Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:27 (12847): wrapper (7.7.26015): starting
03:55:27 (12847): wrapper: running run_atlas (--nthreads 12)
[2026-04-29 03:55:27] Arguments: --nthreads 12
[2026-04-29 03:55:27] Threads: 12
[2026-04-29 03:55:27] Checking for CVMFS
[2026-04-29 03:55:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 03:55:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 03:55:27] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 03:55:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 03:55:27] 2.11.2.0 2979 509169 92236 158998 1 50 16970480 20275201 1 130560 2 209423440 99.956 27271886 17270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-29 03:55:27] CVMFS is ok
[2026-04-29 03:55:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 03:55:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 03:55:27] Further information can be found at the LHC@home message board.
[2026-04-29 03:55:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 03:55:27] Checking for apptainer binary...
[2026-04-29 03:55:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 03:55:27] Running /usr/bin/apptainer --version
[2026-04-29 03:55:27] apptainer version 1.3.2-1.el7
[2026-04-29 03:55:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 03:55:29] c-205-7.aglt2.org
[2026-04-29 03:55:29] apptainer works
[2026-04-29 03:55:29] Set ATHENA_PROC_NUMBER=12
[2026-04-29 03:55:29] Set ATHENA_CORE_NUMBER=12
[2026-04-29 03:55:29] Starting ATLAS job with PandaID=7116222787
[2026-04-29 03:55:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 05:46:08]  *** The last 200 lines of the pilot log: ***
[2026-04-29 05:46:08] 2026-04-29 09:45:16,034 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,034 | INFO     | mean y: 2749225.4536082475
[2026-04-29 05:46:08] 2026-04-29 09:45:16,034 | INFO     | intersect: 2749225.4536082475
[2026-04-29 05:46:08] 2026-04-29 09:45:16,034 | INFO     | chi2: 0.06653664728354522
[2026-04-29 05:46:08] 2026-04-29 09:45:16,034 | INFO     | current chi2=0.06653664728354522 (change=39.84695691885353 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,035 | INFO     | sum of square deviations: 241429643.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,035 | INFO     | sum of deviations: -3511181350.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,035 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,035 | INFO     | mean y: 2737185.4782608696
[2026-04-29 05:46:08] 2026-04-29 09:45:16,035 | INFO     | intersect: 2737185.4782608696
[2026-04-29 05:46:08] 2026-04-29 09:45:16,036 | INFO     | chi2: 0.048568018993840896
[2026-04-29 05:46:08] 2026-04-29 09:45:16,036 | INFO     | current chi2=0.048568018993840896 (change=27.0056112282472 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,036 | INFO     | sum of square deviations: 204163828.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,036 | INFO     | sum of deviations: 68541552.00000009
[2026-04-29 05:46:08] 2026-04-29 09:45:16,036 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,037 | INFO     | mean y: 2722519.528735632
[2026-04-29 05:46:08] 2026-04-29 09:45:16,037 | INFO     | intersect: 2722519.528735632
[2026-04-29 05:46:08] 2026-04-29 09:45:16,037 | INFO     | chi2: 0.010740501229898005
[2026-04-29 05:46:08] 2026-04-29 09:45:16,037 | INFO     | current chi2=0.010740501229898005 (change=77.88565098514715 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,037 | INFO     | sum of square deviations: 170944600.5
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | sum of deviations: 534185662.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | mean y: 2720544.3658536584
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | intersect: 2720544.3658536584
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | chi2: 0.0001030311919658312
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | current chi2=0.0001030311919658312 (change=99.04072268360228 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,038 | INFO     | sum of square deviations: 141539398.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | sum of deviations: 348935372.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | mean y: 2721497.5714285714
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | intersect: 2721497.5714285714
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | chi2: 4.6366445104700496e-05
[2026-04-29 05:46:08] 2026-04-29 09:45:16,039 | INFO     | current chi2=4.6366445104700496e-05 (change=54.99766214480246 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | sum of square deviations: 115715658.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | sum of deviations: 238559898.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | mean y: 2722147.9444444445
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | intersect: 2722147.9444444445
[2026-04-29 05:46:08] 2026-04-29 09:45:16,040 | INFO     | chi2: 3.207311830200186e-05
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | current chi2=3.207311830200186e-05 (change=30.82687657081052 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | sum of square deviations: 93240818.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | sum of deviations: 140739199.99999994
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | mean y: 2722812.9402985075
[2026-04-29 05:46:08] 2026-04-29 09:45:16,041 | INFO     | intersect: 2722812.9402985075
[2026-04-29 05:46:08] 2026-04-29 09:45:16,042 | INFO     | chi2: 1.2133611642229309e-05
[2026-04-29 05:46:08] 2026-04-29 09:45:16,042 | INFO     | current chi2=1.2133611642229309e-05 (change=62.168905661187345 %)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,042 | INFO     | left removable region not found
[2026-04-29 05:46:08] 2026-04-29 09:45:16,042 | INFO     | sum of square deviations: 319447850.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | sum of deviations: 11286991528.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | mean x (centered): 0.0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | mean y: 2692463.386138614
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | intersect: 2692463.386138614
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | chi2: 1.6151029183941077
[2026-04-29 05:46:08] 2026-04-29 09:45:16,043 | INFO     | current memory leak: 35.33 B/s (using 101 data points, chi2=1.62)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | could have reported an average CPU frequency of 1706 MHz (7 samples)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | ..............................
