026-05-01 02:44:19] 2026-05-01 00:44:19,292 [wrapper] cleanup supervisor_pilot  243809 4131816
[2026-05-01 02:44:19] 2026-05-01 00:44:19,295 [wrapper] Test setup, not cleaning
[2026-05-01 02:44:19] 2026-05-01 00:44:19,299 [wrapper] apfmon messages muted
[2026-05-01 02:44:19] 2026-05-01 00:44:19,302 [wrapper] ==== wrapper stdout END ====
[2026-05-01 02:44:19] 2026-05-01 00:44:19,304 [wrapper] ==== wrapper stderr END ====
[2026-05-01 02:44:19]  *** Error codes and diagnostics ***
[2026-05-01 02:44:19]     "exeErrorCode": 0,
[2026-05-01 02:44:19]     "pilotErrorCode": 0,
[2026-05-01 02:44:19]  *** Listing of results directory ***
[2026-05-01 02:44:19] total 418472
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc    683926 Apr 29 21:17 pilot3.tar.gz
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc      5631 Apr 29 21:43 queuedata.json
[2026-05-01 02:44:19] -rwx------. 1 boinc boinc     36322 Apr 29 21:43 runpilot2-wrapper.sh
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc       100 Apr 30 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 02:44:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 22:33 run_atlas
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc       105 Apr 30 22:33 job.xml
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc      6483 Apr 30 22:33 init_data.xml
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc 223291546 Apr 30 22:33 EVNT.48629115._000051.pool.root.1
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:33 start_atlas.sh
[2026-05-01 02:44:19] drwxrwx--x. 2 boinc boinc      4096 Apr 30 22:33 shared
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc    697439 Apr 30 22:33 input.tar.gz
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc         0 Apr 30 22:33 boinc_lockfile
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc      2624 Apr 30 22:33 pandaJob.out
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc    997574 Apr 30 22:33 agis_schedconf.cvmfs.json
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc       451 Apr 30 22:33 workernode_map.json
[2026-05-01 02:44:19] drwx------. 5 boinc boinc      4096 Apr 30 22:33 pilot3
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc 197643702 May  1 02:42 HITS.49645815._023854.pool.root.1
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc       489 May  1 02:42 boinc_task_state.xml
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc      1034 May  1 02:43 memory_monitor_summary.json
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc   1510091 May  1 02:43 agis_ddmendpoints.agis.ALL.json
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc    330793 May  1 02:43 log.49645815._023854.job.log.tgz.1
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc      6422 May  1 02:43 heartbeat_new.json
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc      6313 May  1 02:43 heartbeat.json
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc        95 May  1 02:43 pilot_heartbeat.json
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc      8192 May  1 02:44 boinc_mmap_file
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc        28 May  1 02:44 wrapper_checkpoint.txt
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc      4832 May  1 02:44 pilotlog.txt
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc   1392670 May  1 02:44 log.49645815._023854.job.log.1
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc       357 May  1 02:44 output.list
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc       410 May  1 02:44 runtime_log
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc   1740800 May  1 02:44 result.tar.gz
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc      8828 May  1 02:44 runtime_log.err
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc       665 May  1 02:44 5f7a20011dba.diag
[2026-05-01 02:44:19] -rw-r--r--. 1 boinc boinc     21111 May  1 02:44 stderr.txt
[2026-05-01 02:44:19] HITS file was successfully produced:
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc 197643702 May  1 02:42 shared/HITS.pool.root.1
[2026-05-01 02:44:19]  *** Contents of shared directory: ***
[2026-05-01 02:44:19] total 413480
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc 223291546 Apr 30 22:33 ATLAS.root_0
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:33 start_atlas.sh
[2026-05-01 02:44:19] -rw-r--r--. 2 boinc boinc    697439 Apr 30 22:33 input.tar.gz
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc 197643702 May  1 02:42 HITS.pool.root.1
[2026-05-01 02:44:19] -rw-------. 1 boinc boinc   1740800 May  1 02:44 result.tar.gz
02:44:21 (4128042): run_atlas exited; CPU time 57472.773113
02:44:21 (4128042): called boinc_finish(0)

</stderr_txt>
]]>

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