Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:04:30 (1327123): wrapper (7.7.26015): starting
00:04:30 (1327123): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 00:04:30] Arguments: --nthreads 4
[2026-05-01 00:04:30] Threads: 4
[2026-05-01 00:04:30] Checking for CVMFS
[2026-05-01 00:04:30] No cvmfs_config command found, will try listing directly
[2026-05-01 00:04:30] CVMFS is ok
[2026-05-01 00:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 00:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 00:04:30] Further information can be found at the LHC@home message board.
[2026-05-01 00:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 00:04:30] Checking for apptainer binary...
[2026-05-01 00:04:30] which: no apptainer in ((null))
[2026-05-01 00:04:30] apptainer is not installed, using version from CVMFS
[2026-05-01 00:04:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 00:04:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-01 00:04:30] apptainer works
[2026-05-01 00:04:30] Set ATHENA_PROC_NUMBER=4
[2026-05-01 00:04:30] Set ATHENA_CORE_NUMBER=4
[2026-05-01 00:04:30] Starting ATLAS job with PandaID=7118440065
[2026-05-01 00:04:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 04:47:21]  *** The last 200 lines of the pilot log: ***
[2026-05-01 04:47:21] 2026-05-01 02:46:36,102 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,102 | INFO     | mean y: 2331938.9779411764
[2026-05-01 04:47:21] 2026-05-01 02:46:36,102 | INFO     | intersect: 2331938.9779411764
[2026-05-01 04:47:21] 2026-05-01 02:46:36,102 | INFO     | chi2: 1.3855397942235528
[2026-05-01 04:47:21] 2026-05-01 02:46:36,102 | INFO     | current chi2=1.3855397942235528 (change=-0.023530661384628556 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,103 | INFO     | right removable region: 271
[2026-05-01 04:47:21] 2026-05-01 02:46:36,103 | INFO     | sum of square deviations: 6239923508.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,105 | INFO     | sum of deviations: 8929575402.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,105 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,105 | INFO     | mean y: 2349092.330882353
[2026-05-01 04:47:21] 2026-05-01 02:46:36,105 | INFO     | intersect: 2349092.330882353
[2026-05-01 04:47:21] 2026-05-01 02:46:36,106 | INFO     | chi2: 0.008275327577682769
[2026-05-01 04:47:21] 2026-05-01 02:46:36,106 | INFO     | current chi2=0.008275327577682769 (change=99.40259566332902 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,106 | INFO     | sum of square deviations: 5902093918.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,108 | INFO     | sum of deviations: 8831340270.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,108 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,108 | INFO     | mean y: 2349123.981273408
[2026-05-01 04:47:21] 2026-05-01 02:46:36,108 | INFO     | intersect: 2349123.981273408
[2026-05-01 04:47:21] 2026-05-01 02:46:36,109 | INFO     | chi2: 0.0035467046787204114
[2026-05-01 04:47:21] 2026-05-01 02:46:36,109 | INFO     | current chi2=0.0035467046787204114 (change=57.141217124923195 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,109 | INFO     | sum of square deviations: 5576683165.5
[2026-05-01 04:47:21] 2026-05-01 02:46:36,111 | INFO     | sum of deviations: 6745584899.000002
[2026-05-01 04:47:21] 2026-05-01 02:46:36,111 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,111 | INFO     | mean y: 2350100.4580152673
[2026-05-01 04:47:21] 2026-05-01 02:46:36,111 | INFO     | intersect: 2350100.4580152673
[2026-05-01 04:47:21] 2026-05-01 02:46:36,112 | INFO     | chi2: 0.001997968667595069
[2026-05-01 04:47:21] 2026-05-01 02:46:36,112 | INFO     | current chi2=0.001997968667595069 (change=43.666900726679586 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,112 | INFO     | sum of square deviations: 5263458688.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,114 | INFO     | sum of deviations: 5026683528.000001
[2026-05-01 04:47:21] 2026-05-01 02:46:36,114 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,114 | INFO     | mean y: 2350937.291828794
[2026-05-01 04:47:21] 2026-05-01 02:46:36,114 | INFO     | intersect: 2350937.291828794
[2026-05-01 04:47:21] 2026-05-01 02:46:36,115 | INFO     | chi2: 0.0008876079560901075
[2026-05-01 04:47:21] 2026-05-01 02:46:36,115 | INFO     | current chi2=0.0008876079560901075 (change=55.574480697011595 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,115 | INFO     | sum of square deviations: 4962187923.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,117 | INFO     | sum of deviations: 4268385269.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,117 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,117 | INFO     | mean y: 2351320.984126984
[2026-05-01 04:47:21] 2026-05-01 02:46:36,117 | INFO     | intersect: 2351320.984126984
[2026-05-01 04:47:21] 2026-05-01 02:46:36,118 | INFO     | chi2: 0.0007446698240797811
[2026-05-01 04:47:21] 2026-05-01 02:46:36,118 | INFO     | current chi2=0.0007446698240797811 (change=16.103746144859446 %)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,118 | INFO     | left removable region: 25
[2026-05-01 04:47:21] 2026-05-01 02:46:36,118 | INFO     | sum of square deviations: 4616114457.5
[2026-05-01 04:47:21] 2026-05-01 02:46:36,120 | INFO     | sum of deviations: 3862639926.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,120 | INFO     | mean x (centered): 0.0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,120 | INFO     | mean y: 2351106.3902439023
[2026-05-01 04:47:21] 2026-05-01 02:46:36,120 | INFO     | intersect: 2351106.3902439023
[2026-05-01 04:47:21] 2026-05-01 02:46:36,120 | INFO     | chi2: 0.0007381642254442924
[2026-05-01 04:47:21] 2026-05-01 02:46:36,121 | INFO     | current memory leak: 0.84 B/s (using 246 data points, chi2=0.00)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,121 | INFO     | could have reported an average CPU frequency of 2502 MHz (13 samples)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,121 | INFO     | ..............................
