Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:51:16 (3526150): wrapper (7.7.26015): starting
14:51:16 (3526150): wrapper: running run_atlas (--nthreads 2)
[2026-05-02 14:51:16] Arguments: --nthreads 2
[2026-05-02 14:51:16] Threads: 2
[2026-05-02 14:51:16] Checking for CVMFS
[2026-05-02 14:51:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 14:51:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 14:51:23] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 14:51:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 14:51:24] 2.13.3.0 3454996 4048 42376 159131 1 49 3614796 4096001 0 130560 0 274726 97.765 802733 456 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-05-02 14:51:24] CVMFS is ok
[2026-05-02 14:51:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 14:51:24] Checking for apptainer binary...
[2026-05-02 14:51:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 14:51:24] Running /usr/bin/apptainer --version
[2026-05-02 14:51:24] apptainer version 1.4.5
[2026-05-02 14:51:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 14:51:24] ahanllin03
[2026-05-02 14:51:24] apptainer works
[2026-05-02 14:51:24] Set ATHENA_PROC_NUMBER=2
[2026-05-02 14:51:24] Set ATHENA_CORE_NUMBER=2
[2026-05-02 14:51:24] Starting ATLAS job with PandaID=7119308577
[2026-05-02 14:51:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 04:59:25]  *** The last 200 lines of the pilot log: ***
[2026-05-03 04:59:25] 2026-05-03 02:58:37,878 | INFO     | stage-out finished correctly
[2026-05-03 04:59:25] 2026-05-03 02:58:38,097 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 04:59:25] 2026-05-03 02:58:38,696 | INFO     | monitor loop #3817: job 0:7119308577 is in state 'finished'
[2026-05-03 04:59:25] 2026-05-03 02:58:38,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,734 | INFO     | job 7119308577 has state=finished
[2026-05-03 04:59:25] 2026-05-03 02:58:39,734 | INFO     | preparing for final server update for job 7119308577 in state='finished'
[2026-05-03 04:59:25] 2026-05-03 02:58:39,734 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7119308577/jobReport.json
[2026-05-03 04:59:25] 2026-05-03 02:58:39,739 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-05-03 04:59:25] 2026-05-03 02:58:39,740 | INFO     | this job has now completed (state=finished)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,740 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,740 | INFO     | log transfer has been attempted: DONE
[2026-05-03 04:59:25] 2026-05-03 02:58:39,740 | INFO     | job 7119308577 has finished - writing final server update
[2026-05-03 04:59:25] 2026-05-03 02:58:39,741 | INFO     | total number of processed events: 400 (read)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,742 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7119308577/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,743 | INFO     | extracted standard info from prmon json
[2026-05-03 04:59:25] 2026-05-03 02:58:39,743 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 04:59:25] 2026-05-03 02:58:39,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 04:59:25] 2026-05-03 02:58:39,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 04:59:25] 2026-05-03 02:58:39,778 | INFO     | fitting pss+swap vs Time
[2026-05-03 04:59:25] 2026-05-03 02:58:39,780 | INFO     | sum of square deviations: 179230865632.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,838 | INFO     | sum of deviations: -1618330731.9999847
[2026-05-03 04:59:25] 2026-05-03 02:58:39,838 | INFO     | mean x (centered): 0.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,838 | INFO     | mean y: 2254902.582232893
[2026-05-03 04:59:25] 2026-05-03 02:58:39,839 | INFO     | intersect: 2254902.582232893
[2026-05-03 04:59:25] 2026-05-03 02:58:39,842 | INFO     | chi2: 2.6366747758530424
