Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:07 (20256): wrapper (7.7.26015): starting
23:59:07 (20256): wrapper: running run_atlas (--nthreads 12)
[2026-04-29 23:59:07] Arguments: --nthreads 12
[2026-04-29 23:59:07] Threads: 12
[2026-04-29 23:59:07] Checking for CVMFS
[2026-04-29 23:59:07] No cvmfs_config command found, will try listing directly
[2026-04-29 23:59:07] CVMFS is ok
[2026-04-29 23:59:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 23:59:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 23:59:07] Further information can be found at the LHC@home message board.
[2026-04-29 23:59:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 23:59:07] Checking for apptainer binary...
[2026-04-29 23:59:07] which: no apptainer in ((null))
[2026-04-29 23:59:07] apptainer is not installed, using version from CVMFS
[2026-04-29 23:59:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 23:59:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/22/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-04-29 23:59:07] apptainer works
[2026-04-29 23:59:07] Set ATHENA_PROC_NUMBER=12
[2026-04-29 23:59:07] Set ATHENA_CORE_NUMBER=12
[2026-04-29 23:59:07] Starting ATLAS job with PandaID=7117950376
[2026-04-29 23:59:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 00:40:46]  *** The last 200 lines of the pilot log: ***
[2026-04-30 00:40:46]  filesize=353953
[2026-04-30 00:40:46]  filetype=log
[2026-04-30 00:40:46]  guid=2f222e9b-8d92-4a3d-b886-d61756d42e80
[2026-04-30 00:40:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-30 00:40:46]  is_altstaged=None
[2026-04-30 00:40:46]  is_tar=False
[2026-04-30 00:40:46]  lfn=log.49863840._001352.job.log.tgz.1
[2026-04-30 00:40:46]  mtime=0
[2026-04-30 00:40:46]  protocol_id=None
[2026-04-30 00:40:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-30 00:40:46]  replicas=None
[2026-04-30 00:40:46]  scope=mc23_13p6TeV
[2026-04-30 00:40:46]  status=None
[2026-04-30 00:40:46]  status_code=0
[2026-04-30 00:40:46]  storage_token=
[2026-04-30 00:40:46]  surl=/var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7117950376/log.49863840._001352.job.log.tgz.1
[2026-04-30 00:40:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/f8/log.49863840._001352.job.log.tgz.1
[2026-04-30 00:40:46]  workdir=None
[2026-04-30 00:40:46] ]
[2026-04-30 00:40:46] 2026-04-29 22:40:11,155 | INFO     | transferring file log.49863840._001352.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7117950376/log.49863840._001352.job.log.tgz.1 to /var/lib/
[2026-04-30 00:40:46] 2026-04-29 22:40:11,156 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7117950376/log.49863840._001352.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/22/
[2026-04-30 00:40:46] 2026-04-29 22:40:11,174 | INFO     | adding to output.list: log.49863840._001352.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/f8/log.49863840._001352.job.log.tg
[2026-04-30 00:40:46] 2026-04-29 22:40:11,174 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-30 00:40:46] 2026-04-29 22:40:11,174 | INFO     | summary of transferred files:
[2026-04-30 00:40:46] 2026-04-29 22:40:11,175 | INFO     |  -- lfn=log.49863840._001352.job.log.tgz.1, status_code=0, status=transferred
[2026-04-30 00:40:46] 2026-04-29 22:40:11,175 | INFO     | stage-out finished correctly
[2026-04-30 00:40:46] 2026-04-29 22:40:11,230 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-30 00:40:46] 2026-04-29 22:40:11,575 | INFO     | PID=25022 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-30 00:40:46] 2026-04-29 22:40:11,576 | INFO     | .. there are 17 such processes running
[2026-04-30 00:40:46] 2026-04-29 22:40:12,742 | INFO     | job 7117950376 has state=finished
[2026-04-30 00:40:46] 2026-04-29 22:40:12,742 | INFO     | preparing for final server update for job 7117950376 in state='finished'
[2026-04-30 00:40:46] 2026-04-29 22:40:12,742 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7117950376/jobReport.json
[2026-04-30 00:40:46] 2026-04-29 22:40:12,744 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/22/workernode_map.json
[2026-04-30 00:40:46] 2026-04-29 22:40:12,744 | INFO     | this job has now completed (state=finished)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,744 | INFO     | log transfer has been attempted: DONE
[2026-04-30 00:40:46] 2026-04-29 22:40:12,744 | INFO     | job 7117950376 has finished - writing final server update
[2026-04-30 00:40:46] 2026-04-29 22:40:12,745 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_380049/.job.ad'
[2026-04-30 00:40:46] 2026-04-29 22:40:12,745 | INFO     | total number of processed events: 400 (read)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,763 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7117950376/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,763 | INFO     | extracted standard info from prmon json
[2026-04-30 00:40:46] 2026-04-29 22:40:12,763 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 00:40:46] 2026-04-29 22:40:12,763 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 00:40:46] 2026-04-29 22:40:12,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | fitting pss+swap vs Time
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | sum of square deviations: 11133232.0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | sum of deviations: 233885834.0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | mean x (centered): 0.0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | mean y: 2714269.090909091
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | intersect: 2714269.090909091
[2026-04-30 00:40:46] 2026-04-29 22:40:12,764 | INFO     | chi2: 0.000369370552242731
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | current memory leak: 21.01 B/s (using 33 data points, chi2=0.00)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | could have reported an average CPU frequency of 3580 MHz (5 samples)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | ..............................
