Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:46:37 (1951491): wrapper (7.7.26015): starting
16:46:37 (1951491): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 16:46:37] Arguments: --nthreads 8
[2026-04-29 16:46:37] Threads: 8
[2026-04-29 16:46:37] Checking for CVMFS
[2026-04-29 16:46:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 16:46:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 16:46:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 16:46:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 16:46:39] 2.13.3.0 4156 155399 1025692 159018 1 770 16540080 32935937 63088 16776704 0 1405059380 99.767 826360106 27115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-29 16:46:39] CVMFS is ok
[2026-04-29 16:46:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 16:46:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 16:46:39] Further information can be found at the LHC@home message board.
[2026-04-29 16:46:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 16:46:39] Checking for apptainer binary...
[2026-04-29 16:46:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 16:46:39] Running /usr/bin/apptainer --version
[2026-04-29 16:46:40] apptainer version 1.4.5-3.el9
[2026-04-29 16:46:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 16:46:40] lc-10-10.aglt2.org
[2026-04-29 16:46:40] apptainer works
[2026-04-29 16:46:40] Set ATHENA_PROC_NUMBER=8
[2026-04-29 16:46:40] Set ATHENA_CORE_NUMBER=8
[2026-04-29 16:46:40] Starting ATLAS job with PandaID=7118371753
[2026-04-29 16:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 22:33:22]  *** The last 200 lines of the pilot log: ***
[2026-04-29 22:33:22] 2026-04-30 02:32:40,426 | INFO     | monitor loop #1154: job 0:7118371753 is in state 'finished'
[2026-04-29 22:33:22] 2026-04-30 02:32:40,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-29 22:33:22] 2026-04-30 02:32:40,549 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-29 22:33:22] 2026-04-30 02:32:42,651 | INFO     | job 7118371753 has state=finished
[2026-04-29 22:33:22] 2026-04-30 02:32:42,651 | INFO     | preparing for final server update for job 7118371753 in state='finished'
[2026-04-29 22:33:22] 2026-04-30 02:32:42,651 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7118371753/jobReport.json
[2026-04-29 22:33:22] 2026-04-30 02:32:42,654 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-29 22:33:22] 2026-04-30 02:32:42,654 | INFO     | this job has now completed (state=finished)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,654 | INFO     | log transfer has been attempted: DONE
[2026-04-29 22:33:22] 2026-04-30 02:32:42,654 | INFO     | job 7118371753 has finished - writing final server update
[2026-04-29 22:33:22] 2026-04-30 02:32:42,667 | INFO     | total number of processed events: 400 (read)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,733 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7118371753/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,734 | INFO     | extracted standard info from prmon json
[2026-04-29 22:33:22] 2026-04-30 02:32:42,734 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 22:33:22] 2026-04-30 02:32:42,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 22:33:22] 2026-04-30 02:32:42,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 22:33:22] 2026-04-30 02:32:42,760 | INFO     | fitting pss+swap vs Time
[2026-04-29 22:33:22] 2026-04-30 02:32:42,761 | INFO     | sum of square deviations: 11867454298.053371
[2026-04-29 22:33:22] 2026-04-30 02:32:42,777 | INFO     | sum of deviations: 91117426322.08318
[2026-04-29 22:33:22] 2026-04-30 02:32:42,777 | INFO     | mean x (centered): 0.0
[2026-04-29 22:33:22] 2026-04-30 02:32:42,777 | INFO     | mean y: 2498428.952522255
[2026-04-29 22:33:22] 2026-04-30 02:32:42,777 | INFO     | intersect: 2498428.952522255
