Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:07:34 (3248): wrapper (7.7.26015): starting
22:07:34 (3248): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 22:07:34] Arguments: --nthreads 8
[2026-04-29 22:07:34] Threads: 8
[2026-04-29 22:07:34] Checking for CVMFS
[2026-04-29 22:07:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 22:07:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 22:07:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 22:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 22:07:40] 2.11.2.0 21071 20343 101080 159017 0 73 22416352 25165824 96 130560 0 7016512 99.933 5214190 9130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 22:07:40] CVMFS is ok
[2026-04-29 22:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 22:07:40] Checking for apptainer binary...
[2026-04-29 22:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 22:07:40] Running /usr/bin/apptainer --version
[2026-04-29 22:07:40] apptainer version 1.3.2-1.el7
[2026-04-29 22:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 22:07:48] cg-vwn360.simple-grid.lan
[2026-04-29 22:07:48] apptainer works
[2026-04-29 22:07:48] Set ATHENA_PROC_NUMBER=8
[2026-04-29 22:07:48] Set ATHENA_CORE_NUMBER=8
[2026-04-29 22:07:48] Starting ATLAS job with PandaID=7118493810
[2026-04-29 22:07:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 04:40:45]  *** The last 200 lines of the pilot log: ***
[2026-04-30 04:40:45] 2026-04-30 02:39:38,656 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 04:40:45] 2026-04-30 02:39:38,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 04:40:45] 2026-04-30 02:39:38,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 04:40:45] 2026-04-30 02:39:38,664 | INFO     | fitting pss+swap vs Time
[2026-04-30 04:40:45] 2026-04-30 02:39:38,665 | INFO     | sum of square deviations: 15962617433.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,671 | INFO     | sum of deviations: 186957985061.00003
[2026-04-30 04:40:45] 2026-04-30 02:39:38,672 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,672 | INFO     | mean y: 2484700.5483870967
[2026-04-30 04:40:45] 2026-04-30 02:39:38,672 | INFO     | intersect: 2484700.5483870967
[2026-04-30 04:40:45] 2026-04-30 02:39:38,673 | INFO     | chi2: 9.92165255231551
[2026-04-30 04:40:45] 2026-04-30 02:39:38,673 | INFO     | sum of square deviations: 15327572968.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,678 | INFO     | sum of deviations: 209482470521.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,678 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,678 | INFO     | mean y: 2490044.073569482
[2026-04-30 04:40:45] 2026-04-30 02:39:38,678 | INFO     | intersect: 2490044.073569482
[2026-04-30 04:40:45] 2026-04-30 02:39:38,679 | INFO     | chi2: 9.212667537582442
[2026-04-30 04:40:45] 2026-04-30 02:39:38,679 | INFO     | current chi2=9.212667537582442 (change=7.145835948141579 %)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,679 | INFO     | right removable region: 366
[2026-04-30 04:40:45] 2026-04-30 02:39:38,680 | INFO     | sum of square deviations: 15327572968.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,688 | INFO     | sum of deviations: 50964423167.000015
[2026-04-30 04:40:45] 2026-04-30 02:39:38,689 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,689 | INFO     | mean y: 2517349.283378747
[2026-04-30 04:40:45] 2026-04-30 02:39:38,689 | INFO     | intersect: 2517349.283378747
[2026-04-30 04:40:45] 2026-04-30 02:39:38,690 | INFO     | chi2: 4.678933533972037
[2026-04-30 04:40:45] 2026-04-30 02:39:38,690 | INFO     | current chi2=4.678933533972037 (change=52.84118739997532 %)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,691 | INFO     | sum of square deviations: 14709598590.5
[2026-04-30 04:40:45] 2026-04-30 02:39:38,695 | INFO     | sum of deviations: -57229906285.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,695 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,695 | INFO     | mean y: 2544031.497237569
[2026-04-30 04:40:45] 2026-04-30 02:39:38,695 | INFO     | intersect: 2544031.497237569
[2026-04-30 04:40:45] 2026-04-30 02:39:38,696 | INFO     | chi2: 1.5400783161977043
[2026-04-30 04:40:45] 2026-04-30 02:39:38,696 | INFO     | current chi2=1.5400783161977043 (change=67.08484305203835 %)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,697 | INFO     | sum of square deviations: 14108461738.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,701 | INFO     | sum of deviations: -90435595079.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,701 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,702 | INFO     | mean y: 2552407.929971989
[2026-04-30 04:40:45] 2026-04-30 02:39:38,702 | INFO     | intersect: 2552407.929971989
[2026-04-30 04:40:45] 2026-04-30 02:39:38,702 | INFO     | chi2: 1.0386957520914577
[2026-04-30 04:40:45] 2026-04-30 02:39:38,702 | INFO     | current chi2=1.0386957520914577 (change=32.55565375039555 %)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,703 | INFO     | sum of square deviations: 13523929848.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,712 | INFO     | sum of deviations: -91791097734.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,713 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,713 | INFO     | mean y: 2552748.789772727
