Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:07 (2680143): wrapper (7.7.26015): starting
07:47:07 (2680143): wrapper: running run_atlas (--nthreads 9)
[2026-04-29 07:47:07] Arguments: --nthreads 9
[2026-04-29 07:47:07] Threads: 9
[2026-04-29 07:47:07] Checking for CVMFS
[2026-04-29 07:47:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 07:47:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 07:47:07] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 07:47:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 07:47:09] 2.13.3.0 4156 154859 1007904 159005 2 268 26288769 32935937 55762 16776704 0 1400529481 99.767 824971338 27145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-29 07:47:09] CVMFS is ok
[2026-04-29 07:47:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 07:47:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 07:47:09] Further information can be found at the LHC@home message board.
[2026-04-29 07:47:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 07:47:09] Checking for apptainer binary...
[2026-04-29 07:47:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 07:47:09] Running /usr/bin/apptainer --version
[2026-04-29 07:47:09] apptainer version 1.4.5-3.el9
[2026-04-29 07:47:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 07:47:10] lc-10-10.aglt2.org
[2026-04-29 07:47:10] apptainer works
[2026-04-29 07:47:10] Set ATHENA_PROC_NUMBER=9
[2026-04-29 07:47:10] Set ATHENA_CORE_NUMBER=9
[2026-04-29 07:47:10] Starting ATLAS job with PandaID=7118229811
[2026-04-29 07:47:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 16:50:31]  *** The last 200 lines of the pilot log: ***
[2026-04-29 16:50:31] 2026-04-29 20:49:08,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,159 | INFO     | log transfer has been attempted: DONE
[2026-04-29 16:50:31] 2026-04-29 20:49:08,159 | INFO     | job 7118229811 has finished - writing final server update
[2026-04-29 16:50:31] 2026-04-29 20:49:08,159 | INFO     | total number of processed events: 400 (read)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,304 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7118229811/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,304 | INFO     | extracted standard info from prmon json
[2026-04-29 16:50:31] 2026-04-29 20:49:08,304 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 16:50:31] 2026-04-29 20:49:08,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 16:50:31] 2026-04-29 20:49:08,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 16:50:31] 2026-04-29 20:49:08,339 | INFO     | fitting pss+swap vs Time
[2026-04-29 16:50:31] 2026-04-29 20:49:08,340 | INFO     | sum of square deviations: 46163321429.252686
[2026-04-29 16:50:31] 2026-04-29 20:49:08,352 | INFO     | sum of deviations: 172809582024.84134
[2026-04-29 16:50:31] 2026-04-29 20:49:08,352 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,375 | INFO     | mean y: 2561408.271698113
[2026-04-29 16:50:31] 2026-04-29 20:49:08,375 | INFO     | intersect: 2561408.271698113
[2026-04-29 16:50:31] 2026-04-29 20:49:08,376 | INFO     | chi2: 3.8515362496389027
[2026-04-29 16:50:31] 2026-04-29 20:49:08,377 | INFO     | sum of square deviations: 44869075674.95237
[2026-04-29 16:50:31] 2026-04-29 20:49:08,406 | INFO     | sum of deviations: 239715102452.90442
[2026-04-29 16:50:31] 2026-04-29 20:49:08,406 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,406 | INFO     | mean y: 2569245.019047619
[2026-04-29 16:50:31] 2026-04-29 20:49:08,453 | INFO     | intersect: 2569245.019047619
[2026-04-29 16:50:31] 2026-04-29 20:49:08,454 | INFO     | chi2: 2.4596887301194927
[2026-04-29 16:50:31] 2026-04-29 20:49:08,454 | INFO     | current chi2=2.4596887301194927 (change=36.137463840562354 %)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,455 | INFO     | sum of square deviations: 43599185053.9828
[2026-04-29 16:50:31] 2026-04-29 20:49:08,525 | INFO     | sum of deviations: 236523296525.8055
[2026-04-29 16:50:31] 2026-04-29 20:49:08,525 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,525 | INFO     | mean y: 2568861.698076923
[2026-04-29 16:50:31] 2026-04-29 20:49:08,525 | INFO     | intersect: 2568861.698076923
[2026-04-29 16:50:31] 2026-04-29 20:49:08,526 | INFO     | chi2: 2.459626385775886
[2026-04-29 16:50:31] 2026-04-29 20:49:08,526 | INFO     | current chi2=2.459626385775886 (change=0.002534643625566289 %)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,526 | INFO     | right removable region: 519
[2026-04-29 16:50:31] 2026-04-29 20:49:08,527 | INFO     | sum of square deviations: 44869040051.531265
[2026-04-29 16:50:31] 2026-04-29 20:49:08,582 | INFO     | sum of deviations: 40865460035.605804
[2026-04-29 16:50:31] 2026-04-29 20:49:08,582 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,582 | INFO     | mean y: 2576925.499047619
[2026-04-29 16:50:31] 2026-04-29 20:49:08,582 | INFO     | intersect: 2576925.499047619
[2026-04-29 16:50:31] 2026-04-29 20:49:08,583 | INFO     | chi2: 1.5550403902103722
[2026-04-29 16:50:31] 2026-04-29 20:49:08,583 | INFO     | current chi2=1.5550403902103722 (change=59.62545100396851 %)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,584 | INFO     | sum of square deviations: 43599209882.73086
[2026-04-29 16:50:31] 2026-04-29 20:49:08,661 | INFO     | sum of deviations: 8682979376.019157
