Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:28:34 (3153567): wrapper (7.7.26015): starting
22:28:34 (3153567): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 22:28:34] Arguments: --nthreads 4
[2026-05-01 22:28:34] Threads: 4
[2026-05-01 22:28:34] Checking for CVMFS
[2026-05-01 22:28:34] No cvmfs_config command found, will try listing directly
[2026-05-01 22:28:34] CVMFS is ok
[2026-05-01 22:28:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 22:28:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 22:28:34] Further information can be found at the LHC@home message board.
[2026-05-01 22:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 22:28:34] Checking for apptainer binary...
[2026-05-01 22:28:34] which: no apptainer in ((null))
[2026-05-01 22:28:34] apptainer is not installed, using version from CVMFS
[2026-05-01 22:28:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 22:28:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/13/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-05-01 22:28:34] apptainer works
[2026-05-01 22:28:34] Set ATHENA_PROC_NUMBER=4
[2026-05-01 22:28:34] Set ATHENA_CORE_NUMBER=4
[2026-05-01 22:28:34] Starting ATLAS job with PandaID=7118229705
[2026-05-01 22:28:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 03:45:47]  *** The last 200 lines of the pilot log: ***
[2026-05-02 03:45:47] 2026-05-02 01:44:48,958 | INFO     | monitor loop #1245: job 0:7118229705 is in state 'finished'
[2026-05-02 03:45:47] 2026-05-02 01:44:48,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 03:45:47] 2026-05-02 01:44:48,982 | INFO     | job 7118229705 has state=finished
[2026-05-02 03:45:47] 2026-05-02 01:44:48,983 | INFO     | preparing for final server update for job 7118229705 in state='finished'
[2026-05-02 03:45:47] 2026-05-02 01:44:48,983 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/13/PanDA_Pilot-7118229705/jobReport.json
[2026-05-02 03:45:47] 2026-05-02 01:44:48,985 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/13/workernode_map.json
[2026-05-02 03:45:47] 2026-05-02 01:44:48,986 | INFO     | this job has now completed (state=finished)
[2026-05-02 03:45:47] 2026-05-02 01:44:48,986 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 03:45:47] 2026-05-02 01:44:48,986 | INFO     | log transfer has been attempted: DONE
[2026-05-02 03:45:47] 2026-05-02 01:44:48,986 | INFO     | job 7118229705 has finished - writing final server update
[2026-05-02 03:45:47] 2026-05-02 01:44:48,986 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_776954/.job.ad'
[2026-05-02 03:45:47] 2026-05-02 01:44:48,987 | INFO     | total number of processed events: 400 (read)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,015 | INFO     | using path: /var/lib/boinc/var/slot68/slots/13/PanDA_Pilot-7118229705/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,016 | INFO     | extracted standard info from prmon json
[2026-05-02 03:45:47] 2026-05-02 01:44:49,016 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 03:45:47] 2026-05-02 01:44:49,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 03:45:47] 2026-05-02 01:44:49,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 03:45:47] 2026-05-02 01:44:49,022 | INFO     | fitting pss+swap vs Time
[2026-05-02 03:45:47] 2026-05-02 01:44:49,022 | INFO     | sum of square deviations: 9237608475.496698
[2026-05-02 03:45:47] 2026-05-02 01:44:49,025 | INFO     | sum of deviations: 15842245241.625816
[2026-05-02 03:45:47] 2026-05-02 01:44:49,025 | INFO     | mean x (centered): 0.0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,025 | INFO     | mean y: 2342641.374193548
[2026-05-02 03:45:47] 2026-05-02 01:44:49,026 | INFO     | intersect: 2342641.374193548
[2026-05-02 03:45:47] 2026-05-02 01:44:49,026 | INFO     | chi2: 1.5343282201739528