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . Timing measurements:
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . get job = 0 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . initial setup = 7 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . payload setup = 14 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . stage-in = 0 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . payload execution = 6532 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,044 | INFO     | . stage-out = 0 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,045 | INFO     | . log creation = 0 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,045 | INFO     | ..............................
[2026-04-29 05:46:08] 2026-04-29 09:45:16,122 | INFO     | 
[2026-04-29 05:46:08] 2026-04-29 09:45:16,122 | INFO     | job summary report
[2026-04-29 05:46:08] 2026-04-29 09:45:16,122 | INFO     | --------------------------------------------------
[2026-04-29 05:46:08] 2026-04-29 09:45:16,122 | INFO     | PanDA job id: 7116222787
[2026-04-29 05:46:08] 2026-04-29 09:45:16,122 | INFO     | task id: 49863714
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | errors: (none)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | pilot state: finished 
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | transexitcode: 0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | exeerrorcode: 0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,123 | INFO     | exeerrordiag: 
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | exitcode: 0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | exitmsg: OK
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | cpuconsumptiontime: 71245 s
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | nevents: 400
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | neventsw: 0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,124 | INFO     | pid: 20964
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | pgrp: 20964
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | corecount: 12
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | event service: False
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | sizes: {0: 2280661, 1: 2282490, 11: 2282490, 6550: 2309618, 6552: 2318616, 6554: 2318994}
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | --------------------------------------------------
[2026-04-29 05:46:08] 2026-04-29 09:45:16,125 | INFO     | 
[2026-04-29 05:46:08] 2026-04-29 09:45:16,126 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-29 05:46:08] 2026-04-29 09:45:16,148 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 05:46:08] 2026-04-29 09:45:16,152 | INFO     | job 7116222787 has completed (purged errors)
[2026-04-29 05:46:08] 2026-04-29 09:45:16,152 | INFO     | overall cleanup function is called
[2026-04-29 05:46:08] 2026-04-29 09:45:17,159 | INFO     | --- collectZombieJob: --- 10, [20964]
[2026-04-29 05:46:08] 2026-04-29 09:45:17,159 | INFO     | zombie collector waiting for pid 20964
[2026-04-29 05:46:08] 2026-04-29 09:45:17,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 05:46:08] 2026-04-29 09:45:17,159 | INFO     | collected zombie processes
[2026-04-29 05:46:08] 2026-04-29 09:45:17,159 | INFO     | will attempt to kill all subprocesses of pid=20964
[2026-04-29 05:46:08] 2026-04-29 09:45:17,236 | INFO     | process IDs to be killed: [20964] (in reverse order)
[2026-04-29 05:46:08] 2026-04-29 09:45:17,288 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 05:46:08] 2026-04-29 09:45:17,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 05:46:08] 2026-04-29 09:45:17,292 | INFO     | did not find any defunct processes belonging to 20964
[2026-04-29 05:46:08] 2026-04-29 09:45:17,295 | INFO     | did not find any defunct processes belonging to 20964
[2026-04-29 05:46:08] 2026-04-29 09:45:17,296 | INFO     | Ready for new job
[2026-04-29 05:46:08] 2026-04-29 09:45:17,297 | INFO     | ***************************************
[2026-04-29 05:46:08] 2026-04-29 09:45:17,297 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 05:46:08] 2026-04-29 09:45:17,297 | INFO     | ***************************************
[2026-04-29 05:46:08] 2026-04-29 09:45:17,297 | INFO     | 
[2026-04-29 05:46:08] 2026-04-29 09:45:17,298 | INFO     | architecture information:
[2026-04-29 05:46:08] 2026-04-29 09:45:17,299 | INFO     | executing command: cat /etc/os-release
[2026-04-29 05:46:08] 2026-04-29 09:45:17,314 | INFO     | cat /etc/os-release:
[2026-04-29 05:46:08] NAME="CentOS Linux"
[2026-04-29 05:46:08] VERSION="7 (Core)"
[2026-04-29 05:46:08] ID="centos"
[2026-04-29 05:46:08] ID_LIKE="rhel fedora"
[2026-04-29 05:46:08] VERSION_ID="7"
[2026-04-29 05:46:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 05:46:08] ANSI_COLOR="0;31"
