Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:07 (17383): wrapper (7.7.26015): starting
20:01:07 (17383): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 20:01:07] Arguments: --nthreads 8
[2026-04-29 20:01:07] Threads: 8
[2026-04-29 20:01:07] Checking for CVMFS
[2026-04-29 20:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 20:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 20:01:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 20:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 20:01:15] 2.11.2.0 15723 20217 97892 159014 2 54 17886840 25165824 96 130560 0 5651445 99.901 5143430 9617 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 20:01:15] CVMFS is ok
[2026-04-29 20:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 20:01:15] Checking for apptainer binary...
[2026-04-29 20:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 20:01:15] Running /usr/bin/apptainer --version
[2026-04-29 20:01:15] apptainer version 1.3.2-1.el7
[2026-04-29 20:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 20:01:46] cg-vwn428.simple-grid.lan
[2026-04-29 20:01:46] apptainer works
[2026-04-29 20:01:46] Set ATHENA_PROC_NUMBER=8
[2026-04-29 20:01:46] Set ATHENA_CORE_NUMBER=8
[2026-04-29 20:01:46] Starting ATLAS job with PandaID=7118494232
[2026-04-29 20:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 02:09:50]  *** The last 200 lines of the pilot log: ***
[2026-04-30 02:09:50] 2026-04-30 00:09:14,046 | INFO     | fitting pss+swap vs Time
[2026-04-30 02:09:50] 2026-04-30 00:09:14,047 | INFO     | sum of square deviations: 13294714387.5
[2026-04-30 02:09:50] 2026-04-30 00:09:14,051 | INFO     | sum of deviations: 153885273461.00006
[2026-04-30 02:09:50] 2026-04-30 00:09:14,051 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,051 | INFO     | mean y: 2491010.274285714
[2026-04-30 02:09:50] 2026-04-30 00:09:14,052 | INFO     | intersect: 2491010.274285714
[2026-04-30 02:09:50] 2026-04-30 00:09:14,052 | INFO     | chi2: 9.827384902102285
[2026-04-30 02:09:50] 2026-04-30 00:09:14,053 | INFO     | sum of square deviations: 12733038740.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,057 | INFO     | sum of deviations: 175137934235.99997
[2026-04-30 02:09:50] 2026-04-30 00:09:14,057 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,057 | INFO     | mean y: 2496706.6985507244
[2026-04-30 02:09:50] 2026-04-30 00:09:14,057 | INFO     | intersect: 2496706.6985507244
[2026-04-30 02:09:50] 2026-04-30 00:09:14,058 | INFO     | chi2: 9.128943255428219
[2026-04-30 02:09:50] 2026-04-30 00:09:14,058 | INFO     | current chi2=9.128943255428219 (change=7.107095668194035 %)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,058 | INFO     | right removable region: 344
[2026-04-30 02:09:50] 2026-04-30 00:09:14,059 | INFO     | sum of square deviations: 12733038740.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,067 | INFO     | sum of deviations: 27236847760.999977
[2026-04-30 02:09:50] 2026-04-30 00:09:14,068 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,068 | INFO     | mean y: 2525384.0057971017
[2026-04-30 02:09:50] 2026-04-30 00:09:14,068 | INFO     | intersect: 2525384.0057971017
[2026-04-30 02:09:50] 2026-04-30 00:09:14,069 | INFO     | chi2: 4.676198018754076
[2026-04-30 02:09:50] 2026-04-30 00:09:14,069 | INFO     | current chi2=4.676198018754076 (change=52.416659514844696 %)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,069 | INFO     | sum of square deviations: 12187409905.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,073 | INFO     | sum of deviations: -74150003416.5
[2026-04-30 02:09:50] 2026-04-30 00:09:14,073 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,073 | INFO     | mean y: 2553703.785294118
[2026-04-30 02:09:50] 2026-04-30 00:09:14,073 | INFO     | intersect: 2553703.785294118
[2026-04-30 02:09:50] 2026-04-30 00:09:14,074 | INFO     | chi2: 1.5564911526130953
[2026-04-30 02:09:50] 2026-04-30 00:09:14,074 | INFO     | current chi2=1.5564911526130953 (change=66.7146013412878 %)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,075 | INFO     | sum of square deviations: 11657595320.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,078 | INFO     | sum of deviations: -104465467162.00002
[2026-04-30 02:09:50] 2026-04-30 00:09:14,079 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,079 | INFO     | mean y: 2562376.6686567166
[2026-04-30 02:09:50] 2026-04-30 00:09:14,079 | INFO     | intersect: 2562376.6686567166
[2026-04-30 02:09:50] 2026-04-30 00:09:14,079 | INFO     | chi2: 1.07095356850314
[2026-04-30 02:09:50] 2026-04-30 00:09:14,085 | INFO     | current chi2=1.07095356850314 (change=31.194368390389936 %)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,085 | INFO     | sum of square deviations: 11143362422.5
[2026-04-30 02:09:50] 2026-04-30 00:09:14,089 | INFO     | sum of deviations: -105478630710.49998
[2026-04-30 02:09:50] 2026-04-30 00:09:14,089 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,089 | INFO     | mean y: 2562661.1484848484
[2026-04-30 02:09:50] 2026-04-30 00:09:14,089 | INFO     | intersect: 2562661.1484848484
[2026-04-30 02:09:50] 2026-04-30 00:09:14,090 | INFO     | chi2: 1.0488910572522108