[2026-05-03 04:59:25] 2026-05-03 02:58:39,844 | INFO     | sum of square deviations: 176022749667.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,905 | INFO     | sum of deviations: 44184608514.49999
[2026-05-03 04:59:25] 2026-05-03 02:58:39,905 | INFO     | mean x (centered): 0.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,906 | INFO     | mean y: 2257069.2330917874
[2026-05-03 04:59:25] 2026-05-03 02:58:39,906 | INFO     | intersect: 2257069.2330917874
[2026-05-03 04:59:25] 2026-05-03 02:58:39,909 | INFO     | chi2: 1.9841138841632586
[2026-05-03 04:59:25] 2026-05-03 02:58:39,909 | INFO     | current chi2=1.9841138841632586 (change=24.74938880084902 %)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,909 | INFO     | right removable region: 827
[2026-05-03 04:59:25] 2026-05-03 02:58:39,912 | INFO     | sum of square deviations: 176022749667.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,973 | INFO     | sum of deviations: -125321669386.49995
[2026-05-03 04:59:25] 2026-05-03 02:58:39,973 | INFO     | mean x (centered): 0.0
[2026-05-03 04:59:25] 2026-05-03 02:58:39,973 | INFO     | mean y: 2260767.643719807
[2026-05-03 04:59:25] 2026-05-03 02:58:39,974 | INFO     | intersect: 2260767.643719807
[2026-05-03 04:59:25] 2026-05-03 02:58:39,976 | INFO     | chi2: 1.1041576325210691
[2026-05-03 04:59:25] 2026-05-03 02:58:39,977 | INFO     | current chi2=1.1041576325210691 (change=58.12310101218906 %)
[2026-05-03 04:59:25] 2026-05-03 02:58:39,979 | INFO     | sum of square deviations: 172853146052.0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,039 | INFO     | sum of deviations: -107761181688.99997
[2026-05-03 04:59:25] 2026-05-03 02:58:40,040 | INFO     | mean x (centered): 0.0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,040 | INFO     | mean y: 2259919.268529769
[2026-05-03 04:59:25] 2026-05-03 02:58:40,040 | INFO     | intersect: 2259919.268529769
[2026-05-03 04:59:25] 2026-05-03 02:58:40,043 | INFO     | chi2: 1.0611327324649475
[2026-05-03 04:59:25] 2026-05-03 02:58:40,043 | INFO     | current chi2=1.0611327324649475 (change=3.896626603747232 %)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,043 | INFO     | left removable region: 10
[2026-05-03 04:59:25] 2026-05-03 02:58:40,045 | INFO     | sum of square deviations: 169100130568.0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,105 | INFO     | sum of deviations: -61905539082.99998
[2026-05-03 04:59:25] 2026-05-03 02:58:40,106 | INFO     | mean x (centered): 0.0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,106 | INFO     | mean y: 2262141.610771114
[2026-05-03 04:59:25] 2026-05-03 02:58:40,106 | INFO     | intersect: 2262141.610771114
[2026-05-03 04:59:25] 2026-05-03 02:58:40,109 | INFO     | chi2: 0.4035837767991735
[2026-05-03 04:59:25] 2026-05-03 02:58:40,109 | INFO     | current memory leak: -0.37 B/s (using 817 data points, chi2=0.40)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | could have reported an average CPU frequency of 3192 MHz (32 samples)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | ..............................
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | . Timing measurements:
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | . get job = 0 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | . initial setup = 8 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,111 | INFO     | . payload setup = 13 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,112 | INFO     | . stage-in = 0 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,112 | INFO     | . payload execution = 50774 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,112 | INFO     | . stage-out = 7 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,112 | INFO     | . log creation = 0 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,112 | INFO     | ..............................
