Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:23 (2264573): wrapper (7.7.26015): starting
20:35:23 (2264573): wrapper: running run_atlas (--nthreads 12)
[2026-04-30 20:35:23] Arguments: --nthreads 12
[2026-04-30 20:35:23] Threads: 12
[2026-04-30 20:35:23] Checking for CVMFS
[2026-04-30 20:35:23] No cvmfs_config command found, will try listing directly
[2026-04-30 20:35:23] CVMFS is ok
[2026-04-30 20:35:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 20:35:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 20:35:23] Further information can be found at the LHC@home message board.
[2026-04-30 20:35:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 20:35:23] Checking for apptainer binary...
[2026-04-30 20:35:23] which: no apptainer in ((null))
[2026-04-30 20:35:23] apptainer is not installed, using version from CVMFS
[2026-04-30 20:35:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 20:35:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-04-30 20:35:23] apptainer works
[2026-04-30 20:35:23] Set ATHENA_PROC_NUMBER=12
[2026-04-30 20:35:23] Set ATHENA_CORE_NUMBER=12
[2026-04-30 20:35:23] Starting ATLAS job with PandaID=7119348671
[2026-04-30 20:35:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 21:19:43]  *** The last 200 lines of the pilot log: ***
[2026-04-30 21:19:43]  filetype=log
[2026-04-30 21:19:43]  guid=a83b49a5-1ed2-46ee-87e6-35ccc4357a48
[2026-04-30 21:19:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-30 21:19:43]  is_altstaged=None
[2026-04-30 21:19:43]  is_tar=False
[2026-04-30 21:19:43]  lfn=log.49863851._004898.job.log.tgz.1
[2026-04-30 21:19:43]  mtime=0
[2026-04-30 21:19:43]  protocol_id=None
[2026-04-30 21:19:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-30 21:19:43]  replicas=None
[2026-04-30 21:19:43]  scope=mc23_13p6TeV
[2026-04-30 21:19:43]  status=None
[2026-04-30 21:19:43]  status_code=0
[2026-04-30 21:19:43]  storage_token=
[2026-04-30 21:19:43]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119348671/log.49863851._004898.job.log.tgz.1
[2026-04-30 21:19:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/43/log.49863851._004898.job.log.tgz.1
[2026-04-30 21:19:43]  workdir=None
[2026-04-30 21:19:43] ]
[2026-04-30 21:19:43] 2026-04-30 19:18:35,866 | INFO     | transferring file log.49863851._004898.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119348671/log.49863851._004898.job.log.tgz.1 to /var/lib/
[2026-04-30 21:19:43] 2026-04-30 19:18:35,866 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119348671/log.49863851._004898.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-30 21:19:43] 2026-04-30 19:18:35,882 | INFO     | adding to output.list: log.49863851._004898.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/43/log.49863851._004898.job.log.tg
[2026-04-30 21:19:43] 2026-04-30 19:18:35,882 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-30 21:19:43] 2026-04-30 19:18:35,882 | INFO     | summary of transferred files:
[2026-04-30 21:19:43] 2026-04-30 19:18:35,883 | INFO     |  -- lfn=log.49863851._004898.job.log.tgz.1, status_code=0, status=transferred
[2026-04-30 21:19:43] 2026-04-30 19:18:35,883 | INFO     | stage-out finished correctly
[2026-04-30 21:19:43] 2026-04-30 19:18:36,004 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-30 21:19:43] 2026-04-30 19:18:36,052 | INFO     | job 7119348671 has state=finished
[2026-04-30 21:19:43] 2026-04-30 19:18:36,052 | INFO     | preparing for final server update for job 7119348671 in state='finished'
[2026-04-30 21:19:43] 2026-04-30 19:18:36,052 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119348671/jobReport.json
[2026-04-30 21:19:43] 2026-04-30 19:18:36,054 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-30 21:19:43] 2026-04-30 19:18:36,054 | INFO     | this job has now completed (state=finished)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,054 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,054 | INFO     | log transfer has been attempted: DONE
[2026-04-30 21:19:43] 2026-04-30 19:18:36,054 | INFO     | job 7119348671 has finished - writing final server update
[2026-04-30 21:19:43] 2026-04-30 19:18:36,055 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4023484/.job.ad'
[2026-04-30 21:19:43] 2026-04-30 19:18:36,055 | INFO     | total number of processed events: 400 (read)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,076 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7119348671/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,077 | INFO     | extracted standard info from prmon json
[2026-04-30 21:19:43] 2026-04-30 19:18:36,077 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 21:19:43] 2026-04-30 19:18:36,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 21:19:43] 2026-04-30 19:18:36,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 21:19:43] 2026-04-30 19:18:36,078 | INFO     | fitting pss+swap vs Time
[2026-04-30 21:19:43] 2026-04-30 19:18:36,078 | INFO     | sum of square deviations: 13283970.0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,078 | INFO     | sum of deviations: 256824396.0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,078 | INFO     | mean x (centered): 0.0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | mean y: 2742335.4285714286
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | intersect: 2742335.4285714286
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | chi2: 0.0006163659658415057
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | current memory leak: 19.33 B/s (using 35 data points, chi2=0.00)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | could have reported an average CPU frequency of 3593 MHz (5 samples)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | ..............................