[2026-04-29 22:33:22] 2026-04-30 02:32:42,778 | INFO     | chi2: 4.061106750387687
[2026-04-29 22:33:22] 2026-04-30 02:32:42,778 | INFO     | sum of square deviations: 11347042862.722857
[2026-04-29 22:33:22] 2026-04-30 02:32:42,793 | INFO     | sum of deviations: 110911249054.01222
[2026-04-29 22:33:22] 2026-04-30 02:32:42,793 | INFO     | mean x (centered): 0.0
[2026-04-29 22:33:22] 2026-04-30 02:32:42,793 | INFO     | mean y: 2504153.9126506024
[2026-04-29 22:33:22] 2026-04-30 02:32:42,793 | INFO     | intersect: 2504153.9126506024
[2026-04-29 22:33:22] 2026-04-30 02:32:42,794 | INFO     | chi2: 3.3879501575515807
[2026-04-29 22:33:22] 2026-04-30 02:32:42,794 | INFO     | current chi2=3.3879501575515807 (change=16.57569313517416 %)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,794 | INFO     | right removable region: 331
[2026-04-29 22:33:22] 2026-04-30 02:32:42,807 | INFO     | sum of square deviations: 11346990402.722857
[2026-04-29 22:33:22] 2026-04-30 02:32:42,810 | INFO     | sum of deviations: -5535216453.77109
[2026-04-29 22:33:22] 2026-04-30 02:32:42,823 | INFO     | mean x (centered): 0.0
[2026-04-29 22:33:22] 2026-04-30 02:32:42,823 | INFO     | mean y: 2526683.0903614457
[2026-04-29 22:33:22] 2026-04-30 02:32:42,823 | INFO     | intersect: 2526683.0903614457
[2026-04-29 22:33:22] 2026-04-30 02:32:42,824 | INFO     | chi2: 0.8873536772203396
[2026-04-29 22:33:22] 2026-04-30 02:32:42,824 | INFO     | current chi2=0.8873536772203396 (change=78.14995439025016 %)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,824 | INFO     | sum of square deviations: 10841968657.38226
[2026-04-29 22:33:22] 2026-04-30 02:32:42,839 | INFO     | sum of deviations: -22349562343.192654
[2026-04-29 22:33:22] 2026-04-30 02:32:42,839 | INFO     | mean x (centered): 0.0
[2026-04-29 22:33:22] 2026-04-30 02:32:42,840 | INFO     | mean y: 2531749.339449541
[2026-04-29 22:33:22] 2026-04-30 02:32:42,840 | INFO     | intersect: 2531749.339449541
[2026-04-29 22:33:22] 2026-04-30 02:32:42,840 | INFO     | chi2: 0.7901841194815094
[2026-04-29 22:33:22] 2026-04-30 02:32:42,840 | INFO     | current chi2=0.7901841194815094 (change=10.950487977152095 %)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,841 | INFO     | left removable region: 10
[2026-04-29 22:33:22] 2026-04-30 02:32:42,841 | INFO     | sum of square deviations: 10256061704.959513
[2026-04-29 22:33:22] 2026-04-30 02:32:42,856 | INFO     | sum of deviations: -1509509620.8784993
[2026-04-29 22:33:22] 2026-04-30 02:32:42,856 | INFO     | mean x (centered): 0.0
[2026-04-29 22:33:22] 2026-04-30 02:32:42,856 | INFO     | mean y: 2538158.196261682
[2026-04-29 22:33:22] 2026-04-30 02:32:42,856 | INFO     | intersect: 2538158.196261682
[2026-04-29 22:33:22] 2026-04-30 02:32:42,857 | INFO     | chi2: 0.09283665683587039
[2026-04-29 22:33:22] 2026-04-30 02:32:42,857 | INFO     | current memory leak: -0.15 B/s (using 321 data points, chi2=0.09)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | could have reported an average CPU frequency of 2802 MHz (15 samples)
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | ..............................
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . Timing measurements:
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . get job = 0 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . initial setup = 41 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . payload setup = 80 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . stage-in = 0 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . payload execution = 20532 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . stage-out = 6 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | . log creation = 0 s
[2026-04-29 22:33:22] 2026-04-30 02:32:42,858 | INFO     | ..............................