[2026-04-30 04:40:45] 2026-04-30 02:39:38,713 | INFO     | intersect: 2552748.789772727
[2026-04-30 04:40:45] 2026-04-30 02:39:38,713 | INFO     | chi2: 1.0212942248413368
[2026-04-30 04:40:45] 2026-04-30 02:39:38,714 | INFO     | current chi2=1.0212942248413368 (change=1.6753247729262577 %)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,714 | INFO     | left removable region: 20
[2026-04-30 04:40:45] 2026-04-30 02:39:38,714 | INFO     | sum of square deviations: 12844082682.5
[2026-04-30 04:40:45] 2026-04-30 02:39:38,718 | INFO     | sum of deviations: -66624849466.99999
[2026-04-30 04:40:45] 2026-04-30 02:39:38,718 | INFO     | mean x (centered): 0.0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,719 | INFO     | mean y: 2559431.393063584
[2026-04-30 04:40:45] 2026-04-30 02:39:38,719 | INFO     | intersect: 2559431.393063584
[2026-04-30 04:40:45] 2026-04-30 02:39:38,719 | INFO     | chi2: 0.23518597897488244
[2026-04-30 04:40:45] 2026-04-30 02:39:38,720 | INFO     | current memory leak: -5.19 B/s (using 346 data points, chi2=0.24)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,720 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | ..............................
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . Timing measurements:
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . get job = 0 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . initial setup = 99 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . payload setup = 310 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . stage-in = 0 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,721 | INFO     | . payload execution = 22809 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,722 | INFO     | . stage-out = 3 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,722 | INFO     | . log creation = 1 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,722 | INFO     | ..............................
[2026-04-30 04:40:45] 2026-04-30 02:39:38,859 | INFO     | 
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | job summary report
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | --------------------------------------------------
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | PanDA job id: 7118493810
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | task id: 49863851
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | errors: (none)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 04:40:45] 2026-04-30 02:39:38,860 | INFO     | pilot state: finished 
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | transexitcode: 0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | exeerrorcode: 0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | exeerrordiag: 
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | exitcode: 0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | exitmsg: OK
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | cpuconsumptiontime: 87227 s
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | nevents: 400
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | neventsw: 0
[2026-04-30 04:40:45] 2026-04-30 02:39:38,861 | INFO     | pid: 11706
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | pgrp: 11706
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | corecount: 8
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | event service: False
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | sizes: {0: 2280682, 1: 2281139, 2: 2282595, 12: 2282595, 23125: 2317384, 23129: 2326382, 23131: 2326566, 23132: 2326760}
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | --------------------------------------------------
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | 
[2026-04-30 04:40:45] 2026-04-30 02:39:38,862 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-30 04:40:45] 2026-04-30 02:39:38,894 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,894 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,894 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 04:40:45] 2026-04-30 02:39:38,897 | INFO     | job 7118493810 has completed (purged errors)
[2026-04-30 04:40:45] 2026-04-30 02:39:38,897 | INFO     | overall cleanup function is called
[2026-04-30 04:40:45] 2026-04-30 02:39:39,905 | INFO     | --- collectZombieJob: --- 10, [11706]
[2026-04-30 04:40:45] 2026-04-30 02:39:39,906 | INFO     | zombie collector waiting for pid 11706
[2026-04-30 04:40:45] 2026-04-30 02:39:39,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 04:40:45] 2026-04-30 02:39:39,906 | INFO     | collected zombie processes
[2026-04-30 04:40:45] 2026-04-30 02:39:39,906 | INFO     | will attempt to kill all subprocesses of pid=11706
[2026-04-30 04:40:45] 2026-04-30 02:39:39,963 | INFO     | process IDs to be killed: [11706] (in reverse order)
[2026-04-30 04:40:45] 2026-04-30 02:39:40,659 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 04:40:45] 2026-04-30 02:39:40,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 04:40:45] 2026-04-30 02:39:40,666 | INFO     | did not find any defunct processes belonging to 11706
[2026-04-30 04:40:45] 2026-04-30 02:39:40,668 | INFO     | did not find any defunct processes belonging to 11706
[2026-04-30 04:40:45] 2026-04-30 02:39:40,668 | INFO     | Ready for new job