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . Timing measurements:
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . get job = 0 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . initial setup = 4 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . payload setup = 5 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . stage-in = 0 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . payload execution = 2562 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . stage-out = 0 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | . log creation = 0 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,079 | INFO     | ..............................
[2026-04-30 21:19:43] 2026-04-30 19:18:36,132 | INFO     | 
[2026-04-30 21:19:43] 2026-04-30 19:18:36,132 | INFO     | job summary report
[2026-04-30 21:19:43] 2026-04-30 19:18:36,132 | INFO     | --------------------------------------------------
[2026-04-30 21:19:43] 2026-04-30 19:18:36,132 | INFO     | PanDA job id: 7119348671
[2026-04-30 21:19:43] 2026-04-30 19:18:36,132 | INFO     | task id: 49863851
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | errors: (none)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | pilot state: finished 
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | transexitcode: 0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | exeerrorcode: 0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | exeerrordiag: 
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | exitcode: 0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | exitmsg: OK
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | cpuconsumptiontime: 27778 s
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | nevents: 400
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | neventsw: 0
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | pid: 2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | pgrp: 2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | corecount: 12
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | event service: False
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | sizes: {0: 2276678, 1: 2278450, 11: 2278450, 2571: 2303715, 2572: 2312963}
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | --------------------------------------------------
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | 
[2026-04-30 21:19:43] 2026-04-30 19:18:36,133 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | job 7119348671 has completed (purged errors)
[2026-04-30 21:19:43] 2026-04-30 19:18:36,151 | INFO     | overall cleanup function is called
[2026-04-30 21:19:43] 2026-04-30 19:18:37,158 | INFO     | --- collectZombieJob: --- 10, [2274925]
[2026-04-30 21:19:43] 2026-04-30 19:18:37,159 | INFO     | zombie collector waiting for pid 2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:37,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 21:19:43] 2026-04-30 19:18:37,159 | INFO     | collected zombie processes
[2026-04-30 21:19:43] 2026-04-30 19:18:37,159 | INFO     | will attempt to kill all subprocesses of pid=2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:37,396 | INFO     | process IDs to be killed: [2274925] (in reverse order)
[2026-04-30 21:19:43] 2026-04-30 19:18:37,516 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 21:19:43] 2026-04-30 19:18:37,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 21:19:43] 2026-04-30 19:18:37,533 | INFO     | did not find any defunct processes belonging to 2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:37,547 | INFO     | did not find any defunct processes belonging to 2274925
[2026-04-30 21:19:43] 2026-04-30 19:18:37,547 | INFO     | Ready for new job
[2026-04-30 21:19:43] 2026-04-30 19:18:37,548 | INFO     | ***************************************
[2026-04-30 21:19:43] 2026-04-30 19:18:37,550 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 21:19:43] 2026-04-30 19:18:37,550 | INFO     | ***************************************
[2026-04-30 21:19:43] 2026-04-30 19:18:37,550 | INFO     | 
[2026-04-30 21:19:43] 2026-04-30 19:18:37,556 | INFO     | architecture information:
[2026-04-30 21:19:43] 2026-04-30 19:18:37,556 | INFO     | executing command: cat /etc/os-release
[2026-04-30 21:19:43] 2026-04-30 19:18:37,569 | INFO     | cat /etc/os-release:
[2026-04-30 21:19:43] NAME="CentOS Linux"
[2026-04-30 21:19:43] VERSION="7 (Core)"
[2026-04-30 21:19:43] ID="centos"
[2026-04-30 21:19:43] ID_LIKE="rhel fedora"
[2026-04-30 21:19:43] VERSION_ID="7"
[2026-04-30 21:19:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 21:19:43] ANSI_COLOR="0;31"
[2026-04-30 21:19:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 21:19:43] HOME_URL="https://www.centos.org/"
[2026-04-30 21:19:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 21:19:43] 
[2026-04-30 21:19:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 21:19:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 21:19:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 21:19:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 21:19:43] 