[2026-04-29 16:50:31] 2026-04-29 20:49:08,661 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,661 | INFO     | mean y: 2580786.4134615385
[2026-04-29 16:50:31] 2026-04-29 20:49:08,661 | INFO     | intersect: 2580786.4134615385
[2026-04-29 16:50:31] 2026-04-29 20:49:08,662 | INFO     | chi2: 1.43920602110392
[2026-04-29 16:50:31] 2026-04-29 20:49:08,662 | INFO     | current chi2=1.43920602110392 (change=7.448962087137925 %)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,662 | INFO     | left removable region: 10
[2026-04-29 16:50:31] 2026-04-29 20:49:08,663 | INFO     | sum of square deviations: 40890344205.92541
[2026-04-29 16:50:31] 2026-04-29 20:49:08,726 | INFO     | sum of deviations: 73979188416.62283
[2026-04-29 16:50:31] 2026-04-29 20:49:08,726 | INFO     | mean x (centered): 0.0
[2026-04-29 16:50:31] 2026-04-29 20:49:08,726 | INFO     | mean y: 2588726.9469548133
[2026-04-29 16:50:31] 2026-04-29 20:49:08,727 | INFO     | intersect: 2588726.9469548133
[2026-04-29 16:50:31] 2026-04-29 20:49:08,727 | INFO     | chi2: 0.027754619978692777
[2026-04-29 16:50:31] 2026-04-29 20:49:08,728 | INFO     | current memory leak: 1.81 B/s (using 509 data points, chi2=0.03)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,728 | INFO     | could have reported an average CPU frequency of 2805 MHz (21 samples)
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | ..............................
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . Timing measurements:
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . get job = 1 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . initial setup = 41 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . payload setup = 51 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . stage-in = 0 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,729 | INFO     | . payload execution = 32322 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,751 | INFO     | . stage-out = 5 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,751 | INFO     | . log creation = 0 s
[2026-04-29 16:50:31] 2026-04-29 20:49:08,751 | INFO     | ..............................
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | 
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | job summary report
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | --------------------------------------------------
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | PanDA job id: 7118229811
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | task id: 49863851
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | errors: (none)
[2026-04-29 16:50:31] 2026-04-29 20:49:09,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | pilot state: finished 
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | transexitcode: 0
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | exeerrorcode: 0
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | exeerrordiag: 
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | exitcode: 0
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | exitmsg: OK
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | cpuconsumptiontime: 68193 s
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | nevents: 400
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | neventsw: 0
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | pid: 2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | pgrp: 2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:09,478 | INFO     | corecount: 9
[2026-04-29 16:50:31] 2026-04-29 20:49:09,479 | INFO     | event service: False
[2026-04-29 16:50:31] 2026-04-29 20:49:09,479 | INFO     | sizes: {0: 2280680, 1: 2280736, 2: 2280792, 3: 2282621, 14: 2282621, 32380: 2321357, 32386: 2330355, 32388: 2330411, 32392: 2330605}
[2026-04-29 16:50:31] 2026-04-29 20:49:09,479 | INFO     | --------------------------------------------------
[2026-04-29 16:50:31] 2026-04-29 20:49:09,479 | INFO     | 
[2026-04-29 16:50:31] 2026-04-29 20:49:09,479 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-29 16:50:31] 2026-04-29 20:49:09,577 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,577 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,577 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,577 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,578 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 16:50:31] 2026-04-29 20:49:09,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,583 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 16:50:31] 2026-04-29 20:49:09,583 | INFO     | job 7118229811 has completed (purged errors)
[2026-04-29 16:50:31] 2026-04-29 20:49:09,583 | INFO     | overall cleanup function is called
[2026-04-29 16:50:31] 2026-04-29 20:49:10,648 | INFO     | --- collectZombieJob: --- 10, [2706277]
[2026-04-29 16:50:31] 2026-04-29 20:49:10,648 | INFO     | zombie collector waiting for pid 2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:10,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 16:50:31] 2026-04-29 20:49:10,648 | INFO     | collected zombie processes
[2026-04-29 16:50:31] 2026-04-29 20:49:10,648 | INFO     | will attempt to kill all subprocesses of pid=2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:15,822 | INFO     | process IDs to be killed: [2706277] (in reverse order)
[2026-04-29 16:50:31] 2026-04-29 20:49:16,207 | INFO     | PID=2690391 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-29 16:50:31] 2026-04-29 20:49:16,207 | INFO     | .. there are 94 such processes running
