Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:54 (1893900): wrapper (7.7.26015): starting
19:57:54 (1893900): wrapper: running run_atlas (--nthreads 12)
[2026-04-30 19:57:54] Arguments: --nthreads 12
[2026-04-30 19:57:54] Threads: 12
[2026-04-30 19:57:54] Checking for CVMFS
[2026-04-30 19:57:54] No cvmfs_config command found, will try listing directly
[2026-04-30 19:57:54] CVMFS is ok
[2026-04-30 19:57:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 19:57:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 19:57:54] Further information can be found at the LHC@home message board.
[2026-04-30 19:57:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 19:57:54] Checking for apptainer binary...
[2026-04-30 19:57:54] which: no apptainer in ((null))
[2026-04-30 19:57:54] apptainer is not installed, using version from CVMFS
[2026-04-30 19:57:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 19:57:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-04-30 19:57:54] apptainer works
[2026-04-30 19:57:54] Set ATHENA_PROC_NUMBER=12
[2026-04-30 19:57:54] Set ATHENA_CORE_NUMBER=12
[2026-04-30 19:57:54] Starting ATLAS job with PandaID=7119290952
[2026-04-30 19:57:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 20:35:13]  *** The last 200 lines of the pilot log: ***
[2026-04-30 20:35:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-30 20:35:13]  replicas=None
[2026-04-30 20:35:13]  scope=mc23_13p6TeV
[2026-04-30 20:35:13]  status=None
[2026-04-30 20:35:13]  status_code=0
[2026-04-30 20:35:13]  storage_token=
[2026-04-30 20:35:13]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/log.49863879._001222.job.log.tgz.1
[2026-04-30 20:35:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/5c/log.49863879._001222.job.log.tgz.1
[2026-04-30 20:35:13]  workdir=None
[2026-04-30 20:35:13] ]
[2026-04-30 20:35:13] 2026-04-30 18:34:30,036 | INFO     | transferring file log.49863879._001222.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/log.49863879._001222.job.log.tgz.1 to /var/lib/
[2026-04-30 20:35:13] 2026-04-30 18:34:30,036 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/log.49863879._001222.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-30 20:35:13] 2026-04-30 18:34:30,048 | INFO     | adding to output.list: log.49863879._001222.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/5c/log.49863879._001222.job.log.tg
[2026-04-30 20:35:13] 2026-04-30 18:34:30,049 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-30 20:35:13] 2026-04-30 18:34:30,049 | INFO     | summary of transferred files:
[2026-04-30 20:35:13] 2026-04-30 18:34:30,049 | INFO     |  -- lfn=log.49863879._001222.job.log.tgz.1, status_code=0, status=transferred
[2026-04-30 20:35:13] 2026-04-30 18:34:30,049 | INFO     | stage-out finished correctly
[2026-04-30 20:35:13] 2026-04-30 18:34:31,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-30 20:35:13] 2026-04-30 18:34:31,496 | INFO     | job 7119290952 has state=finished
[2026-04-30 20:35:13] 2026-04-30 18:34:31,497 | INFO     | preparing for final server update for job 7119290952 in state='finished'
[2026-04-30 20:35:13] 2026-04-30 18:34:31,497 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/jobReport.json
[2026-04-30 20:35:13] 2026-04-30 18:34:31,498 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | INFO     | this job has now completed (state=finished)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | INFO     | log transfer has been attempted: DONE
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | INFO     | job 7119290952 has finished - writing final server update
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4023484/.job.ad'
[2026-04-30 20:35:13] 2026-04-30 18:34:31,499 | INFO     | total number of processed events: 400 (read)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,516 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,517 | INFO     | extracted standard info from prmon json
[2026-04-30 20:35:13] 2026-04-30 18:34:31,517 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 20:35:13] 2026-04-30 18:34:31,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 20:35:13] 2026-04-30 18:34:31,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | fitting pss+swap vs Time
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | sum of square deviations: 7553630.0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | sum of deviations: 93796650.00000003
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | mean x (centered): 0.0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | mean y: 2713582.9655172415
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | intersect: 2713582.9655172415
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | chi2: 6.404994184911562e-05
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | current memory leak: 12.42 B/s (using 29 data points, chi2=0.00)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | could have reported an average CPU frequency of 3599 MHz (5 samples)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | ..............................
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . Timing measurements:
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . get job = 0 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . initial setup = 4 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . payload setup = 6 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . stage-in = 0 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . payload execution = 2163 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . stage-out = 0 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | . log creation = 0 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,518 | INFO     | ..............................