[2026-05-03 04:59:25] 2026-05-03 02:58:40,409 | INFO     | 
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | job summary report
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | --------------------------------------------------
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | PanDA job id: 7119308577
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | task id: 49963770
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | errors: (none)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | pilot state: finished 
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | transexitcode: 0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | exeerrorcode: 0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | exeerrordiag: 
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | exitcode: 0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,411 | INFO     | exitmsg: OK
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | cpuconsumptiontime: 98497 s
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | nevents: 400
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | neventsw: 0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | pid: 3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | pgrp: 3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | corecount: 2
[2026-05-03 04:59:25] 2026-05-03 02:58:40,412 | INFO     | event service: False
[2026-05-03 04:59:25] 2026-05-03 02:58:40,413 | INFO     | sizes: {0: 2274565, 1: 2275257, 2: 2277086, 50792: 2325083, 50793: 2325082, 50801: 2334362, 50803: 2334500}
[2026-05-03 04:59:25] 2026-05-03 02:58:40,413 | INFO     | --------------------------------------------------
[2026-05-03 04:59:25] 2026-05-03 02:58:40,413 | INFO     | 
[2026-05-03 04:59:25] 2026-05-03 02:58:40,413 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-05-03 04:59:25] 2026-05-03 02:58:40,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | job 7119308577 has completed (purged errors)
[2026-05-03 04:59:25] 2026-05-03 02:58:40,441 | INFO     | overall cleanup function is called
[2026-05-03 04:59:25] 2026-05-03 02:58:41,450 | INFO     | --- collectZombieJob: --- 10, [3534550]
[2026-05-03 04:59:25] 2026-05-03 02:58:41,450 | INFO     | zombie collector waiting for pid 3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:41,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 04:59:25] 2026-05-03 02:58:41,450 | INFO     | collected zombie processes
[2026-05-03 04:59:25] 2026-05-03 02:58:41,450 | INFO     | will attempt to kill all subprocesses of pid=3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:41,498 | INFO     | process IDs to be killed: [3534550] (in reverse order)
[2026-05-03 04:59:25] 2026-05-03 02:58:41,540 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 04:59:25] 2026-05-03 02:58:41,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 04:59:25] 2026-05-03 02:58:41,543 | INFO     | did not find any defunct processes belonging to 3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:41,545 | INFO     | did not find any defunct processes belonging to 3534550
[2026-05-03 04:59:25] 2026-05-03 02:58:41,545 | INFO     | Ready for new job
[2026-05-03 04:59:25] 2026-05-03 02:58:41,548 | INFO     | ***************************************
[2026-05-03 04:59:25] 2026-05-03 02:58:41,548 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 04:59:25] 2026-05-03 02:58:41,549 | INFO     | ***************************************
[2026-05-03 04:59:25] 2026-05-03 02:58:41,549 | INFO     | 
[2026-05-03 04:59:25] 2026-05-03 02:58:41,549 | INFO     | pilot is running in a VM
[2026-05-03 04:59:25] 2026-05-03 02:58:41,549 | INFO     | architecture information:
[2026-05-03 04:59:25] 2026-05-03 02:58:41,550 | INFO     | executing command: cat /etc/os-release
[2026-05-03 04:59:25] 2026-05-03 02:58:41,578 | INFO     | cat /etc/os-release:
[2026-05-03 04:59:25] NAME="CentOS Linux"
[2026-05-03 04:59:25] VERSION="7 (Core)"
[2026-05-03 04:59:25] ID="centos"
[2026-05-03 04:59:25] ID_LIKE="rhel fedora"
[2026-05-03 04:59:25] VERSION_ID="7"
[2026-05-03 04:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 04:59:25] ANSI_COLOR="0;31"
[2026-05-03 04:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 04:59:25] HOME_URL="https://www.centos.org/"
[2026-05-03 04:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 04:59:25] 
[2026-05-03 04:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 04:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 04:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 04:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 04:59:25] 