[2026-04-29 16:50:31] 2026-04-29 20:49:16,789 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 16:50:31] 2026-04-29 20:49:16,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 16:50:31] 2026-04-29 20:49:16,889 | INFO     | did not find any defunct processes belonging to 2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:16,920 | INFO     | did not find any defunct processes belonging to 2706277
[2026-04-29 16:50:31] 2026-04-29 20:49:16,920 | INFO     | Ready for new job
[2026-04-29 16:50:31] 2026-04-29 20:49:16,923 | INFO     | ***************************************
[2026-04-29 16:50:31] 2026-04-29 20:49:16,923 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 16:50:31] 2026-04-29 20:49:16,923 | INFO     | ***************************************
[2026-04-29 16:50:31] 2026-04-29 20:49:16,923 | INFO     | 
[2026-04-29 16:50:31] 2026-04-29 20:49:16,928 | INFO     | architecture information:
[2026-04-29 16:50:31] 2026-04-29 20:49:16,929 | INFO     | executing command: cat /etc/os-release
[2026-04-29 16:50:31] 2026-04-29 20:49:17,006 | INFO     | cat /etc/os-release:
[2026-04-29 16:50:31] NAME="CentOS Linux"
[2026-04-29 16:50:31] VERSION="7 (Core)"
[2026-04-29 16:50:31] ID="centos"
[2026-04-29 16:50:31] ID_LIKE="rhel fedora"
[2026-04-29 16:50:31] VERSION_ID="7"
[2026-04-29 16:50:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 16:50:31] ANSI_COLOR="0;31"
[2026-04-29 16:50:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 16:50:31] HOME_URL="https://www.centos.org/"
[2026-04-29 16:50:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 16:50:31] 
[2026-04-29 16:50:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 16:50:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 16:50:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 16:50:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 16:50:31] 
[2026-04-29 16:50:31] 2026-04-29 20:49:17,006 | INFO     | ***************************************
[2026-04-29 16:50:31] 2026-04-29 20:49:17,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-29 16:50:31] 2026-04-29 20:49:17,600 | INFO     | sufficient remaining disk space (93966041088 B)
[2026-04-29 16:50:31] 2026-04-29 20:49:17,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | INFO     | update_server=False
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 16:50:31] 2026-04-29 20:49:17,601 | INFO     | aborting loop
[2026-04-29 16:50:31] 2026-04-29 20:49:17,618 | INFO     | all data control threads have been joined
[2026-04-29 16:50:31] 2026-04-29 20:49:17,987 | INFO     | all job control threads have been joined
[2026-04-29 16:50:31] 2026-04-29 20:49:18,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 16:50:31] 2026-04-29 20:49:18,607 | INFO     | [job] retrieve thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:18,611 | INFO     | [job] job monitor thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:18,624 | INFO     | [data] control thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:18,800 | INFO     | all payload control threads have been joined
[2026-04-29 16:50:31] 2026-04-29 20:49:18,876 | INFO     | [job] validate thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:18,993 | INFO     | [job] control thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,039 | INFO     | [payload] failed_post thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,134 | INFO     | [data] copytool_in thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,160 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,311 | INFO     | [job] queue monitor thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,608 | INFO     | [data] copytool_out thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,806 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,810 | INFO     | [payload] control thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:19,884 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:20,095 | INFO     | [payload] validate_post thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:21,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 16:50:31] 2026-04-29 20:49:25,069 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 16:50:31] 2026-04-29 20:49:53,700 | INFO     | PID=2690391 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 16:50:31] 2026-04-29 20:49:53,700 | INFO     | .. there are 94 such processes running
[2026-04-29 16:50:31] 2026-04-29 20:49:53,701 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 16:50:31] 2026-04-29 20:49:53,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 16:50:31] 2026-04-29 20:49:53,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 16:50:31] 2026-04-29 20:50:03,153 | INFO     | [monitor] cgroup control has ended
[2026-04-29 16:50:31] 2026-04-29 20:50:04,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625346398016)>', '<ExcThread(monitor, started 139624974358272)>']
[2026-04-29 16:50:31] 2026-04-29 20:50:04,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 16:50:31] 2026-04-29 20:50:04,770 | INFO     | [monitor] control thread has ended
[2026-04-29 16:50:31] 2026-04-29 20:50:09,608 | INFO     | all workflow threads have been joined
[2026-04-29 16:50:31] 2026-04-29 20:50:09,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 16:50:31] 2026-04-29 20:50:09,608 | INFO     | traces error code: 0