[2026-04-30 02:09:50] 2026-04-30 00:09:14,090 | INFO     | current chi2=1.0488910572522108 (change=2.0600810249659753 %)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,090 | INFO     | left removable region: 20
[2026-04-30 02:09:50] 2026-04-30 00:09:14,091 | INFO     | sum of square deviations: 10546523325.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,095 | INFO     | sum of deviations: -81585141648.49998
[2026-04-30 02:09:50] 2026-04-30 00:09:14,095 | INFO     | mean x (centered): 0.0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,095 | INFO     | mean y: 2569883.2438271604
[2026-04-30 02:09:50] 2026-04-30 00:09:14,095 | INFO     | intersect: 2569883.2438271604
[2026-04-30 02:09:50] 2026-04-30 00:09:14,096 | INFO     | chi2: 0.2686315719586088
[2026-04-30 02:09:50] 2026-04-30 00:09:14,096 | INFO     | current memory leak: -7.74 B/s (using 324 data points, chi2=0.27)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,096 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | ..............................
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . Timing measurements:
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . get job = 0 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . initial setup = 121 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . payload setup = 210 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . stage-in = 0 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . payload execution = 21456 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,097 | INFO     | . stage-out = 3 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,098 | INFO     | . log creation = 1 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,098 | INFO     | ..............................
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | 
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | job summary report
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | --------------------------------------------------
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | PanDA job id: 7118494232
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | task id: 49863840
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | errors: (none)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,277 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | pilot state: finished 
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | transexitcode: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | exeerrorcode: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | exeerrordiag: 
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | exitcode: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | exitmsg: OK
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | cpuconsumptiontime: 81159 s
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | nevents: 400
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | neventsw: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | pid: 25845
[2026-04-30 02:09:50] 2026-04-30 00:09:14,278 | INFO     | pgrp: 25845
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | corecount: 8
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | event service: False
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | sizes: {0: 2280072, 1: 2269787, 2: 2282586, 21671: 2316427, 21675: 2325619}
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | --------------------------------------------------
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | 
[2026-04-30 02:09:50] 2026-04-30 00:09:14,279 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | job 7118494232 has completed (purged errors)
[2026-04-30 02:09:50] 2026-04-30 00:09:14,915 | INFO     | overall cleanup function is called
[2026-04-30 02:09:50] 2026-04-30 00:09:15,925 | INFO     | --- collectZombieJob: --- 10, [25845]
[2026-04-30 02:09:50] 2026-04-30 00:09:15,925 | INFO     | zombie collector waiting for pid 25845
[2026-04-30 02:09:50] 2026-04-30 00:09:15,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 02:09:50] 2026-04-30 00:09:15,925 | INFO     | collected zombie processes
[2026-04-30 02:09:50] 2026-04-30 00:09:15,925 | INFO     | will attempt to kill all subprocesses of pid=25845
[2026-04-30 02:09:50] 2026-04-30 00:09:15,995 | INFO     | process IDs to be killed: [25845] (in reverse order)
[2026-04-30 02:09:50] 2026-04-30 00:09:16,756 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 02:09:50] 2026-04-30 00:09:16,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 02:09:50] 2026-04-30 00:09:16,759 | INFO     | did not find any defunct processes belonging to 25845
[2026-04-30 02:09:50] 2026-04-30 00:09:16,761 | INFO     | did not find any defunct processes belonging to 25845
[2026-04-30 02:09:50] 2026-04-30 00:09:16,761 | INFO     | Ready for new job
[2026-04-30 02:09:50] 2026-04-30 00:09:16,763 | INFO     | ***************************************
[2026-04-30 02:09:50] 2026-04-30 00:09:16,763 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 02:09:50] 2026-04-30 00:09:16,763 | INFO     | ***************************************
[2026-04-30 02:09:50] 2026-04-30 00:09:16,764 | INFO     | 