[2026-04-30 20:35:13] 2026-04-30 18:34:31,681 | INFO     | 
[2026-04-30 20:35:13] 2026-04-30 18:34:31,681 | INFO     | job summary report
[2026-04-30 20:35:13] 2026-04-30 18:34:31,681 | INFO     | --------------------------------------------------
[2026-04-30 20:35:13] 2026-04-30 18:34:31,681 | INFO     | PanDA job id: 7119290952
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | task id: 49863879
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | errors: (none)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | pilot state: finished 
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | transexitcode: 0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | exeerrorcode: 0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | exeerrordiag: 
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | exitcode: 0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | exitmsg: OK
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | cpuconsumptiontime: 23179 s
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | nevents: 400
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | neventsw: 0
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | pid: 1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | pgrp: 1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | corecount: 12
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | event service: False
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | sizes: {0: 2276765, 1: 2278395, 11: 2278423, 2173: 2303519, 2174: 2312541, 2175: 2312951}
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | --------------------------------------------------
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | 
[2026-04-30 20:35:13] 2026-04-30 18:34:31,682 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 20:35:13] 2026-04-30 18:34:31,702 | INFO     | job 7119290952 has completed (purged errors)
[2026-04-30 20:35:13] 2026-04-30 18:34:31,702 | INFO     | overall cleanup function is called
[2026-04-30 20:35:13] 2026-04-30 18:34:32,709 | INFO     | --- collectZombieJob: --- 10, [1904510]
[2026-04-30 20:35:13] 2026-04-30 18:34:32,710 | INFO     | zombie collector waiting for pid 1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:32,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 20:35:13] 2026-04-30 18:34:32,710 | INFO     | collected zombie processes
[2026-04-30 20:35:13] 2026-04-30 18:34:32,710 | INFO     | will attempt to kill all subprocesses of pid=1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:32,936 | INFO     | process IDs to be killed: [1904510] (in reverse order)
[2026-04-30 20:35:13] 2026-04-30 18:34:33,055 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 20:35:13] 2026-04-30 18:34:33,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 20:35:13] 2026-04-30 18:34:33,073 | INFO     | did not find any defunct processes belonging to 1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:33,088 | INFO     | did not find any defunct processes belonging to 1904510
[2026-04-30 20:35:13] 2026-04-30 18:34:33,088 | INFO     | Ready for new job
[2026-04-30 20:35:13] 2026-04-30 18:34:33,089 | INFO     | ***************************************
[2026-04-30 20:35:13] 2026-04-30 18:34:33,089 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 20:35:13] 2026-04-30 18:34:33,089 | INFO     | ***************************************
[2026-04-30 20:35:13] 2026-04-30 18:34:33,089 | INFO     | 
[2026-04-30 20:35:13] 2026-04-30 18:34:33,094 | INFO     | architecture information:
[2026-04-30 20:35:13] 2026-04-30 18:34:33,094 | INFO     | executing command: cat /etc/os-release
[2026-04-30 20:35:13] 2026-04-30 18:34:33,107 | INFO     | cat /etc/os-release:
[2026-04-30 20:35:13] NAME="CentOS Linux"
[2026-04-30 20:35:13] VERSION="7 (Core)"
[2026-04-30 20:35:13] ID="centos"
[2026-04-30 20:35:13] ID_LIKE="rhel fedora"
[2026-04-30 20:35:13] VERSION_ID="7"
[2026-04-30 20:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 20:35:13] ANSI_COLOR="0;31"
[2026-04-30 20:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 20:35:13] HOME_URL="https://www.centos.org/"
[2026-04-30 20:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 20:35:13] 
[2026-04-30 20:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 20:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 20:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 20:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 20:35:13] 
[2026-04-30 20:35:13] 2026-04-30 18:34:33,108 | INFO     | ***************************************
[2026-04-30 20:35:13] 2026-04-30 18:34:33,611 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-30 20:35:13] 2026-04-30 18:34:33,628 | INFO     | sufficient remaining disk space (98515812352 B)
[2026-04-30 20:35:13] 2026-04-30 18:34:33,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 20:35:13] 2026-04-30 18:34:33,628 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 20:35:13] 2026-04-30 18:34:33,628 | INFO     | update_server=False