[2026-04-29 05:46:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 05:46:08] HOME_URL="https://www.centos.org/"
[2026-04-29 05:46:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 05:46:08] 
[2026-04-29 05:46:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 05:46:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 05:46:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 05:46:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 05:46:08] 
[2026-04-29 05:46:08] 2026-04-29 09:45:17,314 | INFO     | ***************************************
[2026-04-29 05:46:08] 2026-04-29 09:45:17,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-29 05:46:08] 2026-04-29 09:45:17,835 | INFO     | sufficient remaining disk space (29216473088 B)
[2026-04-29 05:46:08] 2026-04-29 09:45:17,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 05:46:08] 2026-04-29 09:45:17,835 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 05:46:08] 2026-04-29 09:45:17,835 | INFO     | update_server=False
[2026-04-29 05:46:08] 2026-04-29 09:45:17,835 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 05:46:08] 2026-04-29 09:45:17,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 05:46:08] 2026-04-29 09:45:17,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 05:46:08] 2026-04-29 09:45:17,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 05:46:08] 2026-04-29 09:45:17,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 05:46:08] 2026-04-29 09:45:17,837 | INFO     | aborting loop
[2026-04-29 05:46:08] 2026-04-29 09:45:18,051 | INFO     | all job control threads have been joined
[2026-04-29 05:46:08] 2026-04-29 09:45:18,638 | INFO     | all data control threads have been joined
[2026-04-29 05:46:08] 2026-04-29 09:45:18,815 | INFO     | all payload control threads have been joined
[2026-04-29 05:46:08] 2026-04-29 09:45:18,815 | INFO     | job.realtimelogging is not enabled
[2026-04-29 05:46:08] 2026-04-29 09:45:18,841 | INFO     | [job] retrieve thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:18,842 | INFO     | [job] queue monitor thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:18,843 | INFO     | [job] job monitor thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:18,993 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,048 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,052 | INFO     | [job] control thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,355 | INFO     | [data] copytool_in thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,468 | INFO     | [payload] validate_post thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,643 | INFO     | [data] control thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,814 | INFO     | [job] validate thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,817 | INFO     | [payload] control thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,842 | INFO     | [data] copytool_out thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:19,984 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:20,281 | INFO     | [payload] failed_post thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:21,840 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 05:46:08] 2026-04-29 09:45:48,038 | INFO     | PID=16530 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-29 05:46:08] 2026-04-29 09:45:48,038 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 05:46:08] 2026-04-29 09:45:48,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 05:46:08] 2026-04-29 09:45:48,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 05:46:08] 2026-04-29 09:46:00,995 | INFO     | [monitor] cgroup control has ended
[2026-04-29 05:46:08] 2026-04-29 09:46:02,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527918372672)>', '<ExcThread(monitor, started 140526959453952)>']
[2026-04-29 05:46:08] 2026-04-29 09:46:03,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 05:46:08] 2026-04-29 09:46:03,113 | INFO     | [monitor] control thread has ended
[2026-04-29 05:46:08] 2026-04-29 09:46:07,967 | INFO     | all workflow threads have been joined
[2026-04-29 05:46:08] 2026-04-29 09:46:07,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 05:46:08] 2026-04-29 09:46:07,980 | INFO     | traces error code: 0
[2026-04-29 05:46:08] 2026-04-29 09:46:07,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 05:46:08] 2026-04-29 09:46:08,074 [wrapper] ==== pilot stdout END ====
[2026-04-29 05:46:08] 2026-04-29 09:46:08,078 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 05:46:08] 2026-04-29 09:46:08,082 [wrapper] pilotpid: 16530
[2026-04-29 05:46:08] 2026-04-29 09:46:08,085 [wrapper] Pilot exit status: 0
[2026-04-29 05:46:08] 2026-04-29 09:46:08,101 [wrapper] pandaids: 7116222787
[2026-04-29 05:46:08] 2026-04-29 09:46:08,145 [wrapper] cleanup supervisor_pilot 17994 16531
