Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:24:51 (28981): wrapper (7.7.26015): starting
01:24:51 (28981): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 01:24:51] Arguments: --nthreads 8
[2026-04-30 01:24:51] Threads: 8
[2026-04-30 01:24:51] Checking for CVMFS
[2026-04-30 01:24:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 01:24:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 01:24:55] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 01:24:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 01:24:57] 2.11.2.0 24747 20556 103704 159024 0 53 16642554 25165824 96 130560 0 9223703 99.834 6221058 7498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 01:24:57] CVMFS is ok
[2026-04-30 01:24:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 01:24:57] Checking for apptainer binary...
[2026-04-30 01:24:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 01:24:57] Running /usr/bin/apptainer --version
[2026-04-30 01:24:57] apptainer version 1.3.2-1.el7
[2026-04-30 01:24:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 01:25:00] cg-vwn480.simple-grid.lan
[2026-04-30 01:25:00] apptainer works
[2026-04-30 01:25:00] Set ATHENA_PROC_NUMBER=8
[2026-04-30 01:25:00] Set ATHENA_CORE_NUMBER=8
[2026-04-30 01:25:00] Starting ATLAS job with PandaID=7118493938
[2026-04-30 01:25:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 07:27:05]  *** The last 200 lines of the pilot log: ***
[2026-04-30 07:27:05] 2026-04-30 05:25:51,772 | INFO     | this job has now completed (state=finished)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,773 | INFO     | log transfer has been attempted: DONE
[2026-04-30 07:27:05] 2026-04-30 05:25:51,773 | INFO     | job 7118493938 has finished - writing final server update
[2026-04-30 07:27:05] 2026-04-30 05:25:51,773 | INFO     | total number of processed events: 400 (read)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,775 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7118493938/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,776 | INFO     | extracted standard info from prmon json
[2026-04-30 07:27:05] 2026-04-30 05:25:51,776 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 07:27:05] 2026-04-30 05:25:51,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 07:27:05] 2026-04-30 05:25:51,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 07:27:05] 2026-04-30 05:25:51,783 | INFO     | fitting pss+swap vs Time
[2026-04-30 07:27:05] 2026-04-30 05:25:51,783 | INFO     | sum of square deviations: 12512874612.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,787 | INFO     | sum of deviations: 171325773152.00003
[2026-04-30 07:27:05] 2026-04-30 05:25:51,788 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,788 | INFO     | mean y: 2476928.8104956266
[2026-04-30 07:27:05] 2026-04-30 05:25:51,788 | INFO     | intersect: 2476928.8104956266
[2026-04-30 07:27:05] 2026-04-30 05:25:51,788 | INFO     | chi2: 8.93435232566204
[2026-04-30 07:27:05] 2026-04-30 05:25:51,789 | INFO     | sum of square deviations: 11973599384.5
[2026-04-30 07:27:05] 2026-04-30 05:25:51,793 | INFO     | sum of deviations: 191782704939.5
[2026-04-30 07:27:05] 2026-04-30 05:25:51,793 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,793 | INFO     | mean y: 2482636.7130177515
[2026-04-30 07:27:05] 2026-04-30 05:25:51,793 | INFO     | intersect: 2482636.7130177515
[2026-04-30 07:27:05] 2026-04-30 05:25:51,794 | INFO     | chi2: 8.221066521060939
[2026-04-30 07:27:05] 2026-04-30 05:25:51,794 | INFO     | current chi2=8.221066521060939 (change=7.983631925420474 %)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,794 | INFO     | right removable region: 337