[2026-04-29 22:33:22] 2026-04-30 02:32:43,247 | INFO     | 
[2026-04-29 22:33:22] 2026-04-30 02:32:43,247 | INFO     | job summary report
[2026-04-29 22:33:22] 2026-04-30 02:32:43,247 | INFO     | --------------------------------------------------
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | PanDA job id: 7118371753
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | task id: 49863869
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | errors: (none)
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | pilot state: finished 
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | transexitcode: 0
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | exeerrorcode: 0
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | exeerrordiag: 
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | exitcode: 0
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | exitmsg: OK
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | cpuconsumptiontime: 58624 s
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | nevents: 400
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | neventsw: 0
[2026-04-29 22:33:22] 2026-04-30 02:32:43,248 | INFO     | pid: 2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | pgrp: 2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | corecount: 8
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | event service: False
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | sizes: {0: 2280004, 1: 2280689, 2: 2280717, 3: 2280717, 4: 2282546, 5: 2282546, 16: 2282730, 20617: 2316070, 20624: 2325068, 20625: 2325124, 20628: 2325318}
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | --------------------------------------------------
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | 
[2026-04-29 22:33:22] 2026-04-30 02:32:43,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-29 22:33:22] 2026-04-30 02:32:43,375 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | job 7118371753 has completed (purged errors)
[2026-04-29 22:33:22] 2026-04-30 02:32:43,377 | INFO     | overall cleanup function is called
[2026-04-29 22:33:22] 2026-04-30 02:32:44,391 | INFO     | --- collectZombieJob: --- 10, [2002421]
[2026-04-29 22:33:22] 2026-04-30 02:32:44,391 | INFO     | zombie collector waiting for pid 2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:44,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 22:33:22] 2026-04-30 02:32:44,391 | INFO     | collected zombie processes
[2026-04-29 22:33:22] 2026-04-30 02:32:44,391 | INFO     | will attempt to kill all subprocesses of pid=2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:46,437 | INFO     | process IDs to be killed: [2002421] (in reverse order)
[2026-04-29 22:33:22] 2026-04-30 02:32:46,963 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 22:33:22] 2026-04-30 02:32:46,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 22:33:22] 2026-04-30 02:32:47,038 | INFO     | did not find any defunct processes belonging to 2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:47,126 | INFO     | did not find any defunct processes belonging to 2002421
[2026-04-29 22:33:22] 2026-04-30 02:32:47,126 | INFO     | Ready for new job
[2026-04-29 22:33:22] 2026-04-30 02:32:47,140 | INFO     | ***************************************
[2026-04-29 22:33:22] 2026-04-30 02:32:47,141 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 22:33:22] 2026-04-30 02:32:47,141 | INFO     | ***************************************
[2026-04-29 22:33:22] 2026-04-30 02:32:47,141 | INFO     | 
[2026-04-29 22:33:22] 2026-04-30 02:32:47,158 | INFO     | architecture information:
[2026-04-29 22:33:22] 2026-04-30 02:32:47,171 | INFO     | executing command: cat /etc/os-release
[2026-04-29 22:33:22] 2026-04-30 02:32:47,339 | INFO     | cat /etc/os-release:
[2026-04-29 22:33:22] NAME="CentOS Linux"
[2026-04-29 22:33:22] VERSION="7 (Core)"
[2026-04-29 22:33:22] ID="centos"
[2026-04-29 22:33:22] ID_LIKE="rhel fedora"
[2026-04-29 22:33:22] VERSION_ID="7"
[2026-04-29 22:33:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 22:33:22] ANSI_COLOR="0;31"
[2026-04-29 22:33:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 22:33:22] HOME_URL="https://www.centos.org/"
[2026-04-29 22:33:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 22:33:22] 
[2026-04-29 22:33:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 22:33:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 22:33:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 22:33:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 22:33:22] 
[2026-04-29 22:33:22] 2026-04-30 02:32:47,339 | INFO     | ***************************************