[2026-05-01 04:47:21] 2026-05-01 02:46:36,121 | INFO     | . Timing measurements:
[2026-05-01 04:47:21] 2026-05-01 02:46:36,121 | INFO     | . get job = 0 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . initial setup = 5 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . payload setup = 10 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . stage-in = 0 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . payload execution = 16879 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . stage-out = 1 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | . log creation = 0 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,122 | INFO     | ..............................
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | 
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | job summary report
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | --------------------------------------------------
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | PanDA job id: 7118440065
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | task id: 49863869
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | errors: (none)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 04:47:21] 2026-05-01 02:46:36,211 | INFO     | pilot state: finished 
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | transexitcode: 0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | exeerrorcode: 0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | exeerrordiag: 
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | exitcode: 0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | exitmsg: OK
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | cpuconsumptiontime: 63201 s
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | nevents: 400
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | neventsw: 0
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | pid: 1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | pgrp: 1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | corecount: 4
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | event service: False
[2026-05-01 04:47:21] 2026-05-01 02:46:36,212 | INFO     | sizes: {0: 2276543, 1: 2278372, 12: 2278372, 16893: 2310130, 16895: 2319206, 16896: 2319344}
[2026-05-01 04:47:21] 2026-05-01 02:46:36,213 | INFO     | --------------------------------------------------
[2026-05-01 04:47:21] 2026-05-01 02:46:36,213 | INFO     | 
[2026-05-01 04:47:21] 2026-05-01 02:46:36,213 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/1
[2026-05-01 04:47:21] 2026-05-01 02:46:36,238 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,240 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 04:47:21] 2026-05-01 02:46:36,241 | INFO     | job 7118440065 has completed (purged errors)
[2026-05-01 04:47:21] 2026-05-01 02:46:36,241 | INFO     | overall cleanup function is called
[2026-05-01 04:47:21] 2026-05-01 02:46:37,248 | INFO     | --- collectZombieJob: --- 10, [1336290]
[2026-05-01 04:47:21] 2026-05-01 02:46:37,248 | INFO     | zombie collector waiting for pid 1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:37,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 04:47:21] 2026-05-01 02:46:37,248 | INFO     | collected zombie processes
[2026-05-01 04:47:21] 2026-05-01 02:46:37,249 | INFO     | will attempt to kill all subprocesses of pid=1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:37,558 | INFO     | process IDs to be killed: [1336290] (in reverse order)
[2026-05-01 04:47:21] 2026-05-01 02:46:37,701 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 04:47:21] 2026-05-01 02:46:37,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 04:47:21] 2026-05-01 02:46:37,717 | INFO     | did not find any defunct processes belonging to 1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:37,731 | INFO     | did not find any defunct processes belonging to 1336290
[2026-05-01 04:47:21] 2026-05-01 02:46:37,731 | INFO     | Ready for new job
[2026-05-01 04:47:21] 2026-05-01 02:46:37,734 | INFO     | ***************************************
[2026-05-01 04:47:21] 2026-05-01 02:46:37,734 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 04:47:21] 2026-05-01 02:46:37,734 | INFO     | ***************************************
[2026-05-01 04:47:21] 2026-05-01 02:46:37,734 | INFO     | 
[2026-05-01 04:47:21] 2026-05-01 02:46:37,738 | INFO     | architecture information:
[2026-05-01 04:47:21] 2026-05-01 02:46:37,738 | INFO     | executing command: cat /etc/os-release
[2026-05-01 04:47:21] 2026-05-01 02:46:37,756 | INFO     | cat /etc/os-release:
[2026-05-01 04:47:21] NAME="CentOS Linux"
[2026-05-01 04:47:21] VERSION="7 (Core)"
[2026-05-01 04:47:21] ID="centos"
[2026-05-01 04:47:21] ID_LIKE="rhel fedora"
[2026-05-01 04:47:21] VERSION_ID="7"
[2026-05-01 04:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 04:47:21] ANSI_COLOR="0;31"
[2026-05-01 04:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 04:47:21] HOME_URL="https://www.centos.org/"
[2026-05-01 04:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 04:47:21] 