[2026-04-30 07:27:05] 2026-04-30 05:25:51,795 | INFO     | sum of square deviations: 11973599384.5
[2026-04-30 07:27:05] 2026-04-30 05:25:51,798 | INFO     | sum of deviations: 46036030952.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,798 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,798 | INFO     | mean y: 2512348.846153846
[2026-04-30 07:27:05] 2026-04-30 05:25:51,798 | INFO     | intersect: 2512348.846153846
[2026-04-30 07:27:05] 2026-04-30 05:25:51,799 | INFO     | chi2: 3.7234302351301225
[2026-04-30 07:27:05] 2026-04-30 05:25:51,799 | INFO     | current chi2=3.7234302351301225 (change=58.32456456373054 %)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,800 | INFO     | sum of square deviations: 11450045382.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,803 | INFO     | sum of deviations: -45726783827.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,803 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,803 | INFO     | mean y: 2539037.033033033
[2026-04-30 07:27:05] 2026-04-30 05:25:51,803 | INFO     | intersect: 2539037.033033033
[2026-04-30 07:27:05] 2026-04-30 05:25:51,804 | INFO     | chi2: 1.0165456695556738
[2026-04-30 07:27:05] 2026-04-30 05:25:51,804 | INFO     | current chi2=1.0165456695556738 (change=72.69867822512998 %)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,804 | INFO     | sum of square deviations: 10941980042.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,808 | INFO     | sum of deviations: -58196440030.5
[2026-04-30 07:27:05] 2026-04-30 05:25:51,808 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,808 | INFO     | mean y: 2542760.0213414636
[2026-04-30 07:27:05] 2026-04-30 05:25:51,808 | INFO     | intersect: 2542760.0213414636
[2026-04-30 07:27:05] 2026-04-30 05:25:51,814 | INFO     | chi2: 0.9322655211156441
[2026-04-30 07:27:05] 2026-04-30 05:25:51,814 | INFO     | current chi2=0.9322655211156441 (change=8.290837388237373 %)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,814 | INFO     | left removable region: 15
[2026-04-30 07:27:05] 2026-04-30 05:25:51,815 | INFO     | sum of square deviations: 10352419220.5
[2026-04-30 07:27:05] 2026-04-30 05:25:51,818 | INFO     | sum of deviations: -35231436787.50001
[2026-04-30 07:27:05] 2026-04-30 05:25:51,818 | INFO     | mean x (centered): 0.0
[2026-04-30 07:27:05] 2026-04-30 05:25:51,818 | INFO     | mean y: 2549782.897515528
[2026-04-30 07:27:05] 2026-04-30 05:25:51,818 | INFO     | intersect: 2549782.897515528
[2026-04-30 07:27:05] 2026-04-30 05:25:51,819 | INFO     | chi2: 0.14604965284872565
[2026-04-30 07:27:05] 2026-04-30 05:25:51,819 | INFO     | current memory leak: -3.40 B/s (using 322 data points, chi2=0.15)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,825 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | ..............................
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | . Timing measurements:
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | . get job = 0 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | . initial setup = 115 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | . payload setup = 209 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,826 | INFO     | . stage-in = 0 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,827 | INFO     | . payload execution = 21038 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,827 | INFO     | . stage-out = 3 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,827 | INFO     | . log creation = 1 s
[2026-04-30 07:27:05] 2026-04-30 05:25:51,827 | INFO     | ..............................
