Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-30 06:52:36 (14404): vboxwrapper version 26210
2026-04-30 06:52:36 (14404): BOINC client version: 8.2.9
2026-04-30 06:52:37 (14404): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-04-30 06:52:37 (14404): Successfully copied 'init_data.xml' to the shared directory.
2026-04-30 06:52:37 (14404): Create VM. (boinc_9f5dbda302b39696, slot#12)
2026-04-30 06:52:38 (14404): Setting Memory Size for VM. (4400MB)
2026-04-30 06:52:38 (14404): Setting CPU Count for VM. (4)
2026-04-30 06:52:38 (14404): Setting Chipset Options for VM.
2026-04-30 06:52:39 (14404): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-30 06:52:39 (14404): Setting Boot Options for VM.
2026-04-30 06:52:39 (14404): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-30 06:52:40 (14404): Enabling VM Network Access.
2026-04-30 06:52:40 (14404): Disabling USB Support for VM.
2026-04-30 06:52:40 (14404): Disabling COM Port Support for VM.
2026-04-30 06:52:40 (14404): Disabling LPT Port Support for VM.
2026-04-30 06:52:41 (14404): Disabling Audio Support for VM.
2026-04-30 06:52:41 (14404): Disabling Clipboard Support for VM.
2026-04-30 06:52:41 (14404): Disabling Drag and Drop Support for VM.
2026-04-30 06:52:41 (14404): Adding storage controller(s) to VM.
2026-04-30 06:52:42 (14404): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-30 06:52:42 (14404): Adding VirtualBox Guest Additions to VM.
2026-04-30 06:52:43 (14404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-30 06:52:43 (14404): forwarding host port 56574 to guest port 80
2026-04-30 06:52:43 (14404): Enabling remote desktop for VM.
2026-04-30 06:52:43 (14404): Required extension pack not installed, remote desktop not enabled.
2026-04-30 06:52:43 (14404): Enabling shared directory for VM.
2026-04-30 06:52:44 (14404): Starting VM using VBoxManage interface. (boinc_9f5dbda302b39696, slot#12)
2026-04-30 06:52:49 (14404): Successfully started VM. (PID = '19664')
2026-04-30 06:52:49 (14404): Reporting VM Process ID to BOINC.
2026-04-30 06:52:49 (14404): Guest Log: BIOS: VirtualBox 7.2.8
2026-04-30 06:52:49 (14404): Guest Log: CPUID EDX: 0x178bfbff
2026-04-30 06:52:49 (14404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-30 06:52:49 (14404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-30 06:52:49 (14404): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-30 06:52:49 (14404): Detected: Web Application Enabled (http://localhost:56574)
2026-04-30 06:52:49 (14404): Preference change detected
2026-04-30 06:52:49 (14404): Setting CPU throttle for VM. (100%)
2026-04-30 06:52:49 (14404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-30 06:52:51 (14404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-30 06:52:51 (14404): Guest Log: BIOS: Booting from Hard Disk...
2026-04-30 06:52:53 (14404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-30 06:52:53 (14404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-30 06:52:53 (14404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-30 06:52:58 (14404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-30 06:52:58 (14404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-30 06:53:02 (14404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000075 main     Log opened 2026-04-30T06:53:00.855650000Z
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000181 main     OS Product: Linux
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000199 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000211 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000223 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000224 main     Process ID: 1307
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000224 main     Package type: LINUX_64BITS_GENERIC
2026-04-30 06:53:02 (14404): Guest Log: 00:00:00.000859 main     5.2.32 r132073 started. Verbose level = 0
2026-04-30 06:53:02 (14404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-30 06:53:02 (14404): Guest Log: [INFO] Mounting shared directory
2026-04-30 06:53:03 (14404): Guest Log: [INFO] Checking for init_data.xml
2026-04-30 06:53:05 (14404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-30 06:53:05 (14404): Guest Log: [INFO] Detected branch: prod
2026-04-30 06:53:05 (14404): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-30 06:53:05 (14404): Guest Log: Copying input files
2026-04-30 06:53:06 (14404): Guest Log: Copied input files into RunAtlas.
2026-04-30 06:53:06 (14404): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-30 06:53:06 (14404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-30 06:53:06 (14404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-30 06:53:06 (14404): Guest Log: Further information can be found at the LHC@home message board.