[2026-04-30 04:40:45] 2026-04-30 02:39:40,670 | INFO     | ***************************************
[2026-04-30 04:40:45] 2026-04-30 02:39:40,670 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 04:40:45] 2026-04-30 02:39:40,670 | INFO     | ***************************************
[2026-04-30 04:40:45] 2026-04-30 02:39:40,670 | INFO     | 
[2026-04-30 04:40:45] 2026-04-30 02:39:40,671 | INFO     | pilot is running in a VM
[2026-04-30 04:40:45] 2026-04-30 02:39:40,671 | INFO     | architecture information:
[2026-04-30 04:40:45] 2026-04-30 02:39:40,676 | INFO     | executing command: cat /etc/os-release
[2026-04-30 04:40:45] 2026-04-30 02:39:40,913 | INFO     | cat /etc/os-release:
[2026-04-30 04:40:45] NAME="CentOS Linux"
[2026-04-30 04:40:45] VERSION="7 (Core)"
[2026-04-30 04:40:45] ID="centos"
[2026-04-30 04:40:45] ID_LIKE="rhel fedora"
[2026-04-30 04:40:45] VERSION_ID="7"
[2026-04-30 04:40:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 04:40:45] ANSI_COLOR="0;31"
[2026-04-30 04:40:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 04:40:45] HOME_URL="https://www.centos.org/"
[2026-04-30 04:40:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 04:40:45] 
[2026-04-30 04:40:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 04:40:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 04:40:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 04:40:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 04:40:45] 
[2026-04-30 04:40:45] 2026-04-30 02:39:40,913 | INFO     | ***************************************
[2026-04-30 04:40:45] 2026-04-30 02:39:41,417 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-30 04:40:45] 2026-04-30 02:39:41,638 | INFO     | sufficient remaining disk space (497306042368 B)
[2026-04-30 04:40:45] 2026-04-30 02:39:41,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 04:40:45] 2026-04-30 02:39:41,639 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 04:40:45] 2026-04-30 02:39:41,639 | INFO     | update_server=False
[2026-04-30 04:40:45] 2026-04-30 02:39:41,639 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 04:40:45] 2026-04-30 02:39:41,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 04:40:45] 2026-04-30 02:39:41,640 | INFO     | aborting loop
[2026-04-30 04:40:45] 2026-04-30 02:39:41,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 04:40:45] 2026-04-30 02:39:42,359 | INFO     | all data control threads have been joined
[2026-04-30 04:40:45] 2026-04-30 02:39:42,644 | INFO     | [job] retrieve thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:42,645 | INFO     | [job] job monitor thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:42,672 | INFO     | all job control threads have been joined
[2026-04-30 04:40:45] 2026-04-30 02:39:42,770 | INFO     | [payload] failed_post thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:42,974 | INFO     | [payload] validate_post thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,137 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,139 | INFO     | [data] copytool_in thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,140 | INFO     | all payload control threads have been joined
[2026-04-30 04:40:45] 2026-04-30 02:39:43,228 | INFO     | [job] validate thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,365 | INFO     | [data] control thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,646 | INFO     | [data] copytool_out thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,678 | INFO     | [job] control thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,742 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,754 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:43,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 04:40:45] 2026-04-30 02:39:43,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 04:40:45] 2026-04-30 02:39:44,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:44,146 | INFO     | [payload] control thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:44,881 | INFO     | [job] queue monitor thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:39:47,850 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 04:40:45] 2026-04-30 02:40:11,470 | INFO     | PID=7227 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-30 04:40:45] 2026-04-30 02:40:11,470 | INFO     | .. there are 2 such processes running
[2026-04-30 04:40:45] 2026-04-30 02:40:11,477 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 04:40:45] 2026-04-30 02:40:11,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 04:40:45] 2026-04-30 02:40:11,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 04:40:45] 2026-04-30 02:40:34,727 | INFO     | [monitor] cgroup control has ended
[2026-04-30 04:40:45] 2026-04-30 02:40:35,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528706692928)>', '<ExcThread(monitor, started 140527831869184)>']
[2026-04-30 04:40:45] 2026-04-30 02:40:35,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 04:40:45] 2026-04-30 02:40:35,623 | INFO     | [monitor] control thread has ended
[2026-04-30 04:40:45] 2026-04-30 02:40:40,154 | INFO     | all workflow threads have been joined
[2026-04-30 04:40:45] 2026-04-30 02:40:40,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 04:40:45] 2026-04-30 02:40:40,155 | INFO     | traces error code: 0