[2026-05-02 03:45:47] 2026-05-02 01:44:49,026 | INFO     | sum of square deviations: 8797795882.996689
[2026-05-02 03:45:47] 2026-05-02 01:44:49,029 | INFO     | sum of deviations: 15516764421.507994
[2026-05-02 03:45:47] 2026-05-02 01:44:49,029 | INFO     | mean x (centered): 0.0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,029 | INFO     | mean y: 2342528.4918032787
[2026-05-02 03:45:47] 2026-05-02 01:44:49,029 | INFO     | intersect: 2342528.4918032787
[2026-05-02 03:45:47] 2026-05-02 01:44:49,030 | INFO     | chi2: 1.5346383313036802
[2026-05-02 03:45:47] 2026-05-02 01:44:49,030 | INFO     | current chi2=1.5346383313036802 (change=-0.020211524864757704 %)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,030 | INFO     | right removable region: 304
[2026-05-02 03:45:47] 2026-05-02 01:44:49,031 | INFO     | sum of square deviations: 8797795272.996689
[2026-05-02 03:45:47] 2026-05-02 01:44:49,033 | INFO     | sum of deviations: -28590529887.491745
[2026-05-02 03:45:47] 2026-05-02 01:44:49,033 | INFO     | mean x (centered): 0.0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,034 | INFO     | mean y: 2357931.4918032787
[2026-05-02 03:45:47] 2026-05-02 01:44:49,034 | INFO     | intersect: 2357931.4918032787
[2026-05-02 03:45:47] 2026-05-02 01:44:49,034 | INFO     | chi2: 0.049748460015468336
[2026-05-02 03:45:47] 2026-05-02 01:44:49,034 | INFO     | current chi2=0.049748460015468336 (change=96.75763898745028 %)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,035 | INFO     | sum of square deviations: 8372168382.996668
[2026-05-02 03:45:47] 2026-05-02 01:44:49,037 | INFO     | sum of deviations: -24425855319.453312
[2026-05-02 03:45:47] 2026-05-02 01:44:49,037 | INFO     | mean x (centered): 0.0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,037 | INFO     | mean y: 2356432.453333333
[2026-05-02 03:45:47] 2026-05-02 01:44:49,037 | INFO     | intersect: 2356432.453333333
[2026-05-02 03:45:47] 2026-05-02 01:44:49,038 | INFO     | chi2: 0.04368903062972324
[2026-05-02 03:45:47] 2026-05-02 01:44:49,038 | INFO     | current chi2=0.04368903062972324 (change=12.180134588811452 %)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,038 | INFO     | left removable region: 10
[2026-05-02 03:45:47] 2026-05-02 01:44:49,038 | INFO     | sum of square deviations: 7879815331.496607
[2026-05-02 03:45:47] 2026-05-02 01:44:49,041 | INFO     | sum of deviations: -24029478564.891148
[2026-05-02 03:45:47] 2026-05-02 01:44:49,041 | INFO     | mean x (centered): 0.0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,041 | INFO     | mean y: 2356579.8911564625
[2026-05-02 03:45:47] 2026-05-02 01:44:49,041 | INFO     | intersect: 2356579.8911564625
[2026-05-02 03:45:47] 2026-05-02 01:44:49,041 | INFO     | chi2: 0.043256918227651764
[2026-05-02 03:45:47] 2026-05-02 01:44:49,042 | INFO     | current memory leak: -3.05 B/s (using 294 data points, chi2=0.04)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,042 | INFO     | could have reported an average CPU frequency of 1995 MHz (14 samples)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,042 | INFO     | ..............................
[2026-05-02 03:45:47] 2026-05-02 01:44:49,042 | INFO     | . Timing measurements:
[2026-05-02 03:45:47] 2026-05-02 01:44:49,042 | INFO     | . get job = 0 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . initial setup = 12 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . payload setup = 25 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . stage-in = 0 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . payload execution = 18902 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . stage-out = 1 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | . log creation = 0 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,043 | INFO     | ..............................
