Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:41 (19036): wrapper (7.7.26015): starting
00:45:41 (19036): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 00:45:41] Arguments: --nthreads 8
[2026-04-30 00:45:41] Threads: 8
[2026-04-30 00:45:41] Checking for CVMFS
[2026-04-30 00:45:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 00:45:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 00:45:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 00:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 00:45:46] 2.11.2.0 8583 20502 99740 159023 1 119 18280306 25165824 540 130560 0 7887589 99.910 2437096 3148 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 00:45:46] CVMFS is ok
[2026-04-30 00:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 00:45:46] Checking for apptainer binary...
[2026-04-30 00:45:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 00:45:46] Running /usr/bin/apptainer --version
[2026-04-30 00:45:47] apptainer version 1.3.2-1.el7
[2026-04-30 00:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 00:46:09] cg-vwn390.simple-grid.lan
[2026-04-30 00:46:09] apptainer works
[2026-04-30 00:46:09] Set ATHENA_PROC_NUMBER=8
[2026-04-30 00:46:09] Set ATHENA_CORE_NUMBER=8
[2026-04-30 00:46:09] Starting ATLAS job with PandaID=7119451931
[2026-04-30 00:46:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 04:24:21]  *** The last 200 lines of the pilot log: ***
[2026-04-30 04:24:21] 2026-04-30 02:23:33,551 | INFO     | this job has now completed (state=finished)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,552 | INFO     | log transfer has been attempted: DONE
[2026-04-30 04:24:21] 2026-04-30 02:23:33,552 | INFO     | job 7119451931 has finished - writing final server update
[2026-04-30 04:24:21] 2026-04-30 02:23:33,552 | INFO     | total number of processed events: 400 (read)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,554 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7119451931/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,555 | INFO     | extracted standard info from prmon json
[2026-04-30 04:24:21] 2026-04-30 02:23:33,555 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 04:24:21] 2026-04-30 02:23:33,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 04:24:21] 2026-04-30 02:23:33,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 04:24:21] 2026-04-30 02:23:33,560 | INFO     | fitting pss+swap vs Time
[2026-04-30 04:24:21] 2026-04-30 02:23:33,560 | INFO     | sum of square deviations: 2830787960.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,562 | INFO     | sum of deviations: 9110097460.000004
[2026-04-30 04:24:21] 2026-04-30 02:23:33,562 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,562 | INFO     | mean y: 2513056.6650717705
[2026-04-30 04:24:21] 2026-04-30 02:23:33,562 | INFO     | intersect: 2513056.6650717705
[2026-04-30 04:24:21] 2026-04-30 02:23:33,563 | INFO     | chi2: 2.3828397907490944
[2026-04-30 04:24:21] 2026-04-30 02:23:33,563 | INFO     | sum of square deviations: 2632440055.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,565 | INFO     | sum of deviations: 22727867085.000004
[2026-04-30 04:24:21] 2026-04-30 02:23:33,565 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,565 | INFO     | mean y: 2523317.598039216
[2026-04-30 04:24:21] 2026-04-30 02:23:33,565 | INFO     | intersect: 2523317.598039216
[2026-04-30 04:24:21] 2026-04-30 02:23:33,566 | INFO     | chi2: 1.6133165966139755
[2026-04-30 04:24:21] 2026-04-30 02:23:33,566 | INFO     | current chi2=1.6133165966139755 (change=32.29437401216149 %)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,566 | INFO     | sum of square deviations: 2443580700.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | sum of deviations: 22060072634.999996
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | mean y: 2522778.2211055276
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | intersect: 2522778.2211055276
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | chi2: 1.6144522140550353
[2026-04-30 04:24:21] 2026-04-30 02:23:33,568 | INFO     | current chi2=1.6144522140550353 (change=-0.0703902410378194 %)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,569 | INFO     | right removable region: 198
[2026-04-30 04:24:21] 2026-04-30 02:23:33,569 | INFO     | sum of square deviations: 2632440055.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,570 | INFO     | sum of deviations: -23335643238.500008
[2026-04-30 04:24:21] 2026-04-30 02:23:33,571 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,571 | INFO     | mean y: 2537731.8284313725
[2026-04-30 04:24:21] 2026-04-30 02:23:33,571 | INFO     | intersect: 2537731.8284313725
[2026-04-30 04:24:21] 2026-04-30 02:23:33,571 | INFO     | chi2: 0.9168357964667357
[2026-04-30 04:24:21] 2026-04-30 02:23:33,571 | INFO     | current chi2=0.9168357964667357 (change=61.52339741739373 %)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,572 | INFO     | sum of square deviations: 2443580700.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,573 | INFO     | sum of deviations: -23397909263.000004
[2026-04-30 04:24:21] 2026-04-30 02:23:33,573 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,574 | INFO     | mean y: 2537737.1256281408
[2026-04-30 04:24:21] 2026-04-30 02:23:33,574 | INFO     | intersect: 2537737.1256281408
[2026-04-30 04:24:21] 2026-04-30 02:23:33,574 | INFO     | chi2: 0.8993913698676343
[2026-04-30 04:24:21] 2026-04-30 02:23:33,574 | INFO     | current chi2=0.8993913698676343 (change=1.9026773023400712 %)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,574 | INFO     | left removable region: 10
[2026-04-30 04:24:21] 2026-04-30 02:23:33,575 | INFO     | sum of square deviations: 2060343747.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,576 | INFO     | sum of deviations: -9515285812.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,576 | INFO     | mean x (centered): 0.0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,576 | INFO     | mean y: 2549301.7021276597
[2026-04-30 04:24:21] 2026-04-30 02:23:33,577 | INFO     | intersect: 2549301.7021276597
[2026-04-30 04:24:21] 2026-04-30 02:23:33,577 | INFO     | chi2: 0.10686869741184907
[2026-04-30 04:24:21] 2026-04-30 02:23:33,577 | INFO     | current memory leak: -4.62 B/s (using 188 data points, chi2=0.11)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,578 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,578 | INFO     | ..............................
[2026-04-30 04:24:21] 2026-04-30 02:23:33,578 | INFO     | . Timing measurements:
[2026-04-30 04:24:21] 2026-04-30 02:23:33,578 | INFO     | . get job = 0 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,578 | INFO     | . initial setup = 24 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | . payload setup = 13 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | . stage-in = 0 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | . payload execution = 12726 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | . stage-out = 1 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | . log creation = 0 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,579 | INFO     | ..............................
[2026-04-30 04:24:21] 2026-04-30 02:23:33,691 | INFO     | 
[2026-04-30 04:24:21] 2026-04-30 02:23:33,691 | INFO     | job summary report
[2026-04-30 04:24:21] 2026-04-30 02:23:33,691 | INFO     | --------------------------------------------------
[2026-04-30 04:24:21] 2026-04-30 02:23:33,691 | INFO     | PanDA job id: 7119451931
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | task id: 49863714
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | errors: (none)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | pilot state: finished 
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | transexitcode: 0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | exeerrorcode: 0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | exeerrordiag: 
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | exitcode: 0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | exitmsg: OK
[2026-04-30 04:24:21] 2026-04-30 02:23:33,692 | INFO     | cpuconsumptiontime: 86271 s
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | nevents: 400
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | neventsw: 0
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | pid: 27809
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | pgrp: 27809
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | corecount: 8
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | event service: False
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | sizes: {0: 2279956, 1: 2282442, 12: 2282442, 12743: 2312540, 12744: 2312539, 12745: 2321593, 12747: 2321777, 12749: 2321971}
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | --------------------------------------------------
[2026-04-30 04:24:21] 2026-04-30 02:23:33,693 | INFO     | 
[2026-04-30 04:24:21] 2026-04-30 02:23:33,694 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-30 04:24:21] 2026-04-30 02:23:33,733 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,736 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 04:24:21] 2026-04-30 02:23:33,736 | INFO     | job 7119451931 has completed (purged errors)
[2026-04-30 04:24:21] 2026-04-30 02:23:33,736 | INFO     | overall cleanup function is called
[2026-04-30 04:24:21] 2026-04-30 02:23:34,743 | INFO     | --- collectZombieJob: --- 10, [27809]
[2026-04-30 04:24:21] 2026-04-30 02:23:34,744 | INFO     | zombie collector waiting for pid 27809
[2026-04-30 04:24:21] 2026-04-30 02:23:34,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 04:24:21] 2026-04-30 02:23:34,744 | INFO     | collected zombie processes
[2026-04-30 04:24:21] 2026-04-30 02:23:34,744 | INFO     | will attempt to kill all subprocesses of pid=27809
[2026-04-30 04:24:21] 2026-04-30 02:23:34,798 | INFO     | process IDs to be killed: [27809] (in reverse order)
[2026-04-30 04:24:21] 2026-04-30 02:23:34,877 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 04:24:21] 2026-04-30 02:23:34,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 04:24:21] 2026-04-30 02:23:34,880 | INFO     | did not find any defunct processes belonging to 27809
[2026-04-30 04:24:21] 2026-04-30 02:23:34,881 | INFO     | did not find any defunct processes belonging to 27809
[2026-04-30 04:24:21] 2026-04-30 02:23:34,882 | INFO     | Ready for new job
[2026-04-30 04:24:21] 2026-04-30 02:23:34,883 | INFO     | ***************************************
[2026-04-30 04:24:21] 2026-04-30 02:23:34,883 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 04:24:21] 2026-04-30 02:23:34,884 | INFO     | ***************************************
[2026-04-30 04:24:21] 2026-04-30 02:23:34,884 | INFO     | 
[2026-04-30 04:24:21] 2026-04-30 02:23:34,884 | INFO     | pilot is running in a VM
[2026-04-30 04:24:21] 2026-04-30 02:23:34,884 | INFO     | architecture information:
[2026-04-30 04:24:21] 2026-04-30 02:23:34,885 | INFO     | executing command: cat /etc/os-release
[2026-04-30 04:24:21] 2026-04-30 02:23:34,920 | INFO     | cat /etc/os-release:
[2026-04-30 04:24:21] NAME="CentOS Linux"
[2026-04-30 04:24:21] VERSION="7 (Core)"
[2026-04-30 04:24:21] ID="centos"
[2026-04-30 04:24:21] ID_LIKE="rhel fedora"
[2026-04-30 04:24:21] VERSION_ID="7"
[2026-04-30 04:24:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 04:24:21] ANSI_COLOR="0;31"
[2026-04-30 04:24:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 04:24:21] HOME_URL="https://www.centos.org/"
[2026-04-30 04:24:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 04:24:21] 
[2026-04-30 04:24:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 04:24:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 04:24:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 04:24:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 04:24:21] 
[2026-04-30 04:24:21] 2026-04-30 02:23:34,920 | INFO     | ***************************************
[2026-04-30 04:24:21] 2026-04-30 02:23:35,423 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-30 04:24:21] 2026-04-30 02:23:35,447 | INFO     | sufficient remaining disk space (497734909952 B)
[2026-04-30 04:24:21] 2026-04-30 02:23:35,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 04:24:21] 2026-04-30 02:23:35,448 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 04:24:21] 2026-04-30 02:23:35,448 | INFO     | update_server=False
[2026-04-30 04:24:21] 2026-04-30 02:23:35,448 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 04:24:21] 2026-04-30 02:23:35,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 04:24:21] 2026-04-30 02:23:35,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 04:24:21] 2026-04-30 02:23:35,449 | INFO     | aborting loop
[2026-04-30 04:24:21] 2026-04-30 02:23:35,856 | INFO     | all data control threads have been joined
[2026-04-30 04:24:21] 2026-04-30 02:23:35,860 | INFO     | all job control threads have been joined
[2026-04-30 04:24:21] 2026-04-30 02:23:35,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 04:24:21] 2026-04-30 02:23:36,263 | INFO     | all payload control threads have been joined
[2026-04-30 04:24:21] 2026-04-30 02:23:36,454 | INFO     | [job] retrieve thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:36,454 | INFO     | [job] queue monitor thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:36,455 | INFO     | [job] job monitor thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:36,730 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:36,861 | INFO     | [data] control thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:36,865 | INFO     | [job] control thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,044 | INFO     | [data] copytool_in thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,268 | INFO     | [payload] control thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,380 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,447 | INFO     | [payload] failed_post thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,461 | INFO     | [job] validate thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,479 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,790 | INFO     | [payload] validate_post thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:37,875 | INFO     | [data] copytool_out thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:23:38,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 04:24:21] 2026-04-30 02:23:42,380 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 04:24:21] 2026-04-30 02:24:05,648 | INFO     | PID=23369 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 04:24:21] 2026-04-30 02:24:05,648 | INFO     | .. there are 2 such processes running
[2026-04-30 04:24:21] 2026-04-30 02:24:05,650 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 04:24:21] 2026-04-30 02:24:05,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 04:24:21] 2026-04-30 02:24:05,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 04:24:21] 2026-04-30 02:24:14,364 | INFO     | [monitor] cgroup control has ended
[2026-04-30 04:24:21] 2026-04-30 02:24:16,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235315971904)>', '<ExcThread(monitor, started 140234280912640)>']
[2026-04-30 04:24:21] 2026-04-30 02:24:16,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 04:24:21] 2026-04-30 02:24:16,704 | INFO     | [monitor] control thread has ended
[2026-04-30 04:24:21] 2026-04-30 02:24:21,175 | INFO     | all workflow threads have been joined
[2026-04-30 04:24:21] 2026-04-30 02:24:21,176 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 04:24:21] 2026-04-30 02:24:21,176 | INFO     | traces error code: 0
[2026-04-30 04:24:21] 2026-04-30 02:24:21,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 04:24:21] 2026-04-30 02:24:21,325 [wrapper] ==== pilot stdout END ====
[2026-04-30 04:24:21] 2026-04-30 02:24:21,328 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 04:24:21] 2026-04-30 02:24:21,331 [wrapper] pilotpid: 23369
[2026-04-30 04:24:21] 2026-04-30 02:24:21,335 [wrapper] Pilot exit status: 0
[2026-04-30 04:24:21] 2026-04-30 02:24:21,354 [wrapper] pandaids: 7119451931