[2026-04-29 16:50:31] 2026-04-29 20:50:09,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 16:50:31] 2026-04-29 20:50:10,075 [wrapper] ==== pilot stdout END ====
[2026-04-29 16:50:31] 2026-04-29 20:50:10,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 16:50:31] 2026-04-29 20:50:10,100 [wrapper] pilotpid: 2690391
[2026-04-29 16:50:31] 2026-04-29 20:50:10,104 [wrapper] Pilot exit status: 0
[2026-04-29 16:50:31] 2026-04-29 20:50:10,157 [wrapper] pandaids: 7118229811
[2026-04-29 16:50:31] 2026-04-29 20:50:10,332 [wrapper] cleanup supervisor_pilot 1982042 2690393
[2026-04-29 16:50:31] 2026-04-29 20:50:10,335 [wrapper] Test setup, not cleaning
[2026-04-29 16:50:31] 2026-04-29 20:50:10,338 [wrapper] apfmon messages muted
[2026-04-29 16:50:31] 2026-04-29 20:50:10,340 [wrapper] ==== wrapper stdout END ====
[2026-04-29 16:50:31] 2026-04-29 20:50:10,345 [wrapper] ==== wrapper stderr END ====
[2026-04-29 16:50:31]  *** Error codes and diagnostics ***
[2026-04-29 16:50:31]     "exeErrorCode": 0,
[2026-04-29 16:50:31]     "pilotErrorCode": 0,
[2026-04-29 16:50:31]  *** Listing of results directory ***
[2026-04-29 16:50:31] total 479120
[2026-04-29 16:50:31] -rwx------. 1 boincer umatlas     36322 Apr 28 21:45 runpilot2-wrapper.sh
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas    683926 Apr 29 07:16 pilot3.tar.gz
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas      5631 Apr 29 07:23 queuedata.json
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas       100 Apr 29 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 16:50:31] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 07:47 run_atlas
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas       105 Apr 29 07:47 job.xml
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas 260182976 Apr 29 07:47 EVNT.49863848._000098.pool.root.1
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 07:47 start_atlas.sh
[2026-04-29 16:50:31] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 07:47 shared
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas    697435 Apr 29 07:47 input.tar.gz
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas         0 Apr 29 07:47 boinc_lockfile
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas      2649 Apr 29 07:47 pandaJob.out
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas        57 Apr 29 07:47 setup.sh.local
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas   1001891 Apr 29 07:48 agis_schedconf.cvmfs.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas       437 Apr 29 07:48 workernode_map.json
[2026-04-29 16:50:31] drwx------. 5 boincer umatlas      4096 Apr 29 07:49 pilot3
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas      6782 Apr 29 16:46 init_data.xml
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas 220642890 Apr 29 16:47 HITS.49863851._002442.pool.root.1
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas       488 Apr 29 16:47 boinc_task_state.xml
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas      1046 Apr 29 16:48 memory_monitor_summary.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas   1512704 Apr 29 16:49 agis_ddmendpoints.agis.ALL.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas    528550 Apr 29 16:49 log.49863851._002442.job.log.tgz.1
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas        95 Apr 29 16:49 pilot_heartbeat.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas      6408 Apr 29 16:49 heartbeat_new.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas      6299 Apr 29 16:49 heartbeat.json
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas      4823 Apr 29 16:50 pilotlog.txt
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas   2295029 Apr 29 16:50 log.49863851._002442.job.log.1
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas       357 Apr 29 16:50 output.list
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas       410 Apr 29 16:50 runtime_log
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas   2836480 Apr 29 16:50 result.tar.gz
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas       657 Apr 29 16:50 62ce5f9e26a0.diag
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas      8965 Apr 29 16:50 runtime_log.err
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 16:50 boinc_mmap_file
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas        28 Apr 29 16:50 wrapper_checkpoint.txt
[2026-04-29 16:50:31] -rw-r--r--. 1 boincer umatlas     21154 Apr 29 16:50 stderr.txt
[2026-04-29 16:50:31] HITS file was successfully produced:
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas 220642890 Apr 29 16:47 shared/HITS.pool.root.1
[2026-04-29 16:50:31]  *** Contents of shared directory: ***
[2026-04-29 16:50:31] total 473040
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas 260182976 Apr 29 07:47 ATLAS.root_0
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas     15667 Apr 29 07:47 start_atlas.sh
[2026-04-29 16:50:31] -rw-r--r--. 2 boincer umatlas    697435 Apr 29 07:47 input.tar.gz
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas 220642890 Apr 29 16:47 HITS.pool.root.1
[2026-04-29 16:50:31] -rw-------. 1 boincer umatlas   2836480 Apr 29 16:50 result.tar.gz
16:50:33 (2680143): run_atlas exited; CPU time 70265.496615
16:50:33 (2680143): called boinc_finish(0)

</stderr_txt>
]]>

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