[2026-04-30 02:09:50] 2026-04-30 00:09:16,764 | INFO     | pilot is running in a VM
[2026-04-30 02:09:50] 2026-04-30 00:09:16,764 | INFO     | architecture information:
[2026-04-30 02:09:50] 2026-04-30 00:09:16,771 | INFO     | executing command: cat /etc/os-release
[2026-04-30 02:09:50] 2026-04-30 00:09:17,034 | INFO     | cat /etc/os-release:
[2026-04-30 02:09:50] NAME="CentOS Linux"
[2026-04-30 02:09:50] VERSION="7 (Core)"
[2026-04-30 02:09:50] ID="centos"
[2026-04-30 02:09:50] ID_LIKE="rhel fedora"
[2026-04-30 02:09:50] VERSION_ID="7"
[2026-04-30 02:09:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 02:09:50] ANSI_COLOR="0;31"
[2026-04-30 02:09:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 02:09:50] HOME_URL="https://www.centos.org/"
[2026-04-30 02:09:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 02:09:50] 
[2026-04-30 02:09:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 02:09:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 02:09:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 02:09:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 02:09:50] 
[2026-04-30 02:09:50] 2026-04-30 00:09:17,035 | INFO     | ***************************************
[2026-04-30 02:09:50] 2026-04-30 00:09:17,538 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-30 02:09:50] 2026-04-30 00:09:17,800 | INFO     | sufficient remaining disk space (496599302144 B)
[2026-04-30 02:09:50] 2026-04-30 00:09:17,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 02:09:50] 2026-04-30 00:09:17,801 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 02:09:50] 2026-04-30 00:09:17,801 | INFO     | update_server=False
[2026-04-30 02:09:50] 2026-04-30 00:09:17,801 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 02:09:50] 2026-04-30 00:09:18,103 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 02:09:50] 2026-04-30 00:09:18,103 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 02:09:50] 2026-04-30 00:09:18,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 02:09:50] 2026-04-30 00:09:18,103 | INFO     | will abort loop
[2026-04-30 02:09:50] 2026-04-30 00:09:18,614 | INFO     | all data control threads have been joined
[2026-04-30 02:09:50] 2026-04-30 00:09:18,807 | INFO     | [job] retrieve thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:18,923 | INFO     | [payload] validate_post thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:18,998 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 02:09:50] 2026-04-30 00:09:19,109 | INFO     | [job] job monitor thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,184 | INFO     | all payload control threads have been joined
[2026-04-30 02:09:50] 2026-04-30 00:09:19,285 | INFO     | [job] validate thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 02:09:50] 2026-04-30 00:09:19,318 | INFO     | all job control threads have been joined
[2026-04-30 02:09:50] 2026-04-30 00:09:19,620 | INFO     | [data] control thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,806 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:19,972 | INFO     | [data] copytool_in thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:20,013 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:20,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 02:09:50] 2026-04-30 00:09:20,089 | INFO     | [payload] failed_post thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:20,190 | INFO     | [payload] control thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:20,299 | INFO     | [job] queue monitor thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:20,324 | INFO     | [job] control thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:21,035 | INFO     | [data] copytool_out thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:24,048 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 02:09:50] 2026-04-30 00:09:32,896 | INFO     | [monitor] cgroup control has ended
[2026-04-30 02:09:50] 2026-04-30 00:09:33,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571212584768)>', '<ExcThread(monitor, started 140570638931712)>']
[2026-04-30 02:09:50] 2026-04-30 00:09:38,050 | INFO     | all workflow threads have been joined
[2026-04-30 02:09:50] 2026-04-30 00:09:38,050 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 02:09:50] 2026-04-30 00:09:38,050 | INFO     | traces error code: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:38,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 02:09:50] 2026-04-30 00:09:46,090 | INFO     | PID=21382 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 02:09:50] 2026-04-30 00:09:46,091 | INFO     | .. there are 2 such processes running
[2026-04-30 02:09:50] 2026-04-30 00:09:46,092 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 02:09:50] 2026-04-30 00:09:46,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 02:09:50] 2026-04-30 00:09:46,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 02:09:50] 2026-04-30 00:09:46,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 02:09:50] 2026-04-30 00:09:46,093 | CRITICAL | thread 'MainThread' is not alive
[2026-04-30 02:09:50] 2026-04-30 00:09:46,093 | INFO     | [monitor] control thread has ended