[2026-04-30 21:19:43] 2026-04-30 19:18:37,569 | INFO     | ***************************************
[2026-04-30 21:19:43] 2026-04-30 19:18:37,802 | WARNING  | process 2274925 can no longer be monitored (due to stat problems) - aborting
[2026-04-30 21:19:43] 2026-04-30 19:18:37,998 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 21:19:43] 2026-04-30 19:18:38,072 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-30 21:19:43] 2026-04-30 19:18:38,086 | INFO     | sufficient remaining disk space (106206068736 B)
[2026-04-30 21:19:43] 2026-04-30 19:18:38,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 21:19:43] 2026-04-30 19:18:38,086 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 21:19:43] 2026-04-30 19:18:38,086 | INFO     | update_server=False
[2026-04-30 21:19:43] 2026-04-30 19:18:38,086 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 21:19:43] 2026-04-30 19:18:38,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 21:19:43] 2026-04-30 19:18:38,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 21:19:43] 2026-04-30 19:18:38,216 | INFO     | all data control threads have been joined
[2026-04-30 21:19:43] 2026-04-30 19:18:38,226 | INFO     | number of running child processes to parent process 2274925: 1
[2026-04-30 21:19:43] 2026-04-30 19:18:38,227 | INFO     | maximum number of monitored processes: 6
[2026-04-30 21:19:43] 2026-04-30 19:18:38,227 | INFO     | aborting job monitoring since job object (job id=7119348671) has expired
[2026-04-30 21:19:43] 2026-04-30 19:18:38,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 21:19:43] 2026-04-30 19:18:38,227 | INFO     | will abort loop
[2026-04-30 21:19:43] 2026-04-30 19:18:38,533 | INFO     | all job control threads have been joined
[2026-04-30 21:19:43] 2026-04-30 19:18:38,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 21:19:43] 2026-04-30 19:18:39,091 | INFO     | [job] retrieve thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,092 | INFO     | [job] queue monitor thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,222 | INFO     | [data] control thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,232 | INFO     | [job] job monitor thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,286 | INFO     | [job] validate thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,362 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,374 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,468 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,488 | INFO     | all payload control threads have been joined
[2026-04-30 21:19:43] 2026-04-30 19:18:39,539 | INFO     | [job] control thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,606 | INFO     | [payload] validate_post thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:39,664 | INFO     | [data] copytool_in thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:40,149 | INFO     | [payload] failed_post thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:40,494 | INFO     | [payload] control thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:40,938 | INFO     | [data] copytool_out thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:41,684 | INFO     | job.realtimelogging is not enabled
[2026-04-30 21:19:43] 2026-04-30 19:18:42,093 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:18:42,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 21:19:43] 2026-04-30 19:19:07,995 | INFO     | PID=2269093 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 21:19:43] 2026-04-30 19:19:07,996 | INFO     | .. there are 19 such processes running
[2026-04-30 21:19:43] 2026-04-30 19:19:07,996 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 21:19:43] 2026-04-30 19:19:07,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 21:19:43] 2026-04-30 19:19:07,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 21:19:43] 2026-04-30 19:19:37,048 | INFO     | [monitor] cgroup control has ended
[2026-04-30 21:19:43] 2026-04-30 19:19:37,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23066718893888)>', '<ExcThread(monitor, started 23066479695616)>']
[2026-04-30 21:19:43] 2026-04-30 19:19:38,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 21:19:43] 2026-04-30 19:19:38,140 | INFO     | [monitor] control thread has ended
[2026-04-30 21:19:43] 2026-04-30 19:19:42,894 | INFO     | all workflow threads have been joined
[2026-04-30 21:19:43] 2026-04-30 19:19:42,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 21:19:43] 2026-04-30 19:19:42,895 | INFO     | traces error code: 0
[2026-04-30 21:19:43] 2026-04-30 19:19:42,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 21:19:43] 2026-04-30 19:19:43,023 [wrapper] ==== pilot stdout END ====
[2026-04-30 21:19:43] 2026-04-30 19:19:43,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 21:19:43] 2026-04-30 19:19:43,028 [wrapper] pilotpid: 2269093