[2026-05-02 03:45:47] 2026-05-02 01:44:49,137 | INFO     | 
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | job summary report
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | --------------------------------------------------
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | PanDA job id: 7118229705
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | task id: 49863752
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | errors: (none)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | pilot state: finished 
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | transexitcode: 0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | exeerrorcode: 0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,138 | INFO     | exeerrordiag: 
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | exitcode: 0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | exitmsg: OK
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | cpuconsumptiontime: 70795 s
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | nevents: 400
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | neventsw: 0
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | pid: 3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | pgrp: 3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | corecount: 4
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | event service: False
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | sizes: {0: 2275383, 1: 2277212, 18931: 2310577, 18932: 2319599, 18935: 2319683, 18937: 2319877}
[2026-05-02 03:45:47] 2026-05-02 01:44:49,139 | INFO     | --------------------------------------------------
[2026-05-02 03:45:47] 2026-05-02 01:44:49,140 | INFO     | 
[2026-05-02 03:45:47] 2026-05-02 01:44:49,140 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/13
[2026-05-02 03:45:47] 2026-05-02 01:44:49,173 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | job 7118229705 has completed (purged errors)
[2026-05-02 03:45:47] 2026-05-02 01:44:49,175 | INFO     | overall cleanup function is called
[2026-05-02 03:45:47] 2026-05-02 01:44:50,184 | INFO     | --- collectZombieJob: --- 10, [3170355]
[2026-05-02 03:45:47] 2026-05-02 01:44:50,184 | INFO     | zombie collector waiting for pid 3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:50,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 03:45:47] 2026-05-02 01:44:50,185 | INFO     | collected zombie processes
[2026-05-02 03:45:47] 2026-05-02 01:44:50,185 | INFO     | will attempt to kill all subprocesses of pid=3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:50,913 | INFO     | process IDs to be killed: [3170355] (in reverse order)
[2026-05-02 03:45:47] 2026-05-02 01:44:51,267 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 03:45:47] 2026-05-02 01:44:51,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 03:45:47] 2026-05-02 01:44:51,299 | INFO     | did not find any defunct processes belonging to 3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:51,329 | INFO     | did not find any defunct processes belonging to 3170355
[2026-05-02 03:45:47] 2026-05-02 01:44:51,329 | INFO     | Ready for new job
[2026-05-02 03:45:47] 2026-05-02 01:44:51,331 | INFO     | ***************************************
[2026-05-02 03:45:47] 2026-05-02 01:44:51,331 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 03:45:47] 2026-05-02 01:44:51,332 | INFO     | ***************************************
[2026-05-02 03:45:47] 2026-05-02 01:44:51,332 | INFO     | 
[2026-05-02 03:45:47] 2026-05-02 01:44:51,340 | INFO     | architecture information:
[2026-05-02 03:45:47] 2026-05-02 01:44:51,340 | INFO     | executing command: cat /etc/os-release
[2026-05-02 03:45:47] 2026-05-02 01:44:51,370 | INFO     | cat /etc/os-release:
[2026-05-02 03:45:47] NAME="CentOS Linux"
[2026-05-02 03:45:47] VERSION="7 (Core)"
[2026-05-02 03:45:47] ID="centos"
[2026-05-02 03:45:47] ID_LIKE="rhel fedora"
[2026-05-02 03:45:47] VERSION_ID="7"
[2026-05-02 03:45:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 03:45:47] ANSI_COLOR="0;31"
[2026-05-02 03:45:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 03:45:47] HOME_URL="https://www.centos.org/"
[2026-05-02 03:45:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 03:45:47] 
[2026-05-02 03:45:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 03:45:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 03:45:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 03:45:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 03:45:47] 
[2026-05-02 03:45:47] 2026-05-02 01:44:51,370 | INFO     | ***************************************