[2026-04-30 02:09:50] 2026-04-30 00:09:46,481 [wrapper] ==== pilot stdout END ====
[2026-04-30 02:09:50] 2026-04-30 00:09:46,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 02:09:50] 2026-04-30 00:09:46,717 [wrapper] pilotpid: 21382
[2026-04-30 02:09:50] 2026-04-30 00:09:46,792 [wrapper] Pilot exit status: 0
[2026-04-30 02:09:50] 2026-04-30 00:09:47,242 [wrapper] pandaids: 7118494232
[2026-04-30 02:09:50] 2026-04-30 00:09:48,229 [wrapper] cleanup supervisor_pilot  1684 21383
[2026-04-30 02:09:50] 2026-04-30 00:09:48,342 [wrapper] Test setup, not cleaning
[2026-04-30 02:09:50] 2026-04-30 00:09:48,487 [wrapper] apfmon messages muted
[2026-04-30 02:09:50] 2026-04-30 00:09:48,546 [wrapper] ==== wrapper stdout END ====
[2026-04-30 02:09:50] 2026-04-30 00:09:48,644 [wrapper] ==== wrapper stderr END ====
[2026-04-30 02:09:50]  *** Error codes and diagnostics ***
[2026-04-30 02:09:50]     "exeErrorCode": 0,
[2026-04-30 02:09:50]     "pilotErrorCode": 0,
[2026-04-30 02:09:50]  *** Listing of results directory ***
[2026-04-30 02:09:50] total 477892
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc    683926 Apr 29 14:00 pilot3.tar.gz
[2026-04-30 02:09:50] -rwx------. 1 boinc boinc     36322 Apr 29 14:04 runpilot2-wrapper.sh
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc      5631 Apr 29 14:05 queuedata.json
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc       100 Apr 29 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 02:09:50] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 20:01 run_atlas
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc       105 Apr 29 20:01 job.xml
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc      6306 Apr 29 20:01 init_data.xml
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc 264184099 Apr 29 20:01 EVNT.49863838._000182.pool.root.1
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc     15667 Apr 29 20:01 start_atlas.sh
[2026-04-30 02:09:50] drwxrwx--x. 2 boinc boinc        68 Apr 29 20:01 shared
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc    697423 Apr 29 20:01 input.tar.gz
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc         0 Apr 29 20:01 boinc_lockfile
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc      2591 Apr 29 20:01 pandaJob.out
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc       415 Apr 29 20:07 workernode_map.json
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc   1001909 Apr 29 20:07 agis_schedconf.cvmfs.json
[2026-04-30 02:09:50] drwx------. 5 boinc boinc      4096 Apr 29 20:07 pilot3
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc 216131234 Apr 30 02:07 HITS.49863840._004056.pool.root.1
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc       489 Apr 30 02:08 boinc_task_state.xml
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc      1012 Apr 30 02:09 memory_monitor_summary.json
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc   1512704 Apr 30 02:09 agis_ddmendpoints.agis.ALL.json
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc    471100 Apr 30 02:09 log.49863840._004056.job.log.tgz.1
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc      6337 Apr 30 02:09 heartbeat_new.json
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc      6228 Apr 30 02:09 heartbeat.json
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc      8192 Apr 30 02:09 boinc_mmap_file
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc        95 Apr 30 02:09 pilot_heartbeat.json
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc       890 Apr 30 02:09 pilotlog.txt
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc        28 Apr 30 02:09 wrapper_checkpoint.txt
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc   1992178 Apr 30 02:09 log.49863840._004056.job.log.1
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc       357 Apr 30 02:09 output.list
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc       410 Apr 30 02:09 runtime_log
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc   2478080 Apr 30 02:09 result.tar.gz
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc      8439 Apr 30 02:09 runtime_log.err
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc       656 Apr 30 02:09 f3e1f5cb20a1.diag
[2026-04-30 02:09:50] -rw-r--r--. 1 boinc boinc     20455 Apr 30 02:09 stderr.txt
[2026-04-30 02:09:50] HITS file was successfully produced:
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc 216131234 Apr 30 02:07 shared/HITS.pool.root.1
[2026-04-30 02:09:50]  *** Contents of shared directory: ***
[2026-04-30 02:09:50] total 472184
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc 264184099 Apr 29 20:01 ATLAS.root_0
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc     15667 Apr 29 20:01 start_atlas.sh
[2026-04-30 02:09:50] -rw-r--r--. 2 boinc boinc    697423 Apr 29 20:01 input.tar.gz
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc 216131234 Apr 30 02:07 HITS.pool.root.1
[2026-04-30 02:09:50] -rw-------. 1 boinc boinc   2478080 Apr 30 02:09 result.tar.gz
02:09:51 (17383): run_atlas exited; CPU time 81366.375990
02:09:51 (17383): called boinc_finish(0)

</stderr_txt>
]]>

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