[2026-04-30 21:19:43] 2026-04-30 19:19:43,030 [wrapper] Pilot exit status: 0
[2026-04-30 21:19:43] 2026-04-30 19:19:43,039 [wrapper] pandaids: 7119348671
[2026-04-30 21:19:43] 2026-04-30 19:19:43,116 [wrapper] cleanup supervisor_pilot 2487220 2269094
[2026-04-30 21:19:43] 2026-04-30 19:19:43,118 [wrapper] Test setup, not cleaning
[2026-04-30 21:19:43] 2026-04-30 19:19:43,121 [wrapper] apfmon messages muted
[2026-04-30 21:19:43] 2026-04-30 19:19:43,123 [wrapper] ==== wrapper stdout END ====
[2026-04-30 21:19:43] 2026-04-30 19:19:43,126 [wrapper] ==== wrapper stderr END ====
[2026-04-30 21:19:43]  *** Error codes and diagnostics ***
[2026-04-30 21:19:43]     "exeErrorCode": 0,
[2026-04-30 21:19:43]     "pilotErrorCode": 0,
[2026-04-30 21:19:43]  *** Listing of results directory ***
[2026-04-30 21:19:43] total 477000
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc    683926 Apr 29 19:18 pilot3.tar.gz
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc      5631 Apr 29 19:22 queuedata.json
[2026-04-30 21:19:43] -rwx------. 1 boinc boinc     36322 Apr 29 19:23 runpilot2-wrapper.sh
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc       100 Apr 30 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 21:19:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 20:35 run_atlas
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc       105 Apr 30 20:35 job.xml
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc 263604833 Apr 30 20:35 EVNT.49863848._000192.pool.root.1
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc     15667 Apr 30 20:35 start_atlas.sh
[2026-04-30 21:19:43] drwxrwx--x. 2 boinc boinc      4096 Apr 30 20:35 shared
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc    697438 Apr 30 20:35 input.tar.gz
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc      6630 Apr 30 20:35 init_data.xml
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc         0 Apr 30 20:35 boinc_lockfile
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc      2650 Apr 30 20:35 pandaJob.out
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc    997586 Apr 30 20:35 agis_schedconf.cvmfs.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc   1510091 Apr 30 20:35 agis_ddmendpoints.agis.ALL.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc       445 Apr 30 20:35 workernode_map.json
[2026-04-30 21:19:43] drwx------. 5 boinc boinc      4096 Apr 30 20:35 pilot3
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc       487 Apr 30 21:18 boinc_task_state.xml
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc 219448568 Apr 30 21:18 HITS.49863851._004898.pool.root.1
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc        95 Apr 30 21:18 pilot_heartbeat.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc      1028 Apr 30 21:18 memory_monitor_summary.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc    341528 Apr 30 21:18 log.49863851._004898.job.log.tgz.1
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc      6378 Apr 30 21:18 heartbeat_new.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc      6269 Apr 30 21:18 heartbeat.json
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc      5439 Apr 30 21:19 pilotlog.txt
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc      8192 Apr 30 21:19 boinc_mmap_file
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc        27 Apr 30 21:19 wrapper_checkpoint.txt
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc    288108 Apr 30 21:19 log.49863851._004898.job.log.1
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc       357 Apr 30 21:19 output.list
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc       410 Apr 30 21:19 runtime_log
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc    645120 Apr 30 21:19 result.tar.gz
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc      8846 Apr 30 21:19 runtime_log.err
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc       657 Apr 30 21:19 3e9ab1f31640.diag
[2026-04-30 21:19:43] -rw-r--r--. 1 boinc boinc     21094 Apr 30 21:19 stderr.txt
[2026-04-30 21:19:43] HITS file was successfully produced:
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc 219448568 Apr 30 21:18 shared/HITS.pool.root.1
[2026-04-30 21:19:43]  *** Contents of shared directory: ***
[2026-04-30 21:19:43] total 473076
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc 263604833 Apr 30 20:35 ATLAS.root_0
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc     15667 Apr 30 20:35 start_atlas.sh
[2026-04-30 21:19:43] -rw-r--r--. 2 boinc boinc    697438 Apr 30 20:35 input.tar.gz
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc 219448568 Apr 30 21:18 HITS.pool.root.1
[2026-04-30 21:19:43] -rw-------. 1 boinc boinc    645120 Apr 30 21:19 result.tar.gz
21:19:45 (2264573): run_atlas exited; CPU time 27842.249823
21:19:45 (2264573): called boinc_finish(0)

</stderr_txt>
]]>

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