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | 
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | job summary report
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | --------------------------------------------------
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | PanDA job id: 7118493938
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | task id: 49863851
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | errors: (none)
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 07:27:05] 2026-04-30 05:25:52,003 | INFO     | pilot state: finished 
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | transexitcode: 0
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | exeerrorcode: 0
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | exeerrordiag: 
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | exitcode: 0
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | exitmsg: OK
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | cpuconsumptiontime: 80025 s
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | nevents: 400
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | neventsw: 0
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | pid: 5040
[2026-04-30 07:27:05] 2026-04-30 05:25:52,004 | INFO     | pgrp: 5040
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | corecount: 8
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | event service: False
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | sizes: {0: 2280739, 1: 2282568, 12: 2282568, 21252: 2316289, 21257: 2325317, 21258: 2325373, 21262: 2325695}
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | --------------------------------------------------
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | 
[2026-04-30 07:27:05] 2026-04-30 05:25:52,005 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-04-30 07:27:05] 2026-04-30 05:25:52,565 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,565 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,565 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,567 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 07:27:05] 2026-04-30 05:25:52,568 | INFO     | job 7118493938 has completed (purged errors)
[2026-04-30 07:27:05] 2026-04-30 05:25:52,568 | INFO     | overall cleanup function is called
[2026-04-30 07:27:05] 2026-04-30 05:25:53,575 | INFO     | --- collectZombieJob: --- 10, [5040]
[2026-04-30 07:27:05] 2026-04-30 05:25:53,576 | INFO     | zombie collector waiting for pid 5040
[2026-04-30 07:27:05] 2026-04-30 05:25:53,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 07:27:05] 2026-04-30 05:25:53,576 | INFO     | collected zombie processes
[2026-04-30 07:27:05] 2026-04-30 05:25:53,576 | INFO     | will attempt to kill all subprocesses of pid=5040
[2026-04-30 07:27:05] 2026-04-30 05:25:53,642 | INFO     | process IDs to be killed: [5040] (in reverse order)
[2026-04-30 07:27:05] 2026-04-30 05:25:54,474 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 07:27:05] 2026-04-30 05:25:54,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 07:27:05] 2026-04-30 05:25:54,476 | INFO     | did not find any defunct processes belonging to 5040
[2026-04-30 07:27:05] 2026-04-30 05:25:54,478 | INFO     | did not find any defunct processes belonging to 5040
[2026-04-30 07:27:05] 2026-04-30 05:25:54,478 | INFO     | Ready for new job
[2026-04-30 07:27:05] 2026-04-30 05:25:54,480 | INFO     | ***************************************
[2026-04-30 07:27:05] 2026-04-30 05:25:54,480 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 07:27:05] 2026-04-30 05:25:54,480 | INFO     | ***************************************
[2026-04-30 07:27:05] 2026-04-30 05:25:54,480 | INFO     | 
[2026-04-30 07:27:05] 2026-04-30 05:25:54,481 | INFO     | pilot is running in a VM
[2026-04-30 07:27:05] 2026-04-30 05:25:54,481 | INFO     | architecture information:
[2026-04-30 07:27:05] 2026-04-30 05:25:54,481 | INFO     | executing command: cat /etc/os-release
[2026-04-30 07:27:05] 2026-04-30 05:25:54,796 | INFO     | cat /etc/os-release:
[2026-04-30 07:27:05] NAME="CentOS Linux"
[2026-04-30 07:27:05] VERSION="7 (Core)"
[2026-04-30 07:27:05] ID="centos"
[2026-04-30 07:27:05] ID_LIKE="rhel fedora"
[2026-04-30 07:27:05] VERSION_ID="7"
[2026-04-30 07:27:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 07:27:05] ANSI_COLOR="0;31"
[2026-04-30 07:27:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 07:27:05] HOME_URL="https://www.centos.org/"
[2026-04-30 07:27:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 07:27:05] 