[2026-04-30 20:35:13] 2026-04-30 18:34:33,629 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 20:35:13] 2026-04-30 18:34:33,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 20:35:13] 2026-04-30 18:34:33,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 20:35:13] 2026-04-30 18:34:33,772 | INFO     | all job control threads have been joined
[2026-04-30 20:35:13] 2026-04-30 18:34:34,282 | INFO     | all data control threads have been joined
[2026-04-30 20:35:13] 2026-04-30 18:34:34,634 | INFO     | [job] retrieve thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:34,695 | INFO     | [data] copytool_in thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:34,775 | INFO     | [job] control thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:34,905 | INFO     | all payload control threads have been joined
[2026-04-30 20:35:13] 2026-04-30 18:34:35,038 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,287 | INFO     | [data] control thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,366 | INFO     | [payload] validate_post thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,635 | INFO     | [data] copytool_out thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,793 | WARNING  | process 1904510 can no longer be monitored (due to stat problems) - aborting
[2026-04-30 20:35:13] 2026-04-30 18:34:35,842 | INFO     | [payload] failed_post thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,848 | INFO     | [job] validate thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,910 | INFO     | [payload] control thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,941 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:35,998 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 20:35:13] 2026-04-30 18:34:35,999 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 20:35:13] 2026-04-30 18:34:35,999 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-30 20:35:13] 2026-04-30 18:34:35,999 | WARNING  | maxPSS not found in memory monitor output
[2026-04-30 20:35:13] 2026-04-30 18:34:36,000 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/payload.stdout) since it has not been created yet
[2026-04-30 20:35:13] 2026-04-30 18:34:36,000 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-30 20:35:13] 2026-04-30 18:34:36,004 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:36,014 | INFO     | sufficient remaining disk space (98505326592 B)
[2026-04-30 20:35:13] 2026-04-30 18:34:36,014 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-30 20:35:13] 2026-04-30 18:34:36,014 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119290952/HITS.49863879._001222.pool.root.1 since it does not exist
[2026-04-30 20:35:13] 2026-04-30 18:34:36,247 | INFO     | number of running child processes to parent process 1904510: 1
[2026-04-30 20:35:13] 2026-04-30 18:34:36,247 | INFO     | maximum number of monitored processes: 6
[2026-04-30 20:35:13] 2026-04-30 18:34:36,247 | INFO     | aborting job monitoring since job object (job id=7119290952) has expired
[2026-04-30 20:35:13] 2026-04-30 18:34:36,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 20:35:13] 2026-04-30 18:34:36,247 | INFO     | will abort loop
[2026-04-30 20:35:13] 2026-04-30 18:34:36,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 20:35:13] 2026-04-30 18:34:37,252 | INFO     | [job] job monitor thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:37,585 | INFO     | [job] queue monitor thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:37,635 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:34:44,189 | INFO     | job.realtimelogging is not enabled
[2026-04-30 20:35:13] 2026-04-30 18:34:45,194 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 20:35:13] 2026-04-30 18:35:04,680 | INFO     | PID=1898479 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 20:35:13] 2026-04-30 18:35:04,680 | INFO     | .. there are 19 such processes running
[2026-04-30 20:35:13] 2026-04-30 18:35:04,681 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 20:35:13] 2026-04-30 18:35:04,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 20:35:13] 2026-04-30 18:35:04,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 20:35:13] 2026-04-30 18:35:08,130 | INFO     | [monitor] cgroup control has ended
[2026-04-30 20:35:13] 2026-04-30 18:35:08,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23222387963712)>', '<ExcThread(monitor, started 23222153398016)>']
[2026-04-30 20:35:13] 2026-04-30 18:35:08,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 20:35:13] 2026-04-30 18:35:08,700 | INFO     | [monitor] control thread has ended
[2026-04-30 20:35:13] 2026-04-30 18:35:13,711 | INFO     | all workflow threads have been joined
[2026-04-30 20:35:13] 2026-04-30 18:35:13,712 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 20:35:13] 2026-04-30 18:35:13,712 | INFO     | traces error code: 0
[2026-04-30 20:35:13] 2026-04-30 18:35:13,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 20:35:13] 2026-04-30 18:35:13,813 [wrapper] ==== pilot stdout END ====
[2026-04-30 20:35:13] 2026-04-30 18:35:13,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 20:35:13] 2026-04-30 18:35:13,816 [wrapper] pilotpid: 1898479