[2026-05-02 03:45:47] 2026-05-02 01:44:51,873 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/13
[2026-05-02 03:45:47] 2026-05-02 01:44:51,903 | INFO     | sufficient remaining disk space (164968267776 B)
[2026-05-02 03:45:47] 2026-05-02 01:44:51,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 03:45:47] 2026-05-02 01:44:51,903 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 03:45:47] 2026-05-02 01:44:51,904 | INFO     | update_server=False
[2026-05-02 03:45:47] 2026-05-02 01:44:51,904 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 03:45:47] 2026-05-02 01:44:51,949 | INFO     | all payload control threads have been joined
[2026-05-02 03:45:47] 2026-05-02 01:44:52,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 03:45:47] 2026-05-02 01:44:52,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 03:45:47] 2026-05-02 01:44:52,466 | INFO     | aborting loop
[2026-05-02 03:45:47] 2026-05-02 01:44:52,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 03:45:47] 2026-05-02 01:44:52,848 | INFO     | all data control threads have been joined
[2026-05-02 03:45:47] 2026-05-02 01:44:52,908 | INFO     | [job] retrieve thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:52,911 | INFO     | all job control threads have been joined
[2026-05-02 03:45:47] 2026-05-02 01:44:52,954 | INFO     | [payload] control thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,043 | INFO     | [job] validate thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,204 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,471 | INFO     | [job] job monitor thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,853 | INFO     | [data] control thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,877 | INFO     | [data] copytool_in thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,916 | INFO     | [job] control thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,918 | INFO     | [payload] validate_post thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:53,928 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:54,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 03:45:47] 2026-05-02 01:44:54,222 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:54,321 | INFO     | [payload] failed_post thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:54,429 | INFO     | [data] copytool_out thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:55,152 | INFO     | [job] queue monitor thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:44:56,580 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:45:02,358 | INFO     | job.realtimelogging is not enabled
[2026-05-02 03:45:47] 2026-05-02 01:45:03,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 03:45:47] 2026-05-02 01:45:21,540 | INFO     | PID=3161555 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-02 03:45:47] 2026-05-02 01:45:21,540 | INFO     | .. there are 24 such processes running
[2026-05-02 03:45:47] 2026-05-02 01:45:21,542 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 03:45:47] 2026-05-02 01:45:21,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 03:45:47] 2026-05-02 01:45:21,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 03:45:47] 2026-05-02 01:45:42,135 | INFO     | [monitor] cgroup control has ended
[2026-05-02 03:45:47] 2026-05-02 01:45:42,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22621677418304)>', '<ExcThread(monitor, started 22621374617344)>']
[2026-05-02 03:45:47] 2026-05-02 01:45:42,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 03:45:47] 2026-05-02 01:45:42,649 | INFO     | [monitor] control thread has ended
[2026-05-02 03:45:47] 2026-05-02 01:45:47,221 | INFO     | all workflow threads have been joined
[2026-05-02 03:45:47] 2026-05-02 01:45:47,221 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 03:45:47] 2026-05-02 01:45:47,222 | INFO     | traces error code: 0
[2026-05-02 03:45:47] 2026-05-02 01:45:47,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 03:45:47] 2026-05-02 01:45:47,375 [wrapper] ==== pilot stdout END ====
[2026-05-02 03:45:47] 2026-05-02 01:45:47,379 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 03:45:47] 2026-05-02 01:45:47,383 [wrapper] pilotpid: 3161555
[2026-05-02 03:45:47] 2026-05-02 01:45:47,387 [wrapper] Pilot exit status: 0
[2026-05-02 03:45:47] 2026-05-02 01:45:47,403 [wrapper] pandaids: 7118229705
[2026-05-02 03:45:47] 2026-05-02 01:45:47,624 [wrapper] cleanup supervisor_pilot 3853588 3161556
[2026-05-02 03:45:47] 2026-05-02 01:45:47,629 [wrapper] Test setup, not cleaning