[2026-04-29 22:33:22] 2026-04-30 02:32:47,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-29 22:33:22] 2026-04-30 02:32:48,004 | INFO     | sufficient remaining disk space (93132423168 B)
[2026-04-29 22:33:22] 2026-04-30 02:32:48,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 22:33:22] 2026-04-30 02:32:48,005 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 22:33:22] 2026-04-30 02:32:48,005 | INFO     | update_server=False
[2026-04-29 22:33:22] 2026-04-30 02:32:48,005 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 22:33:22] 2026-04-30 02:32:48,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 22:33:22] 2026-04-30 02:32:48,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 22:33:22] 2026-04-30 02:32:48,690 | INFO     | all data control threads have been joined
[2026-04-29 22:33:22] 2026-04-30 02:32:48,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 22:33:22] 2026-04-30 02:32:48,999 | INFO     | aborting loop
[2026-04-29 22:33:22] 2026-04-30 02:32:49,012 | INFO     | [job] retrieve thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:49,296 | INFO     | all payload control threads have been joined
[2026-04-29 22:33:22] 2026-04-30 02:32:49,300 | INFO     | [job] queue monitor thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:49,601 | INFO     | all job control threads have been joined
[2026-04-29 22:33:22] 2026-04-30 02:32:49,698 | INFO     | [data] control thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:49,776 | INFO     | [payload] failed_post thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:49,857 | INFO     | [payload] validate_post thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,007 | INFO     | [job] job monitor thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,017 | INFO     | [data] copytool_out thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,074 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,074 | INFO     | [data] copytool_in thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,302 | INFO     | [payload] control thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,376 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,376 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,437 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,441 | INFO     | [job] validate thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:50,607 | INFO     | [job] control thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:32:51,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 22:33:22] 2026-04-30 02:32:54,840 [wrapper] supervise_pilot (15 min periods counter: 24)
[2026-04-29 22:33:22] 2026-04-30 02:32:55,445 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 22:33:22] 2026-04-30 02:33:14,742 | INFO     | [monitor] cgroup control has ended
[2026-04-29 22:33:22] 2026-04-30 02:33:16,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037057701696)>', '<ExcThread(monitor, started 140036695631616)>']
[2026-04-29 22:33:22] 2026-04-30 02:33:18,055 | INFO     | PID=1974527 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 22:33:22] 2026-04-30 02:33:18,055 | INFO     | .. there are 62 such processes running
[2026-04-29 22:33:22] 2026-04-30 02:33:18,055 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 22:33:22] 2026-04-30 02:33:18,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 22:33:22] 2026-04-30 02:33:18,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 22:33:22] 2026-04-30 02:33:18,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 22:33:22] 2026-04-30 02:33:18,056 | INFO     | [monitor] control thread has ended
[2026-04-29 22:33:22] 2026-04-30 02:33:21,694 | INFO     | all workflow threads have been joined
[2026-04-29 22:33:22] 2026-04-30 02:33:21,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 22:33:22] 2026-04-30 02:33:21,694 | INFO     | traces error code: 0
[2026-04-29 22:33:22] 2026-04-30 02:33:21,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 22:33:22] 2026-04-30 02:33:22,289 [wrapper] ==== pilot stdout END ====
[2026-04-29 22:33:22] 2026-04-30 02:33:22,301 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 22:33:22] 2026-04-30 02:33:22,318 [wrapper] pilotpid: 1974527
[2026-04-29 22:33:22] 2026-04-30 02:33:22,336 [wrapper] Pilot exit status: 0
[2026-04-29 22:33:22] 2026-04-30 02:33:22,381 [wrapper] pandaids: 7118371753
[2026-04-29 22:33:22] 2026-04-30 02:33:22,513 [wrapper] cleanup supervisor_pilot 3714375 1974528
[2026-04-29 22:33:22] 2026-04-30 02:33:22,516 [wrapper] Test setup, not cleaning
[2026-04-29 22:33:22] 2026-04-30 02:33:22,521 [wrapper] apfmon messages muted