[2026-04-30 04:40:45] 2026-04-30 02:40:40,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 04:40:45] 2026-04-30 02:40:40,618 [wrapper] ==== pilot stdout END ====
[2026-04-30 04:40:45] 2026-04-30 02:40:40,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 04:40:45] 2026-04-30 02:40:40,847 [wrapper] pilotpid: 7227
[2026-04-30 04:40:45] 2026-04-30 02:40:40,896 [wrapper] Pilot exit status: 0
[2026-04-30 04:40:45] 2026-04-30 02:40:41,416 [wrapper] pandaids: 7118493810
[2026-04-30 04:40:45] 2026-04-30 02:40:42,464 [wrapper] cleanup supervisor_pilot 20048 7228
[2026-04-30 04:40:45] 2026-04-30 02:40:42,560 [wrapper] Test setup, not cleaning
[2026-04-30 04:40:45] 2026-04-30 02:40:42,664 [wrapper] apfmon messages muted
[2026-04-30 04:40:45] 2026-04-30 02:40:42,756 [wrapper] ==== wrapper stdout END ====
[2026-04-30 04:40:45] 2026-04-30 02:40:42,855 [wrapper] ==== wrapper stderr END ====
[2026-04-30 04:40:45]  *** Error codes and diagnostics ***
[2026-04-30 04:40:45]     "exeErrorCode": 0,
[2026-04-30 04:40:45]     "pilotErrorCode": 0,
[2026-04-30 04:40:45]  *** Listing of results directory ***
[2026-04-30 04:40:45] total 482964
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc    683926 Apr 29 14:00 pilot3.tar.gz
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc      5631 Apr 29 14:03 queuedata.json
[2026-04-30 04:40:45] -rwx------. 1 boinc boinc     36322 Apr 29 14:04 runpilot2-wrapper.sh
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc       100 Apr 29 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 04:40:45] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 22:07 run_atlas
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc       105 Apr 29 22:07 job.xml
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc 261223435 Apr 29 22:07 EVNT.49863848._000169.pool.root.1
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc      6306 Apr 29 22:07 init_data.xml
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc     15667 Apr 29 22:07 start_atlas.sh
[2026-04-30 04:40:45] drwxrwx--x. 2 boinc boinc        68 Apr 29 22:07 shared
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc    697435 Apr 29 22:07 input.tar.gz
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc         0 Apr 29 22:07 boinc_lockfile
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc      2650 Apr 29 22:07 pandaJob.out
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc       415 Apr 29 22:13 workernode_map.json
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc   1001909 Apr 29 22:13 agis_schedconf.cvmfs.json
[2026-04-30 04:40:45] drwx------. 5 boinc boinc      4096 Apr 29 22:13 pilot3
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc 224046977 Apr 30 04:37 HITS.49863851._004216.pool.root.1
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc       488 Apr 30 04:38 boinc_task_state.xml
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc      1011 Apr 30 04:39 memory_monitor_summary.json
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc   1512704 Apr 30 04:39 agis_ddmendpoints.agis.ALL.json
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc    461906 Apr 30 04:39 log.49863851._004216.job.log.tgz.1
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc      6336 Apr 30 04:39 heartbeat_new.json
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc      6227 Apr 30 04:39 heartbeat.json
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc        95 Apr 30 04:40 pilot_heartbeat.json
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc      8192 Apr 30 04:40 boinc_mmap_file
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc        28 Apr 30 04:40 wrapper_checkpoint.txt
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc      4882 Apr 30 04:40 pilotlog.txt
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc   2119950 Apr 30 04:40 log.49863851._004216.job.log.1
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc       357 Apr 30 04:40 output.list
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc       410 Apr 30 04:40 runtime_log
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc   2600960 Apr 30 04:40 result.tar.gz
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc      8439 Apr 30 04:40 runtime_log.err
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc       656 Apr 30 04:40 f3b016ea09ab.diag
[2026-04-30 04:40:45] -rw-r--r--. 1 boinc boinc     20465 Apr 30 04:40 stderr.txt
[2026-04-30 04:40:45] HITS file was successfully produced:
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc 224046977 Apr 30 04:37 shared/HITS.pool.root.1
[2026-04-30 04:40:45]  *** Contents of shared directory: ***
[2026-04-30 04:40:45] total 477140
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc 261223435 Apr 29 22:07 ATLAS.root_0
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc     15667 Apr 29 22:07 start_atlas.sh
[2026-04-30 04:40:45] -rw-r--r--. 2 boinc boinc    697435 Apr 29 22:07 input.tar.gz
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc 224046977 Apr 30 04:37 HITS.pool.root.1
[2026-04-30 04:40:45] -rw-------. 1 boinc boinc   2600960 Apr 30 04:40 result.tar.gz
04:40:47 (3248): run_atlas exited; CPU time 87442.886338
04:40:47 (3248): called boinc_finish(0)

</stderr_txt>
]]>

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