[2026-05-03 04:59:25] 2026-05-03 02:58:41,578 | INFO     | ***************************************
[2026-05-03 04:59:25] 2026-05-03 02:58:42,082 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-05-03 04:59:25] 2026-05-03 02:58:42,101 | INFO     | sufficient remaining disk space (16145973248 B)
[2026-05-03 04:59:25] 2026-05-03 02:58:42,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 04:59:25] 2026-05-03 02:58:42,102 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 04:59:25] 2026-05-03 02:58:42,102 | INFO     | update_server=False
[2026-05-03 04:59:25] 2026-05-03 02:58:42,102 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 04:59:25] 2026-05-03 02:58:42,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 04:59:25] 2026-05-03 02:58:42,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 04:59:25] 2026-05-03 02:58:42,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 04:59:25] 2026-05-03 02:58:42,204 | INFO     | aborting loop
[2026-05-03 04:59:25] 2026-05-03 02:58:42,573 | INFO     | all data control threads have been joined
[2026-05-03 04:59:25] 2026-05-03 02:58:42,737 | INFO     | all job control threads have been joined
[2026-05-03 04:59:25] 2026-05-03 02:58:43,106 | INFO     | [job] queue monitor thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,107 | INFO     | [job] retrieve thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,209 | INFO     | [job] job monitor thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,253 | INFO     | [job] validate thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,254 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,411 | INFO     | all payload control threads have been joined
[2026-05-03 04:59:25] 2026-05-03 02:58:43,530 | INFO     | [payload] validate_post thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,578 | INFO     | [data] control thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,609 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,743 | INFO     | [job] control thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,918 | INFO     | [data] copytool_in thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:43,940 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:44,112 | INFO     | [data] copytool_out thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:44,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 04:59:25] 2026-05-03 02:58:44,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:44,419 | INFO     | [payload] control thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:44,439 | INFO     | [payload] failed_post thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:58:48,330 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 04:59:25] 2026-05-03 02:59:11,876 | INFO     | PID=3530186 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 04:59:25] 2026-05-03 02:59:11,876 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 04:59:25] 2026-05-03 02:59:11,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 04:59:25] 2026-05-03 02:59:11,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 04:59:25] 2026-05-03 02:59:19,209 | INFO     | [monitor] cgroup control has ended
[2026-05-03 04:59:25] 2026-05-03 02:59:20,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130599716833088)>', '<ExcThread(monitor, started 130599008331520)>']
[2026-05-03 04:59:25] 2026-05-03 02:59:20,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 04:59:25] 2026-05-03 02:59:20,929 | INFO     | [monitor] control thread has ended
[2026-05-03 04:59:25] 2026-05-03 02:59:25,590 | INFO     | all workflow threads have been joined
[2026-05-03 04:59:25] 2026-05-03 02:59:25,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 04:59:25] 2026-05-03 02:59:25,591 | INFO     | traces error code: 0
[2026-05-03 04:59:25] 2026-05-03 02:59:25,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 04:59:25] 2026-05-03 02:59:25,762 [wrapper] ==== pilot stdout END ====
[2026-05-03 04:59:25] 2026-05-03 02:59:25,766 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 04:59:25] 2026-05-03 02:59:25,769 [wrapper] pilotpid: 3530186
[2026-05-03 04:59:25] 2026-05-03 02:59:25,772 [wrapper] Pilot exit status: 0
[2026-05-03 04:59:25] 2026-05-03 02:59:25,793 [wrapper] pandaids: 7119308577
[2026-05-03 04:59:25] 2026-05-03 02:59:25,824 [wrapper] cleanup supervisor_pilot 3543040 3530187
[2026-05-03 04:59:25] 2026-05-03 02:59:25,828 [wrapper] Test setup, not cleaning
[2026-05-03 04:59:25] 2026-05-03 02:59:25,832 [wrapper] apfmon messages muted