[2026-05-02 03:45:47] 2026-05-02 01:45:47,633 [wrapper] apfmon messages muted
[2026-05-02 03:45:47] 2026-05-02 01:45:47,637 [wrapper] ==== wrapper stdout END ====
[2026-05-02 03:45:47] 2026-05-02 01:45:47,644 [wrapper] ==== wrapper stderr END ====
[2026-05-02 03:45:47]  *** Error codes and diagnostics ***
[2026-05-02 03:45:47]     "exeErrorCode": 0,
[2026-05-02 03:45:47]     "pilotErrorCode": 0,
[2026-05-02 03:45:47]  *** Listing of results directory ***
[2026-05-02 03:45:47] total 465636
[2026-05-02 03:45:47] -rwx------. 1 boinc boinc     36322 Apr 29 03:45 runpilot2-wrapper.sh
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc    683926 Apr 29 12:28 pilot3.tar.gz
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc      5631 Apr 29 13:03 queuedata.json
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc       100 May  1 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 03:45:47] -rwxr-xr-x. 1 boinc boinc      7986 May  1 22:28 run_atlas
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc       105 May  1 22:28 job.xml
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc 257626827 May  1 22:28 EVNT.49863749._000131.pool.root.1
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc      6612 May  1 22:28 init_data.xml
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc    697429 May  1 22:28 input.tar.gz
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc     15667 May  1 22:28 start_atlas.sh
[2026-05-02 03:45:47] drwxrwx--x. 2 boinc boinc      4096 May  1 22:28 shared
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc         0 May  1 22:28 boinc_lockfile
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc      2587 May  1 22:28 pandaJob.out
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc   1003006 May  1 22:28 agis_schedconf.cvmfs.json
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc       443 May  1 22:29 workernode_map.json
[2026-05-02 03:45:47] drwx------. 5 boinc boinc      4096 May  1 22:29 pilot3
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc 210960564 May  2 03:44 HITS.49863752._003168.pool.root.1
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc       489 May  2 03:44 boinc_task_state.xml
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc      1027 May  2 03:44 memory_monitor_summary.json
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc   1508687 May  2 03:44 agis_ddmendpoints.agis.ALL.json
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc    366521 May  2 03:44 log.49863752._003168.job.log.tgz.1
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc      6373 May  2 03:44 heartbeat_new.json
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc      6264 May  2 03:44 heartbeat.json
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc        95 May  2 03:45 pilot_heartbeat.json
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc      8192 May  2 03:45 boinc_mmap_file
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc        28 May  2 03:45 wrapper_checkpoint.txt
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc      4907 May  2 03:45 pilotlog.txt
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc   1674767 May  2 03:45 log.49863752._003168.job.log.1
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc       357 May  2 03:45 output.list
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc       410 May  2 03:45 runtime_log
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc   2058240 May  2 03:45 result.tar.gz
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc      8845 May  2 03:45 runtime_log.err
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc       666 May  2 03:45 62c5d0ffeac2.diag
[2026-05-02 03:45:47] -rw-r--r--. 1 boinc boinc     21104 May  2 03:45 stderr.txt
[2026-05-02 03:45:47] HITS file was successfully produced:
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc 210960564 May  2 03:44 shared/HITS.pool.root.1
[2026-05-02 03:45:47]  *** Contents of shared directory: ***
[2026-05-02 03:45:47] total 460332
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc 257626827 May  1 22:28 ATLAS.root_0
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc    697429 May  1 22:28 input.tar.gz
[2026-05-02 03:45:47] -rw-r--r--. 2 boinc boinc     15667 May  1 22:28 start_atlas.sh
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc 210960564 May  2 03:44 HITS.pool.root.1
[2026-05-02 03:45:47] -rw-------. 1 boinc boinc   2058240 May  2 03:45 result.tar.gz
03:45:49 (3153567): run_atlas exited; CPU time 72219.691279
03:45:49 (3153567): called boinc_finish(0)

</stderr_txt>
]]>

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