[2026-04-30 07:27:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 07:27:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 07:27:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 07:27:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 07:27:05] 
[2026-04-30 07:27:05] 2026-04-30 05:25:54,796 | INFO     | ***************************************
[2026-04-30 07:27:05] 2026-04-30 05:25:55,300 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-04-30 07:27:05] 2026-04-30 05:25:55,536 | INFO     | sufficient remaining disk space (496716742656 B)
[2026-04-30 07:27:05] 2026-04-30 05:25:55,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 07:27:05] 2026-04-30 05:25:55,537 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 07:27:05] 2026-04-30 05:25:55,537 | INFO     | update_server=False
[2026-04-30 07:27:05] 2026-04-30 05:25:55,537 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 07:27:05] 2026-04-30 05:25:55,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 07:27:05] 2026-04-30 05:25:55,706 | INFO     | all payload control threads have been joined
[2026-04-30 07:27:05] 2026-04-30 05:25:55,815 | INFO     | all data control threads have been joined
[2026-04-30 07:27:05] 2026-04-30 05:25:55,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 07:27:05] 2026-04-30 05:25:55,939 | INFO     | aborting loop
[2026-04-30 07:27:05] 2026-04-30 05:25:56,543 | INFO     | [job] retrieve thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,577 | INFO     | [job] validate thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,665 | INFO     | [payload] validate_post thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,712 | INFO     | [payload] control thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,721 | INFO     | all job control threads have been joined
[2026-04-30 07:27:05] 2026-04-30 05:25:56,782 | INFO     | [data] copytool_in thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,822 | INFO     | [data] control thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:56,945 | INFO     | [job] job monitor thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:57,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 07:27:05] 2026-04-30 05:25:57,257 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:57,263 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:57,544 | INFO     | [data] copytool_out thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:57,582 | INFO     | [payload] failed_post thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:57,728 | INFO     | [job] control thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:58,004 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:58,007 | INFO     | [job] queue monitor thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:58,010 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:25:58,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 07:27:05] 2026-04-30 05:26:02,897 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 07:27:05] 2026-04-30 05:26:25,405 | INFO     | PID=512 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-04-30 07:27:05] 2026-04-30 05:26:25,406 | INFO     | .. there are 2 such processes running
[2026-04-30 07:27:05] 2026-04-30 05:26:25,406 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 07:27:05] 2026-04-30 05:26:25,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 07:27:05] 2026-04-30 05:26:25,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 07:27:05] 2026-04-30 05:26:53,554 | INFO     | [monitor] cgroup control has ended
[2026-04-30 07:27:05] 2026-04-30 05:26:54,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721773131584)>', '<ExcThread(monitor, started 139721476904704)>']
[2026-04-30 07:27:05] 2026-04-30 05:26:55,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 07:27:05] 2026-04-30 05:26:55,585 | INFO     | [monitor] control thread has ended
[2026-04-30 07:27:05] 2026-04-30 05:27:00,020 | INFO     | all workflow threads have been joined
[2026-04-30 07:27:05] 2026-04-30 05:27:00,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 07:27:05] 2026-04-30 05:27:00,021 | INFO     | traces error code: 0
[2026-04-30 07:27:05] 2026-04-30 05:27:00,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 07:27:05] 2026-04-30 05:27:00,475 [wrapper] ==== pilot stdout END ====
[2026-04-30 07:27:05] 2026-04-30 05:27:00,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 07:27:05] 2026-04-30 05:27:00,646 [wrapper] pilotpid: 512
[2026-04-30 07:27:05] 2026-04-30 05:27:00,755 [wrapper] Pilot exit status: 0
[2026-04-30 07:27:05] 2026-04-30 05:27:01,271 [wrapper] pandaids: 7118493938
[2026-04-30 07:27:05] 2026-04-30 05:27:02,336 [wrapper] cleanup supervisor_pilot 13181 513