[2026-04-29 22:33:22] 2026-04-30 02:33:22,526 [wrapper] ==== wrapper stdout END ====
[2026-04-29 22:33:22] 2026-04-30 02:33:22,533 [wrapper] ==== wrapper stderr END ====
[2026-04-29 22:33:22]  *** Error codes and diagnostics ***
[2026-04-29 22:33:22]     "exeErrorCode": 0,
[2026-04-29 22:33:22]     "pilotErrorCode": 0,
[2026-04-29 22:33:22]  *** Listing of results directory ***
[2026-04-29 22:33:22] total 465080
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas    687764 Apr 24 09:56 pilot3.tar.gz
[2026-04-29 22:33:22] -rwx------. 1 boincer umatlas     36322 Apr 29 00:13 runpilot2-wrapper.sh
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas      5631 Apr 29 12:59 queuedata.json
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas       100 Apr 29 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 22:33:22] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 16:46 run_atlas
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas       105 Apr 29 16:46 job.xml
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas 256590909 Apr 29 16:46 EVNT.49863867._000096.pool.root.1
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 16:46 start_atlas.sh
[2026-04-29 22:33:22] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 16:46 shared
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas    700376 Apr 29 16:46 input.tar.gz
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas         0 Apr 29 16:46 boinc_lockfile
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas      2574 Apr 29 16:46 pandaJob.out
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas        57 Apr 29 16:46 setup.sh.local
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas   1001909 Apr 29 16:47 agis_schedconf.cvmfs.json
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas       442 Apr 29 16:48 workernode_map.json
[2026-04-29 22:33:22] drwx------. 5 boincer umatlas      4096 Apr 29 16:48 pilot3
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas      6783 Apr 29 22:27 init_data.xml
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas 211463326 Apr 29 22:31 HITS.49863869._002408.pool.root.1
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas       488 Apr 29 22:31 boinc_task_state.xml
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas        95 Apr 29 22:32 pilot_heartbeat.json
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas      1047 Apr 29 22:32 memory_monitor_summary.json
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas   1512704 Apr 29 22:32 agis_ddmendpoints.agis.ALL.json
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas    449709 Apr 29 22:32 log.49863869._002408.job.log.tgz.1
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas      6413 Apr 29 22:32 heartbeat_new.json
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas      6304 Apr 29 22:32 heartbeat.json
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas        28 Apr 29 22:32 wrapper_checkpoint.txt
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 22:32 boinc_mmap_file
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas      4823 Apr 29 22:33 pilotlog.txt
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas   1567651 Apr 29 22:33 log.49863869._002408.job.log.1
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas       357 Apr 29 22:33 output.list
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas       410 Apr 29 22:33 runtime_log
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas   2037760 Apr 29 22:33 result.tar.gz
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas      8965 Apr 29 22:33 runtime_log.err
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas       657 Apr 29 22:33 856fc13e42a3.diag
[2026-04-29 22:33:22] -rw-r--r--. 1 boincer umatlas     21307 Apr 29 22:33 stderr.txt
[2026-04-29 22:33:22] HITS file was successfully produced:
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas 211463326 Apr 29 22:31 shared/HITS.pool.root.1
[2026-04-29 22:33:22]  *** Contents of shared directory: ***
[2026-04-29 22:33:22] total 459788
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas 256590909 Apr 29 16:46 ATLAS.root_0
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 16:46 start_atlas.sh
[2026-04-29 22:33:22] -rw-r--r--. 2 boincer umatlas    700376 Apr 29 16:46 input.tar.gz
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas 211463326 Apr 29 22:31 HITS.pool.root.1
[2026-04-29 22:33:22] -rw-------. 1 boincer umatlas   2037760 Apr 29 22:33 result.tar.gz
22:33:24 (1951491): run_atlas exited; CPU time 59950.602594
22:33:24 (1951491): called boinc_finish(0)

</stderr_txt>
]]>

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