[2026-05-03 04:59:25] 2026-05-03 02:59:25,836 [wrapper] ==== wrapper stdout END ====
[2026-05-03 04:59:25] 2026-05-03 02:59:25,839 [wrapper] ==== wrapper stderr END ====
[2026-05-03 04:59:25]  *** Error codes and diagnostics ***
[2026-05-03 04:59:25]     "exeErrorCode": 0,
[2026-05-03 04:59:25]     "pilotErrorCode": 0,
[2026-05-03 04:59:25]  *** Listing of results directory ***
[2026-05-03 04:59:25] total 392564
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc    683926 Apr 29 19:18 pilot3.tar.gz
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc      5631 Apr 29 19:20 queuedata.json
[2026-05-03 04:59:25] -rwx------ 1 boinc boinc     36322 Apr 29 19:20 runpilot2-wrapper.sh
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc       100 May  2 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 04:59:25] -rwxr-xr-x 1 boinc boinc      7986 May  2 14:51 run_atlas
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc       105 May  2 14:51 job.xml
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc 202225778 May  2 14:51 EVNT.49963768._000005.pool.root.1
[2026-05-03 04:59:25] drwxrwx--x 2 boinc boinc      4096 May  2 14:51 shared
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc    697393 May  2 14:51 input.tar.gz
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc     15667 May  2 14:51 start_atlas.sh
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc      6349 May  2 14:51 init_data.xml
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc         0 May  2 14:51 boinc_setup_complete
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc         0 May  2 14:51 boinc_lockfile
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc      2484 May  2 14:51 pandaJob.out
[2026-05-03 04:59:25] -rw------- 1 boinc boinc        42 May  2 14:51 setup.sh.local
[2026-05-03 04:59:25] -rw------- 1 boinc boinc   1002968 May  2 14:51 agis_schedconf.cvmfs.json
[2026-05-03 04:59:25] -rw------- 1 boinc boinc       414 May  2 14:51 workernode_map.json
[2026-05-03 04:59:25] drwx------ 5 boinc boinc      4096 May  2 14:51 pilot3
[2026-05-03 04:59:25] -rw------- 1 boinc boinc 185264671 May  3 04:57 HITS.49963770._000125.pool.root.1
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc       488 May  3 04:57 boinc_task_state.xml
[2026-05-03 04:59:25] -rw------- 1 boinc boinc      1024 May  3 04:58 memory_monitor_summary.json
[2026-05-03 04:59:25] -rw------- 1 boinc boinc        95 May  3 04:58 pilot_heartbeat.json
[2026-05-03 04:59:25] -rw------- 1 boinc boinc   1508687 May  3 04:58 agis_ddmendpoints.agis.ALL.json
[2026-05-03 04:59:25] -rw------- 1 boinc boinc    618005 May  3 04:58 log.49963770._000125.job.log.tgz.1
[2026-05-03 04:59:25] -rw------- 1 boinc boinc      6344 May  3 04:58 heartbeat_new.json
[2026-05-03 04:59:25] -rw------- 1 boinc boinc      6235 May  3 04:58 heartbeat.json
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc        28 May  3 04:59 wrapper_checkpoint.txt
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc      8192 May  3 04:59 boinc_mmap_file
[2026-05-03 04:59:25] -rw------- 1 boinc boinc      4816 May  3 04:59 pilotlog.txt
[2026-05-03 04:59:25] -rw------- 1 boinc boinc   4559595 May  3 04:59 log.49963770._000125.job.log.1
[2026-05-03 04:59:25] -rw------- 1 boinc boinc       357 May  3 04:59 output.list
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc       410 May  3 04:59 runtime_log
[2026-05-03 04:59:25] -rw------- 1 boinc boinc   5191680 May  3 04:59 result.tar.gz
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc      8997 May  3 04:59 runtime_log.err
[2026-05-03 04:59:25] -rw------- 1 boinc boinc       659 May  3 04:59 3dee2fed5941.diag
[2026-05-03 04:59:25] -rw-r--r-- 1 boinc boinc     20916 May  3 04:59 stderr.txt
[2026-05-03 04:59:25] HITS file was successfully produced:
[2026-05-03 04:59:25] -rw------- 1 boinc boinc 185264671 May  3 04:57 shared/HITS.pool.root.1
[2026-05-03 04:59:25]  *** Contents of shared directory: ***
[2026-05-03 04:59:25] total 384192
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc 202225778 May  2 14:51 ATLAS.root_0
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc    697393 May  2 14:51 input.tar.gz
[2026-05-03 04:59:25] -rw-r--r-- 2 boinc boinc     15667 May  2 14:51 start_atlas.sh
[2026-05-03 04:59:25] -rw------- 1 boinc boinc 185264671 May  3 04:57 HITS.pool.root.1
[2026-05-03 04:59:25] -rw------- 1 boinc boinc   5191680 May  3 04:59 result.tar.gz
04:59:27 (3526150): run_atlas exited; CPU time 98954.275921
04:59:27 (3526150): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN