Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:27 (2740752): wrapper (7.7.26015): starting
10:08:27 (2740752): wrapper: running run_atlas (--nthreads 9)
[2026-04-29 10:08:27] Arguments: --nthreads 9
[2026-04-29 10:08:27] Threads: 9
[2026-04-29 10:08:27] Checking for CVMFS
[2026-04-29 10:08:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 10:08:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 10:08:27] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 10:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 10:08:28] 2.13.3.0 6634 180788 396592 159008 3 59 23188791 40960001 14154 16776704 0 420685363 99.672 373727042 40542 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-29 10:08:28] CVMFS is ok
[2026-04-29 10:08:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 10:08:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 10:08:28] Further information can be found at the LHC@home message board.
[2026-04-29 10:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 10:08:28] Checking for apptainer binary...
[2026-04-29 10:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 10:08:28] Running /usr/bin/apptainer --version
[2026-04-29 10:08:28] apptainer version 1.4.5-3.el9
[2026-04-29 10:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 10:08:28] c-206-37.aglt2.org
[2026-04-29 10:08:28] apptainer works
[2026-04-29 10:08:28] Set ATHENA_PROC_NUMBER=9
[2026-04-29 10:08:28] Set ATHENA_CORE_NUMBER=9
[2026-04-29 10:08:29] Starting ATLAS job with PandaID=7114611324
[2026-04-29 10:08:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 17:38:34]  *** The last 200 lines of the pilot log: ***
[2026-04-29 17:38:34] 2026-04-29 21:37:56,411 | INFO     | job 7114611324 has finished - writing final server update
[2026-04-29 17:38:34] 2026-04-29 21:37:56,412 | INFO     | total number of processed events: 400 (read)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,515 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7114611324/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,515 | INFO     | extracted standard info from prmon json
[2026-04-29 17:38:34] 2026-04-29 21:37:56,515 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 17:38:34] 2026-04-29 21:37:56,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 17:38:34] 2026-04-29 21:37:56,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 17:38:34] 2026-04-29 21:37:56,563 | INFO     | fitting pss+swap vs Time
[2026-04-29 17:38:34] 2026-04-29 21:37:56,563 | INFO     | sum of square deviations: 26415347371.543175
[2026-04-29 17:38:34] 2026-04-29 21:37:56,583 | INFO     | sum of deviations: 15680052713.811401
[2026-04-29 17:38:34] 2026-04-29 21:37:56,583 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,583 | INFO     | mean y: 2565679.3022727272
[2026-04-29 17:38:34] 2026-04-29 21:37:56,583 | INFO     | intersect: 2565679.3022727272
[2026-04-29 17:38:34] 2026-04-29 21:37:56,610 | INFO     | chi2: 2.1777203644387293
[2026-04-29 17:38:34] 2026-04-29 21:37:56,611 | INFO     | sum of square deviations: 25524925788.170128
[2026-04-29 17:38:34] 2026-04-29 21:37:56,645 | INFO     | sum of deviations: 44630094922.46212
[2026-04-29 17:38:34] 2026-04-29 21:37:56,645 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,645 | INFO     | mean y: 2570592.1862068963
[2026-04-29 17:38:34] 2026-04-29 21:37:56,645 | INFO     | intersect: 2570592.1862068963
[2026-04-29 17:38:34] 2026-04-29 21:37:56,645 | INFO     | chi2: 1.4420223798728051
[2026-04-29 17:38:34] 2026-04-29 21:37:56,646 | INFO     | current chi2=1.4420223798728051 (change=33.78294094042409 %)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,646 | INFO     | sum of square deviations: 24654788994.706905
[2026-04-29 17:38:34] 2026-04-29 21:37:56,681 | INFO     | sum of deviations: 43871133675.85584
[2026-04-29 17:38:34] 2026-04-29 21:37:56,681 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,681 | INFO     | mean y: 2570459.1581395348
[2026-04-29 17:38:34] 2026-04-29 21:37:56,681 | INFO     | intersect: 2570459.1581395348
[2026-04-29 17:38:34] 2026-04-29 21:37:56,682 | INFO     | chi2: 1.44221372986306
[2026-04-29 17:38:34] 2026-04-29 21:37:56,682 | INFO     | current chi2=1.44221372986306 (change=-0.013269557596721078 %)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,682 | INFO     | right removable region: 429
[2026-04-29 17:38:34] 2026-04-29 21:37:56,682 | INFO     | sum of square deviations: 25525008755.779305
[2026-04-29 17:38:34] 2026-04-29 21:37:56,715 | INFO     | sum of deviations: -47286649568.48281
[2026-04-29 17:38:34] 2026-04-29 21:37:56,715 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,715 | INFO     | mean y: 2576400.5057471264
[2026-04-29 17:38:34] 2026-04-29 21:37:56,715 | INFO     | intersect: 2576400.5057471264
[2026-04-29 17:38:34] 2026-04-29 21:37:56,749 | INFO     | chi2: 0.8370143823966135
[2026-04-29 17:38:34] 2026-04-29 21:37:56,749 | INFO     | current chi2=0.8370143823966135 (change=61.564652833085866 %)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,750 | INFO     | sum of square deviations: 24654903077.49769
[2026-04-29 17:38:34] 2026-04-29 21:37:56,786 | INFO     | sum of deviations: -60448527027.293015
[2026-04-29 17:38:34] 2026-04-29 21:37:56,786 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,787 | INFO     | mean y: 2578702.6069767443
[2026-04-29 17:38:34] 2026-04-29 21:37:56,787 | INFO     | intersect: 2578702.6069767443
[2026-04-29 17:38:34] 2026-04-29 21:37:56,787 | INFO     | chi2: 0.7684094622422168
[2026-04-29 17:38:34] 2026-04-29 21:37:56,787 | INFO     | current chi2=0.7684094622422168 (change=8.19638486473327 %)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,787 | INFO     | left removable region: 10
[2026-04-29 17:38:34] 2026-04-29 21:37:56,788 | INFO     | sum of square deviations: 22810580957.918716
[2026-04-29 17:38:34] 2026-04-29 21:37:56,819 | INFO     | sum of deviations: -31152316051.097847
[2026-04-29 17:38:34] 2026-04-29 21:37:56,820 | INFO     | mean x (centered): 0.0
[2026-04-29 17:38:34] 2026-04-29 21:37:56,820 | INFO     | mean y: 2583910.801909308
[2026-04-29 17:38:34] 2026-04-29 21:37:56,820 | INFO     | intersect: 2583910.801909308
[2026-04-29 17:38:34] 2026-04-29 21:37:56,820 | INFO     | chi2: 0.02361181315103302
[2026-04-29 17:38:34] 2026-04-29 21:37:56,820 | INFO     | current memory leak: -1.37 B/s (using 419 data points, chi2=0.02)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | could have reported an average CPU frequency of 3290 MHz (18 samples)
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | ..............................
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | . Timing measurements:
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | . get job = 0 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | . initial setup = 23 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,821 | INFO     | . payload setup = 30 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,852 | INFO     | . stage-in = 0 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,852 | INFO     | . payload execution = 26851 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,852 | INFO     | . stage-out = 3 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,852 | INFO     | . log creation = 0 s
[2026-04-29 17:38:34] 2026-04-29 21:37:56,852 | INFO     | ..............................
[2026-04-29 17:38:34] 2026-04-29 21:37:57,150 | INFO     | 
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | job summary report
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | --------------------------------------------------
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | PanDA job id: 7114611324
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | task id: 49178102
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | errors: (none)
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | pilot state: finished 
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | transexitcode: 0
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | exeerrorcode: 0
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | exeerrordiag: 
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | exitcode: 0
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | exitmsg: OK
[2026-04-29 17:38:34] 2026-04-29 21:37:57,165 | INFO     | cpuconsumptiontime: 90004 s
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | nevents: 400
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | neventsw: 0
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | pid: 2752342
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | pgrp: 2752342
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | corecount: 9
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | event service: False
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | sizes: {0: 2280727, 1: 2280811, 2: 2281038, 3: 2282640, 13: 2282668, 26885: 2319430, 26886: 2319557, 26890: 2328611, 26892: 2328667, 26893: 2328861}
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | --------------------------------------------------
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | 
[2026-04-29 17:38:34] 2026-04-29 21:37:57,166 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-29 17:38:34] 2026-04-29 21:37:57,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,403 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 17:38:34] 2026-04-29 21:37:57,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 17:38:34] 2026-04-29 21:37:57,404 | INFO     | job 7114611324 has completed (purged errors)
[2026-04-29 17:38:34] 2026-04-29 21:37:57,404 | INFO     | overall cleanup function is called
[2026-04-29 17:38:34] 2026-04-29 21:37:58,442 | INFO     | --- collectZombieJob: --- 10, [2752342]
[2026-04-29 17:38:34] 2026-04-29 21:37:58,442 | INFO     | zombie collector waiting for pid 2752342
[2026-04-29 17:38:34] 2026-04-29 21:37:58,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 17:38:34] 2026-04-29 21:37:58,442 | INFO     | collected zombie processes
[2026-04-29 17:38:34] 2026-04-29 21:37:58,442 | INFO     | will attempt to kill all subprocesses of pid=2752342
[2026-04-29 17:38:34] 2026-04-29 21:37:59,655 | INFO     | PID=2744984 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 17:38:34] 2026-04-29 21:37:59,655 | INFO     | .. there are 13 such processes running
[2026-04-29 17:38:34] 2026-04-29 21:38:00,119 | INFO     | process IDs to be killed: [2752342] (in reverse order)
[2026-04-29 17:38:34] 2026-04-29 21:38:01,078 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 17:38:34] 2026-04-29 21:38:01,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 17:38:34] 2026-04-29 21:38:01,092 | INFO     | did not find any defunct processes belonging to 2752342
[2026-04-29 17:38:34] 2026-04-29 21:38:01,105 | INFO     | did not find any defunct processes belonging to 2752342
[2026-04-29 17:38:34] 2026-04-29 21:38:01,106 | INFO     | Ready for new job
[2026-04-29 17:38:34] 2026-04-29 21:38:01,109 | INFO     | ***************************************
[2026-04-29 17:38:34] 2026-04-29 21:38:01,110 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 17:38:34] 2026-04-29 21:38:01,110 | INFO     | ***************************************
[2026-04-29 17:38:34] 2026-04-29 21:38:01,110 | INFO     | 
[2026-04-29 17:38:34] 2026-04-29 21:38:01,142 | INFO     | architecture information:
[2026-04-29 17:38:34] 2026-04-29 21:38:01,150 | INFO     | executing command: cat /etc/os-release
[2026-04-29 17:38:34] 2026-04-29 21:38:01,271 | INFO     | cat /etc/os-release:
[2026-04-29 17:38:34] NAME="CentOS Linux"
[2026-04-29 17:38:34] VERSION="7 (Core)"
[2026-04-29 17:38:34] ID="centos"
[2026-04-29 17:38:34] ID_LIKE="rhel fedora"
[2026-04-29 17:38:34] VERSION_ID="7"
[2026-04-29 17:38:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 17:38:34] ANSI_COLOR="0;31"
[2026-04-29 17:38:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 17:38:34] HOME_URL="https://www.centos.org/"
[2026-04-29 17:38:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 17:38:34] 
[2026-04-29 17:38:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 17:38:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 17:38:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 17:38:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 17:38:34] 
[2026-04-29 17:38:34] 2026-04-29 21:38:01,271 | INFO     | ***************************************
[2026-04-29 17:38:34] 2026-04-29 21:38:01,775 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-29 17:38:34] 2026-04-29 21:38:01,867 | INFO     | sufficient remaining disk space (83667976192 B)
[2026-04-29 17:38:34] 2026-04-29 21:38:01,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 17:38:34] 2026-04-29 21:38:01,867 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 17:38:34] 2026-04-29 21:38:01,868 | INFO     | update_server=False
[2026-04-29 17:38:34] 2026-04-29 21:38:01,868 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 17:38:34] 2026-04-29 21:38:02,029 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-29 17:38:34] 2026-04-29 21:38:02,029 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-29 17:38:34] 2026-04-29 21:38:02,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:38:34] 2026-04-29 21:38:02,029 | INFO     | will abort loop
[2026-04-29 17:38:34] 2026-04-29 21:38:02,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:38:34] 2026-04-29 21:38:02,331 | INFO     | all data control threads have been joined
[2026-04-29 17:38:34] 2026-04-29 21:38:02,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 17:38:34] 2026-04-29 21:38:02,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 17:38:34] 2026-04-29 21:38:02,629 | INFO     | all payload control threads have been joined
[2026-04-29 17:38:34] 2026-04-29 21:38:02,874 | INFO     | [job] retrieve thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:02,877 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,040 | INFO     | [job] job monitor thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,130 | INFO     | [payload] validate_post thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,169 | INFO     | all job control threads have been joined
[2026-04-29 17:38:34] 2026-04-29 21:38:03,196 | INFO     | [job] queue monitor thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,323 | INFO     | [job] validate thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,328 | INFO     | [data] copytool_in thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,340 | INFO     | [data] control thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,477 | INFO     | [payload] failed_post thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,535 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,635 | INFO     | [payload] control thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:03,836 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:04,103 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:04,195 | INFO     | [job] control thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:04,512 | INFO     | [data] copytool_out thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:06,520 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 17:38:34] 2026-04-29 21:38:17,313 | INFO     | [monitor] cgroup control has ended
[2026-04-29 17:38:34] 2026-04-29 21:38:17,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478543902528)>', '<ExcThread(monitor, started 140478204847872)>']
[2026-04-29 17:38:34] 2026-04-29 21:38:22,816 | INFO     | all workflow threads have been joined
[2026-04-29 17:38:34] 2026-04-29 21:38:22,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 17:38:34] 2026-04-29 21:38:22,816 | INFO     | traces error code: 0
[2026-04-29 17:38:34] 2026-04-29 21:38:22,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 17:38:34] 2026-04-29 21:38:33,180 | INFO     | PID=2744984 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 17:38:34] 2026-04-29 21:38:33,181 | INFO     | .. there are 13 such processes running
[2026-04-29 17:38:34] 2026-04-29 21:38:33,190 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 17:38:34] 2026-04-29 21:38:33,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 17:38:34] 2026-04-29 21:38:33,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 17:38:34] 2026-04-29 21:38:33,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 17:38:34] 2026-04-29 21:38:33,190 | INFO     | [monitor] control thread has ended
[2026-04-29 17:38:34] 2026-04-29 21:38:33,373 [wrapper] ==== pilot stdout END ====
[2026-04-29 17:38:34] 2026-04-29 21:38:33,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 17:38:34] 2026-04-29 21:38:33,423 [wrapper] pilotpid: 2744984
[2026-04-29 17:38:34] 2026-04-29 21:38:33,475 [wrapper] Pilot exit status: 0
[2026-04-29 17:38:34] 2026-04-29 21:38:33,519 [wrapper] pandaids: 7114611324
[2026-04-29 17:38:34] 2026-04-29 21:38:33,596 [wrapper] cleanup supervisor_pilot 3530750 2744985