[2026-05-01 04:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 04:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 04:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 04:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 04:47:21] 
[2026-05-01 04:47:21] 2026-05-01 02:46:37,756 | INFO     | ***************************************
[2026-05-01 04:47:21] 2026-05-01 02:46:38,258 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/1
[2026-05-01 04:47:21] 2026-05-01 02:46:38,280 | INFO     | sufficient remaining disk space (27865907200 B)
[2026-05-01 04:47:21] 2026-05-01 02:46:38,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 04:47:21] 2026-05-01 02:46:38,281 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 04:47:21] 2026-05-01 02:46:38,281 | INFO     | update_server=False
[2026-05-01 04:47:21] 2026-05-01 02:46:38,281 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 04:47:21] 2026-05-01 02:46:38,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 04:47:21] 2026-05-01 02:46:38,295 | INFO     | all data control threads have been joined
[2026-05-01 04:47:21] 2026-05-01 02:46:39,000 | WARNING  | process 1336290 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 04:47:21] 2026-05-01 02:46:39,199 | INFO     | all job control threads have been joined
[2026-05-01 04:47:21] 2026-05-01 02:46:39,259 | INFO     | using path: /var/lib/boinc/var/slot40/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 04:47:21] 2026-05-01 02:46:39,286 | INFO     | [job] retrieve thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,300 | INFO     | [data] control thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,351 | INFO     | [payload] validate_post thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,565 | INFO     | number of running child processes to parent process 1336290: 1
[2026-05-01 04:47:21] 2026-05-01 02:46:39,565 | INFO     | maximum number of monitored processes: 6
[2026-05-01 04:47:21] 2026-05-01 02:46:39,565 | INFO     | aborting job monitoring since job object (job id=7118440065) has expired
[2026-05-01 04:47:21] 2026-05-01 02:46:39,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 04:47:21] 2026-05-01 02:46:39,565 | INFO     | will abort loop
[2026-05-01 04:47:21] 2026-05-01 02:46:39,603 | INFO     | [data] copytool_in thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,634 | INFO     | [payload] failed_post thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,698 | INFO     | all payload control threads have been joined
[2026-05-01 04:47:21] 2026-05-01 02:46:39,751 | INFO     | [job] validate thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,758 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:39,895 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:40,204 | INFO     | [job] control thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:40,286 | INFO     | [data] copytool_out thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:40,570 | INFO     | [job] job monitor thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:40,692 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:40,703 | INFO     | [payload] control thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:41,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 04:47:21] 2026-05-01 02:46:41,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 04:47:21] 2026-05-01 02:46:42,227 | INFO     | [job] queue monitor thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:45,511 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:46:49,219 | INFO     | job.realtimelogging is not enabled
[2026-05-01 04:47:21] 2026-05-01 02:46:50,224 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 04:47:21] 2026-05-01 02:47:08,272 | INFO     | PID=1331218 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 04:47:21] 2026-05-01 02:47:08,272 | INFO     | .. there are 14 such processes running
[2026-05-01 04:47:21] 2026-05-01 02:47:08,273 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 04:47:21] 2026-05-01 02:47:08,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 04:47:21] 2026-05-01 02:47:08,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 04:47:21] 2026-05-01 02:47:16,185 | INFO     | [monitor] cgroup control has ended
[2026-05-01 04:47:21] 2026-05-01 02:47:16,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22458252470080)>', '<ExcThread(monitor, started 22458016216832)>']
[2026-05-01 04:47:21] 2026-05-01 02:47:17,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 04:47:21] 2026-05-01 02:47:17,320 | INFO     | [monitor] control thread has ended
[2026-05-01 04:47:21] 2026-05-01 02:47:21,592 | INFO     | all workflow threads have been joined
[2026-05-01 04:47:21] 2026-05-01 02:47:21,592 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 04:47:21] 2026-05-01 02:47:21,593 | INFO     | traces error code: 0
[2026-05-01 04:47:21] 2026-05-01 02:47:21,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 04:47:21] 2026-05-01 02:47:21,735 [wrapper] ==== pilot stdout END ====
[2026-05-01 04:47:21] 2026-05-01 02:47:21,737 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 04:47:21] 2026-05-01 02:47:21,740 [wrapper] pilotpid: 1331218
[2026-05-01 04:47:21] 2026-05-01 02:47:21,744 [wrapper] Pilot exit status: 0
[2026-05-01 04:47:21] 2026-05-01 02:47:21,756 [wrapper] pandaids: 7118440065
[2026-05-01 04:47:21] 2026-05-01 02:47:21,826 [wrapper] cleanup supervisor_pilot 1652156 1331219
[2026-05-01 04:47:21] 2026-05-01 02:47:21,828 [wrapper] Test setup, not cleaning
[2026-05-01 04:47:21] 2026-05-01 02:47:21,831 [wrapper] apfmon messages muted
[2026-05-01 04:47:21] 2026-05-01 02:47:21,834 [wrapper] ==== wrapper stdout END ====
[2026-05-01 04:47:21] 2026-05-01 02:47:21,836 [wrapper] ==== wrapper stderr END ====
[2026-05-01 04:47:21]  *** Error codes and diagnostics ***
[2026-05-01 04:47:21]     "exeErrorCode": 0,
[2026-05-01 04:47:21]     "pilotErrorCode": 0,
[2026-05-01 04:47:21]  *** Listing of results directory ***
[2026-05-01 04:47:21] total 470708
[2026-05-01 04:47:21] -rwx------. 1 boinc boinc     36322 Apr 29 10:21 runpilot2-wrapper.sh
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc    683926 Apr 29 21:17 pilot3.tar.gz
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc      5631 Apr 29 21:39 queuedata.json
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc       100 May  1 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 04:47:21] -rwxr-xr-x. 1 boinc boinc      7986 May  1 00:04 run_atlas
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc       105 May  1 00:04 job.xml
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc      6482 May  1 00:04 init_data.xml
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc 261097133 May  1 00:04 EVNT.49863867._000099.pool.root.1
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc     15667 May  1 00:04 start_atlas.sh
[2026-05-01 04:47:21] drwxrwx--x. 2 boinc boinc      4096 May  1 00:04 shared
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc    697416 May  1 00:04 input.tar.gz
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc         0 May  1 00:04 boinc_lockfile
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc      2574 May  1 00:04 pandaJob.out
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc    997566 May  1 00:04 agis_schedconf.cvmfs.json
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc       452 May  1 00:04 workernode_map.json
[2026-05-01 04:47:21] drwx------. 5 boinc boinc      4096 May  1 00:04 pilot3
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc 212931527 May  1 04:45 HITS.49863869._002468.pool.root.1
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc       488 May  1 04:46 boinc_task_state.xml
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc      1034 May  1 04:46 memory_monitor_summary.json
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc   1510091 May  1 04:46 agis_ddmendpoints.agis.ALL.json
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc    352501 May  1 04:46 log.49863869._002468.job.log.tgz.1
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc      6435 May  1 04:46 heartbeat_new.json
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc      6326 May  1 04:46 heartbeat.json
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc        95 May  1 04:47 pilot_heartbeat.json
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc      8192 May  1 04:47 boinc_mmap_file
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc        28 May  1 04:47 wrapper_checkpoint.txt
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc      5436 May  1 04:47 pilotlog.txt
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc   1565973 May  1 04:47 log.49863869._002468.job.log.1
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc       357 May  1 04:47 output.list
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc       410 May  1 04:47 runtime_log
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc   1935360 May  1 04:47 result.tar.gz
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc      8828 May  1 04:47 runtime_log.err
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc       665 May  1 04:47 bf84170be8fd.diag
[2026-05-01 04:47:21] -rw-r--r--. 1 boinc boinc     20750 May  1 04:47 stderr.txt
[2026-05-01 04:47:21] HITS file was successfully produced:
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc 212931527 May  1 04:45 shared/HITS.pool.root.1
[2026-05-01 04:47:21]  *** Contents of shared directory: ***
[2026-05-01 04:47:21] total 465524
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc 261097133 May  1 00:04 ATLAS.root_0
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc     15667 May  1 00:04 start_atlas.sh
[2026-05-01 04:47:21] -rw-r--r--. 2 boinc boinc    697416 May  1 00:04 input.tar.gz
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc 212931527 May  1 04:45 HITS.pool.root.1
[2026-05-01 04:47:21] -rw-------. 1 boinc boinc   1935360 May  1 04:47 result.tar.gz
04:47:23 (1327123): run_atlas exited; CPU time 63813.668669
04:47:23 (1327123): called boinc_finish(0)

</stderr_txt>
]]>

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