[2026-04-30 20:35:13] 2026-04-30 18:35:13,817 [wrapper] Pilot exit status: 0
[2026-04-30 20:35:13] 2026-04-30 18:35:13,821 [wrapper] pandaids: 7119290952
[2026-04-30 20:35:13] 2026-04-30 18:35:13,898 [wrapper] cleanup supervisor_pilot 2212398 1898480
[2026-04-30 20:35:13] 2026-04-30 18:35:13,901 [wrapper] Test setup, not cleaning
[2026-04-30 20:35:13] 2026-04-30 18:35:13,903 [wrapper] apfmon messages muted
[2026-04-30 20:35:13] 2026-04-30 18:35:13,905 [wrapper] ==== wrapper stdout END ====
[2026-04-30 20:35:13] 2026-04-30 18:35:13,907 [wrapper] ==== wrapper stderr END ====
[2026-04-30 20:35:13]  *** Error codes and diagnostics ***
[2026-04-30 20:35:13]     "exeErrorCode": 0,
[2026-04-30 20:35:13]     "pilotErrorCode": 0,
[2026-04-30 20:35:13]  *** Listing of results directory ***
[2026-04-30 20:35:13] total 466948
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc    683926 Apr 29 19:18 pilot3.tar.gz
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc      5631 Apr 29 19:22 queuedata.json
[2026-04-30 20:35:13] -rwx------. 1 boinc boinc     36322 Apr 29 19:23 runpilot2-wrapper.sh
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc       100 Apr 30 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 20:35:13] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 19:57 run_atlas
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc       105 Apr 30 19:57 job.xml
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc     15667 Apr 30 19:57 start_atlas.sh
[2026-04-30 20:35:13] drwxrwx--x. 2 boinc boinc      4096 Apr 30 19:57 shared
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc    697409 Apr 30 19:57 input.tar.gz
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc      6630 Apr 30 19:57 init_data.xml
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc 259665169 Apr 30 19:57 EVNT.49863876._000051.pool.root.1
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc         0 Apr 30 19:57 boinc_lockfile
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc      2574 Apr 30 19:57 pandaJob.out
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc    996122 Apr 30 19:58 agis_schedconf.cvmfs.json
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc   1510091 Apr 30 19:58 agis_ddmendpoints.agis.ALL.json
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc       445 Apr 30 19:58 workernode_map.json
[2026-04-30 20:35:13] drwx------. 5 boinc boinc      4096 Apr 30 19:58 pilot3
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc 213167688 Apr 30 20:34 HITS.49863879._001222.pool.root.1
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc       487 Apr 30 20:34 boinc_task_state.xml
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc      1031 Apr 30 20:34 memory_monitor_summary.json
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc    341024 Apr 30 20:34 log.49863879._001222.job.log.tgz.1
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc      6377 Apr 30 20:34 heartbeat_new.json
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc      6268 Apr 30 20:34 heartbeat.json
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc        95 Apr 30 20:35 pilot_heartbeat.json
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc      8192 Apr 30 20:35 boinc_mmap_file
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc        27 Apr 30 20:35 wrapper_checkpoint.txt
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc      6450 Apr 30 20:35 pilotlog.txt
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc    253488 Apr 30 20:35 log.49863879._001222.job.log.1
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc       357 Apr 30 20:35 output.list
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc       410 Apr 30 20:35 runtime_log
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc    614400 Apr 30 20:35 result.tar.gz
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc      8846 Apr 30 20:35 runtime_log.err
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc       661 Apr 30 20:35 3e9aa2c3b586.diag
[2026-04-30 20:35:13] -rw-r--r--. 1 boinc boinc     21914 Apr 30 20:35 stderr.txt
[2026-04-30 20:35:13] HITS file was successfully produced:
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc 213167688 Apr 30 20:34 shared/HITS.pool.root.1
[2026-04-30 20:35:13]  *** Contents of shared directory: ***
[2026-04-30 20:35:13] total 463060
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc     15667 Apr 30 19:57 start_atlas.sh
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc    697409 Apr 30 19:57 input.tar.gz
[2026-04-30 20:35:13] -rw-r--r--. 2 boinc boinc 259665169 Apr 30 19:57 ATLAS.root_0
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc 213167688 Apr 30 20:34 HITS.pool.root.1
[2026-04-30 20:35:13] -rw-------. 1 boinc boinc    614400 Apr 30 20:35 result.tar.gz
20:35:15 (1893900): run_atlas exited; CPU time 23216.929542
20:35:15 (1893900): called boinc_finish(0)

</stderr_txt>
]]>

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