[2026-04-29 05:46:08] 2026-04-29 09:46:08,149 [wrapper] Test setup, not cleaning
[2026-04-29 05:46:08] 2026-04-29 09:46:08,153 [wrapper] apfmon messages muted
[2026-04-29 05:46:08] 2026-04-29 09:46:08,157 [wrapper] ==== wrapper stdout END ====
[2026-04-29 05:46:08] 2026-04-29 09:46:08,161 [wrapper] ==== wrapper stderr END ====
[2026-04-29 05:46:08]  *** Error codes and diagnostics ***
[2026-04-29 05:46:08]     "exeErrorCode": 0,
[2026-04-29 05:46:08]     "pilotErrorCode": 0,
[2026-04-29 05:46:08]  *** Listing of results directory ***
[2026-04-29 05:46:08] total 473944
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas      5631 Apr 27 00:24 queuedata.json
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas    683926 Apr 27 00:24 pilot3.tar.gz
[2026-04-29 05:46:08] -rwx------ 1 boincer umatlas     36322 Apr 27 00:25 runpilot2-wrapper.sh
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas       100 Apr 29 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 05:46:08] -rwxr-xr-x 1 boincer umatlas      7986 Apr 29 03:55 run_atlas
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas       105 Apr 29 03:55 job.xml
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas 262205273 Apr 29 03:55 EVNT.49863712._000114.pool.root.1
[2026-04-29 05:46:08] drwxrwx--x 2 boincer umatlas      4096 Apr 29 03:55 shared
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas    697413 Apr 29 03:55 input.tar.gz
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas     15667 Apr 29 03:55 start_atlas.sh
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas         0 Apr 29 03:55 boinc_lockfile
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas      2574 Apr 29 03:55 pandaJob.out
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas        57 Apr 29 03:55 setup.sh.local
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas   1001050 Apr 29 03:55 agis_schedconf.cvmfs.json
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas   1512704 Apr 29 03:55 agis_ddmendpoints.agis.ALL.json
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas       444 Apr 29 03:55 workernode_map.json
[2026-04-29 05:46:08] drwx------ 5 boincer umatlas      4096 Apr 29 03:55 pilot3
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas 216942189 Apr 29 05:44 HITS.49863714._002820.pool.root.1
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas       488 Apr 29 05:44 boinc_task_state.xml
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas      1046 Apr 29 05:45 memory_monitor_summary.json
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas    390341 Apr 29 05:45 log.49863714._002820.job.log.tgz.1
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas        95 Apr 29 05:45 pilot_heartbeat.json
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas      6430 Apr 29 05:45 heartbeat_new.json
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas      6321 Apr 29 05:45 heartbeat.json
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas      5868 Apr 29 05:45 init_data.xml
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas      8192 Apr 29 05:45 boinc_mmap_file
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas        27 Apr 29 05:45 wrapper_checkpoint.txt
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas      4817 Apr 29 05:46 pilotlog.txt
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas    621720 Apr 29 05:46 log.49863714._002820.job.log.1
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas       357 Apr 29 05:46 output.list
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas       410 Apr 29 05:46 runtime_log
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas   1034240 Apr 29 05:46 result.tar.gz
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas       659 Apr 29 05:46 e5429c828719.diag
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas      8961 Apr 29 05:46 runtime_log.err
[2026-04-29 05:46:08] -rw-r--r-- 1 boincer umatlas     20773 Apr 29 05:46 stderr.txt
[2026-04-29 05:46:08] HITS file was successfully produced:
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas 216942189 Apr 29 05:44 shared/HITS.pool.root.1
[2026-04-29 05:46:08]  *** Contents of shared directory: ***
[2026-04-29 05:46:08] total 469636
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas 262205273 Apr 29 03:55 ATLAS.root_0
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas    697413 Apr 29 03:55 input.tar.gz
[2026-04-29 05:46:08] -rw-r--r-- 2 boincer umatlas     15667 Apr 29 03:55 start_atlas.sh
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas 216942189 Apr 29 05:44 HITS.pool.root.1
[2026-04-29 05:46:08] -rw------- 1 boincer umatlas   1034240 Apr 29 05:46 result.tar.gz
05:46:09 (12847): run_atlas exited; CPU time 71223.654399
05:46:09 (12847): called boinc_finish(0)

</stderr_txt>
]]>

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