[2026-04-30 07:27:05] 2026-04-30 05:27:02,433 [wrapper] Test setup, not cleaning
[2026-04-30 07:27:05] 2026-04-30 05:27:02,545 [wrapper] apfmon messages muted
[2026-04-30 07:27:05] 2026-04-30 05:27:02,645 [wrapper] ==== wrapper stdout END ====
[2026-04-30 07:27:05] 2026-04-30 05:27:02,763 [wrapper] ==== wrapper stderr END ====
[2026-04-30 07:27:05]  *** Error codes and diagnostics ***
[2026-04-30 07:27:05]     "exeErrorCode": 0,
[2026-04-30 07:27:05]     "pilotErrorCode": 0,
[2026-04-30 07:27:05]  *** Listing of results directory ***
[2026-04-30 07:27:05] total 475004
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc    683926 Apr 29 14:00 pilot3.tar.gz
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc      5631 Apr 29 14:07 queuedata.json
[2026-04-30 07:27:05] -rwx------. 1 boinc boinc     36322 Apr 29 14:07 runpilot2-wrapper.sh
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc       100 Apr 30 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 07:27:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 01:24 run_atlas
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc       105 Apr 30 01:24 job.xml
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc      6308 Apr 30 01:24 init_data.xml
[2026-04-30 07:27:05] -rw-r--r--. 2 boinc boinc 259075670 Apr 30 01:24 EVNT.49863848._000174.pool.root.1
[2026-04-30 07:27:05] -rw-r--r--. 2 boinc boinc     15667 Apr 30 01:24 start_atlas.sh
[2026-04-30 07:27:05] drwxrwx--x. 2 boinc boinc        68 Apr 30 01:24 shared
[2026-04-30 07:27:05] -rw-r--r--. 2 boinc boinc    697437 Apr 30 01:24 input.tar.gz
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc         0 Apr 30 01:24 boinc_lockfile
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc      2650 Apr 30 01:25 pandaJob.out
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc       415 Apr 30 01:31 workernode_map.json
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc   1001891 Apr 30 01:31 agis_schedconf.cvmfs.json
[2026-04-30 07:27:05] drwx------. 5 boinc boinc      4096 Apr 30 01:31 pilot3
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc 218395517 Apr 30 07:24 HITS.49863851._004344.pool.root.1
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc       489 Apr 30 07:24 boinc_task_state.xml
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc        95 Apr 30 07:25 pilot_heartbeat.json
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc      1012 Apr 30 07:25 memory_monitor_summary.json
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc   1512704 Apr 30 07:25 agis_ddmendpoints.agis.ALL.json
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc    447650 Apr 30 07:25 log.49863851._004344.job.log.tgz.1
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc      6335 Apr 30 07:25 heartbeat_new.json
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc      6226 Apr 30 07:25 heartbeat.json
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc      8192 Apr 30 07:26 boinc_mmap_file
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc        28 Apr 30 07:26 wrapper_checkpoint.txt
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc      4882 Apr 30 07:27 pilotlog.txt
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc   1954998 Apr 30 07:27 log.49863851._004344.job.log.1
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc       357 Apr 30 07:27 output.list
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc       410 Apr 30 07:27 runtime_log
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc   2416640 Apr 30 07:27 result.tar.gz
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc      8455 Apr 30 07:27 runtime_log.err
[2026-04-30 07:27:05] -rw-------. 1 boinc boinc       656 Apr 30 07:27 f477c64d3f32.diag
[2026-04-30 07:27:05] -rw-r--r--. 1 boinc boinc     20617 Apr 30 07:27 stderr.txt
[2026-04-30 07:27:05] HITS file was successfully produced:
[2026-04-30 07:27:06] -rw-------. 1 boinc boinc 218395517 Apr 30 07:24 shared/HITS.pool.root.1
[2026-04-30 07:27:06]  *** Contents of shared directory: ***
[2026-04-30 07:27:06] total 469344
[2026-04-30 07:27:06] -rw-r--r--. 2 boinc boinc 259075670 Apr 30 01:24 ATLAS.root_0
[2026-04-30 07:27:06] -rw-r--r--. 2 boinc boinc     15667 Apr 30 01:24 start_atlas.sh
[2026-04-30 07:27:06] -rw-r--r--. 2 boinc boinc    697437 Apr 30 01:24 input.tar.gz
[2026-04-30 07:27:06] -rw-------. 1 boinc boinc 218395517 Apr 30 07:24 HITS.pool.root.1
[2026-04-30 07:27:06] -rw-------. 1 boinc boinc   2416640 Apr 30 07:27 result.tar.gz
07:27:07 (28981): run_atlas exited; CPU time 80220.752467
07:27:07 (28981): called boinc_finish(0)

</stderr_txt>
]]>

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