[2026-04-30 04:24:21] 2026-04-30 02:24:21,389 [wrapper] cleanup supervisor_pilot  5050 23370
[2026-04-30 04:24:21] 2026-04-30 02:24:21,394 [wrapper] Test setup, not cleaning
[2026-04-30 04:24:21] 2026-04-30 02:24:21,405 [wrapper] apfmon messages muted
[2026-04-30 04:24:21] 2026-04-30 02:24:21,409 [wrapper] ==== wrapper stdout END ====
[2026-04-30 04:24:21] 2026-04-30 02:24:21,412 [wrapper] ==== wrapper stderr END ====
[2026-04-30 04:24:21]  *** Error codes and diagnostics ***
[2026-04-30 04:24:21]     "exeErrorCode": 0,
[2026-04-30 04:24:21]     "pilotErrorCode": 0,
[2026-04-30 04:24:21]  *** Listing of results directory ***
[2026-04-30 04:24:21] total 482892
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc    683926 Apr 29 21:17 pilot3.tar.gz
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc      5631 Apr 29 21:39 queuedata.json
[2026-04-30 04:24:21] -rwx------. 1 boinc boinc     36322 Apr 29 21:40 runpilot2-wrapper.sh
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc       100 Apr 30 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 04:24:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 00:45 run_atlas
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc       105 Apr 30 00:45 job.xml
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc 264504111 Apr 30 00:45 EVNT.49863712._000156.pool.root.1
[2026-04-30 04:24:21] drwxrwx--x. 2 boinc boinc        68 Apr 30 00:45 shared
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc    697421 Apr 30 00:45 input.tar.gz
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc      6307 Apr 30 00:45 init_data.xml
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc     15667 Apr 30 00:45 start_atlas.sh
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc         0 Apr 30 00:45 boinc_lockfile
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc      2575 Apr 30 00:46 pandaJob.out
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc   1001901 Apr 30 00:50 agis_schedconf.cvmfs.json
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc       415 Apr 30 00:50 workernode_map.json
[2026-04-30 04:24:21] drwx------. 5 boinc boinc      4096 Apr 30 00:50 pilot3
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc 222709692 Apr 30 04:22 HITS.49863714._005106.pool.root.1
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc       489 Apr 30 04:23 boinc_task_state.xml
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc      1025 Apr 30 04:23 memory_monitor_summary.json
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc   1512704 Apr 30 04:23 agis_ddmendpoints.agis.ALL.json
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc    369133 Apr 30 04:23 log.49863714._005106.job.log.tgz.1
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc      6329 Apr 30 04:23 heartbeat_new.json
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc      6220 Apr 30 04:23 heartbeat.json
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc      8192 Apr 30 04:23 boinc_mmap_file
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc        28 Apr 30 04:23 wrapper_checkpoint.txt
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc        95 Apr 30 04:24 pilot_heartbeat.json
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc      4883 Apr 30 04:24 pilotlog.txt
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc   1198475 Apr 30 04:24 log.49863714._005106.job.log.1
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc       357 Apr 30 04:24 output.list
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc       410 Apr 30 04:24 runtime_log
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc   1587200 Apr 30 04:24 result.tar.gz
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc      8439 Apr 30 04:24 runtime_log.err
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc       655 Apr 30 04:24 5e9d943438a6.diag
[2026-04-30 04:24:21] -rw-r--r--. 1 boinc boinc     20657 Apr 30 04:24 stderr.txt
[2026-04-30 04:24:21] HITS file was successfully produced:
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc 222709692 Apr 30 04:22 shared/HITS.pool.root.1
[2026-04-30 04:24:21]  *** Contents of shared directory: ***
[2026-04-30 04:24:21] total 478052
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc 264504111 Apr 30 00:45 ATLAS.root_0
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc    697421 Apr 30 00:45 input.tar.gz
[2026-04-30 04:24:21] -rw-r--r--. 2 boinc boinc     15667 Apr 30 00:45 start_atlas.sh
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc 222709692 Apr 30 04:22 HITS.pool.root.1
[2026-04-30 04:24:21] -rw-------. 1 boinc boinc   1587200 Apr 30 04:24 result.tar.gz
04:24:23 (19036): run_atlas exited; CPU time 86377.256973
04:24:23 (19036): called boinc_finish(0)

</stderr_txt>
]]>

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