2026-04-30 06:53:12 (14404): Guest Log: 00:00:10.006299 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 549 791 000ns (GuestNow=1 777 524 792 311 519 000 ns GuestLast=1 777 531 980 861 310 000 ns fSetTimeLastLoop=true )
2026-04-30 06:54:08 (14404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-30 06:54:08 (14404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-30 06:54:08 (14404): Guest Log: 2.6.3.0 1600 1 30180 159032 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-30 06:54:08 (14404): Guest Log: copied the webapp to /var/www
2026-04-30 06:54:08 (14404): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-30 06:54:08 (14404): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-30 06:54:08 (14404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-30 06:54:09 (14404): Guest Log:  *** Starting ATLAS job. (PandaID=7118405855 taskID=49863860) ***
2026-04-30 07:41:40 (14404): Preference change detected
2026-04-30 07:41:40 (14404): Setting CPU throttle for VM. (90%)
2026-04-30 07:41:41 (14404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-30 07:48:03 (14404): Preference change detected
2026-04-30 07:48:03 (14404): Setting CPU throttle for VM. (100%)
2026-04-30 07:48:03 (14404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-30 08:33:54 (14404): Status Report: Elapsed Time: '6000.094925'
2026-04-30 08:33:54 (14404): Status Report: CPU Time: '22493.203125'
2026-04-30 09:15:05 (14404): Guest Log:  *** Job finished ***
2026-04-30 09:15:05 (14404): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:14:37,866 | INFO     | [data] copytool_out thread has finished
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:14:39,095 | INFO     | [data] queue_monitor thread has finished
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:03,355 | INFO     | [monitor] cgroup control has ended
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:04,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624796821312)>', '<ExcThread(monitor, started 139623615428352)>']
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:04,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:04,959 | INFO     | [monitor] control thread has ended
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,859 | INFO     | all workflow threads have been joined
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,859 | INFO     | end of generic workflow (traces error code: 0)
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,859 | INFO     | traces error code: 0
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,959 [wrapper] ==== pilot stdout END ====
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,962 [wrapper] ==== wrapper stdout RESUME ====
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,966 [wrapper] pilotpid: 5997
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:09,969 [wrapper] Pilot exit status: 0
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,059 [wrapper] pandaids: 7118405855
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,079 [wrapper] cleanup supervisor_pilot 26438 5998
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,082 [wrapper] Test setup, not cleaning
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,087 [wrapper] apfmon messages muted
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,089 [wrapper] ==== wrapper stdout END ====
2026-04-30 09:15:05 (14404): Guest Log: 2026-04-30 07:15:10,092 [wrapper] ==== wrapper stderr END ====
2026-04-30 09:15:05 (14404): Guest Log:  *** Error codes and diagnostics ***
2026-04-30 09:15:05 (14404): Guest Log:     "exeErrorCode": 0,
2026-04-30 09:15:05 (14404): Guest Log:     "pilotErrorCode": 0,
2026-04-30 09:15:05 (14404): Guest Log:  *** Listing of results directory ***
2026-04-30 09:15:05 (14404): Guest Log: total 211784
2026-04-30 09:15:05 (14404): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 29 05:43 runpilot2-wrapper.sh
2026-04-30 09:15:05 (14404): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 29 17:58 pilot3.tar.gz
2026-04-30 09:15:05 (14404): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 29 18:14 queuedata.json
2026-04-30 09:15:05 (14404): Guest Log: -rwxr-xr-x. 1 atlas atlas      8557 Apr 30 04:53 init_data.xml
2026-04-30 09:15:05 (14404): Guest Log: -rwxr-xr-x. 1 atlas atlas    697427 Apr 30 04:53 input.tar.gz
2026-04-30 09:15:05 (14404): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 30 04:53 start_atlas.sh
2026-04-30 09:15:05 (14404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 30 04:53 EVNT.49863858._000169.pool.root.1 -> /data/./ATLAS.root_0
2026-04-30 09:15:05 (14404): Guest Log: -rw-r--r--. 1 atlas atlas      2585 Apr 30 04:54 pandaJob.out
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas   1001878 Apr 30 04:54 agis_schedconf.cvmfs.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 30 04:54 agis_ddmendpoints.agis.ALL.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas       422 Apr 30 04:54 workernode_map.json
2026-04-30 09:15:05 (14404): Guest Log: drwx------. 5 atlas atlas      4096 Apr 30 04:54 pilot3
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas        95 Apr 30 07:13 pilot_heartbeat.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas 210662974 Apr 30 07:14 HITS.49863860._004056.pool.root.1
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 30 07:14 memory_monitor_summary.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas    280665 Apr 30 07:14 log.49863860._004056.job.log.tgz.1
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas      6348 Apr 30 07:14 heartbeat_new.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas      6239 Apr 30 07:14 heartbeat.json
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas      4797 Apr 30 07:15 pilotlog.txt
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas    785352 Apr 30 07:15 log.49863860._004056.job.log.1
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas       357 Apr 30 07:15 output.list
2026-04-30 09:15:05 (14404): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 30 07:15 runtime_log
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas   1085440 Apr 30 07:15 result.tar.gz
2026-04-30 09:15:05 (14404): Guest Log: -rw-r--r--. 1 atlas atlas      8359 Apr 30 07:15 runtime_log.err
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas       649 Apr 30 07:15 9a96e71d092c.diag
2026-04-30 09:15:05 (14404): Guest Log: Looking for outputfile HITS.49863860._004056.pool.root.1
2026-04-30 09:15:05 (14404): Guest Log: HITS file was successfully produced
2026-04-30 09:15:05 (14404): Guest Log: -rw-------. 1 atlas atlas 210662974 Apr 30 07:14 /home/atlas/RunAtlas/HITS.49863860._004056.pool.root.1
2026-04-30 09:15:06 (14404): Guest Log: Successfully finished the ATLAS job!
2026-04-30 09:15:06 (14404): Guest Log: Copying the results back to the shared directory!
2026-04-30 09:15:06 (14404): Guest Log:  *** Contents of shared directory: ***
2026-04-30 09:15:06 (14404): Guest Log: total 462024
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root 260631351 Apr 30 04:52 ATLAS.root_0
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root 210662974 Apr 30 07:15 HITS.pool.root.1
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root      8557 Apr 30 04:52 init_data.xml
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root    697427 Apr 29 18:45 input.tar.gz
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root   1085440 Apr 30 07:15 result.tar.gz
2026-04-30 09:15:06 (14404): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 29 18:45 start_atlas.sh
2026-04-30 09:15:06 (14404): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-30 09:15:06 (14404): VM Completion File Detected.
2026-04-30 09:15:06 (14404): Powering off VM.
2026-04-30 09:15:06 (14404): Successfully stopped VM.
2026-04-30 09:15:06 (14404): Deregistering VM. (boinc_9f5dbda302b39696, slot#12)
2026-04-30 09:15:06 (14404): Removing network bandwidth throttle group from VM.
2026-04-30 09:15:06 (14404): Removing VM from VirtualBox.
2026-04-30 09:15:11 (14404): called boinc_finish(0)

</stderr_txt>
]]>

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