[2026-04-29 17:38:34] 2026-04-29 21:38:33,599 [wrapper] Test setup, not cleaning
[2026-04-29 17:38:34] 2026-04-29 21:38:33,602 [wrapper] apfmon messages muted
[2026-04-29 17:38:34] 2026-04-29 21:38:33,604 [wrapper] ==== wrapper stdout END ====
[2026-04-29 17:38:34] 2026-04-29 21:38:33,606 [wrapper] ==== wrapper stderr END ====
[2026-04-29 17:38:34]  *** Error codes and diagnostics ***
[2026-04-29 17:38:34]     "exeErrorCode": 0,
[2026-04-29 17:38:34]     "pilotErrorCode": 0,
[2026-04-29 17:38:34]  *** Listing of results directory ***
[2026-04-29 17:38:34] total 470472
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 07:58 pilot3.tar.gz
[2026-04-29 17:38:34] -rwx------. 1 boincer umatlas     36322 Apr 25 08:11 runpilot2-wrapper.sh
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 08:18 queuedata.json
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas       100 Apr 29 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 17:38:34] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 10:08 run_atlas
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas       105 Apr 29 10:08 job.xml
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas 235343449 Apr 29 10:08 EVNT.49128073._000005.pool.root.1
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 10:08 start_atlas.sh
[2026-04-29 17:38:34] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 10:08 shared
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas    697431 Apr 29 10:08 input.tar.gz
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas         0 Apr 29 10:08 boinc_lockfile
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas      2631 Apr 29 10:08 pandaJob.out
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas        57 Apr 29 10:08 setup.sh.local
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas   1001891 Apr 29 10:09 agis_schedconf.cvmfs.json
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas       430 Apr 29 10:09 workernode_map.json
[2026-04-29 17:38:34] drwx------. 5 boincer umatlas      4096 Apr 29 10:09 pilot3
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas      6825 Apr 29 17:28 init_data.xml
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas 236424643 Apr 29 17:36 HITS.49178102._000163.pool.root.1
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas       488 Apr 29 17:36 boinc_task_state.xml
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas      1058 Apr 29 17:37 memory_monitor_summary.json
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas   1512704 Apr 29 17:37 agis_ddmendpoints.agis.ALL.json
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas    537203 Apr 29 17:37 log.49178102._000163.job.log.tgz.1
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas      6357 Apr 29 17:37 heartbeat_new.json
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas      6248 Apr 29 17:37 heartbeat.json
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 17:38 boinc_mmap_file
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas        28 Apr 29 17:38 wrapper_checkpoint.txt
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas        95 Apr 29 17:38 pilot_heartbeat.json
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas       823 Apr 29 17:38 pilotlog.txt
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas   2389845 Apr 29 17:38 log.49178102._000163.job.log.1
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas       357 Apr 29 17:38 output.list
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas       410 Apr 29 17:38 runtime_log
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas   2949120 Apr 29 17:38 result.tar.gz
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas      8965 Apr 29 17:38 runtime_log.err
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas       663 Apr 29 17:38 af530893e3bf.diag
[2026-04-29 17:38:34] -rw-r--r--. 1 boincer umatlas     21179 Apr 29 17:38 stderr.txt
[2026-04-29 17:38:34] HITS file was successfully produced:
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas 236424643 Apr 29 17:36 shared/HITS.pool.root.1
[2026-04-29 17:38:34]  *** Contents of shared directory: ***
[2026-04-29 17:38:34] total 464296
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas 235343449 Apr 29 10:08 ATLAS.root_0
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 10:08 start_atlas.sh
[2026-04-29 17:38:34] -rw-r--r--. 2 boincer umatlas    697431 Apr 29 10:08 input.tar.gz
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas 236424643 Apr 29 17:36 HITS.pool.root.1
[2026-04-29 17:38:34] -rw-------. 1 boincer umatlas   2949120 Apr 29 17:38 result.tar.gz
17:38:35 (2740752): run_atlas exited; CPU time 90308.779301
17:38:35 (2740752): called boinc_finish(0)

</stderr_txt>
]]>

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