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . Timing measurements:
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . get job = 0 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . initial setup = 4 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . payload setup = 6 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . stage-in = 0 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . payload execution = 2431 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . stage-out = 0 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | . log creation = 0 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,765 | INFO     | ..............................
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | 
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | job summary report
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | --------------------------------------------------
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | PanDA job id: 7117950376
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | task id: 49863840
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | errors: (none)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | pilot state: finished 
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | transexitcode: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | exeerrorcode: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | exeerrordiag: 
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | exitcode: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | exitmsg: OK
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | cpuconsumptiontime: 25301 s
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | nevents: 400
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | neventsw: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | pid: 31007
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | pgrp: 31007
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | corecount: 12
[2026-04-30 00:40:46] 2026-04-29 22:40:12,858 | INFO     | event service: False
[2026-04-30 00:40:46] 2026-04-29 22:40:12,859 | INFO     | sizes: {0: 2282540, 10: 2282540, 2441: 2307746, 2442: 2316824, 2444: 2316994}
[2026-04-30 00:40:46] 2026-04-29 22:40:12,859 | INFO     | --------------------------------------------------
[2026-04-30 00:40:46] 2026-04-29 22:40:12,859 | INFO     | 
[2026-04-30 00:40:46] 2026-04-29 22:40:12,859 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/22
[2026-04-30 00:40:46] 2026-04-29 22:40:12,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | job 7117950376 has completed (purged errors)
[2026-04-30 00:40:46] 2026-04-29 22:40:12,882 | INFO     | overall cleanup function is called
[2026-04-30 00:40:46] 2026-04-29 22:40:13,890 | INFO     | --- collectZombieJob: --- 10, [31007]
[2026-04-30 00:40:46] 2026-04-29 22:40:13,890 | INFO     | zombie collector waiting for pid 31007
[2026-04-30 00:40:46] 2026-04-29 22:40:13,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 00:40:46] 2026-04-29 22:40:13,890 | INFO     | collected zombie processes
[2026-04-30 00:40:46] 2026-04-29 22:40:13,890 | INFO     | will attempt to kill all subprocesses of pid=31007
[2026-04-30 00:40:46] 2026-04-29 22:40:14,159 | INFO     | process IDs to be killed: [31007] (in reverse order)
[2026-04-30 00:40:46] 2026-04-29 22:40:14,285 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 00:40:46] 2026-04-29 22:40:14,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 00:40:46] 2026-04-29 22:40:14,303 | INFO     | did not find any defunct processes belonging to 31007
[2026-04-30 00:40:46] 2026-04-29 22:40:14,319 | INFO     | did not find any defunct processes belonging to 31007
[2026-04-30 00:40:46] 2026-04-29 22:40:14,319 | INFO     | Ready for new job
[2026-04-30 00:40:46] 2026-04-29 22:40:14,320 | INFO     | ***************************************
[2026-04-30 00:40:46] 2026-04-29 22:40:14,320 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 00:40:46] 2026-04-29 22:40:14,320 | INFO     | ***************************************
[2026-04-30 00:40:46] 2026-04-29 22:40:14,320 | INFO     | 
[2026-04-30 00:40:46] 2026-04-29 22:40:14,325 | INFO     | architecture information:
[2026-04-30 00:40:46] 2026-04-29 22:40:14,325 | INFO     | executing command: cat /etc/os-release
[2026-04-30 00:40:46] 2026-04-29 22:40:14,338 | INFO     | cat /etc/os-release:
[2026-04-30 00:40:46] NAME="CentOS Linux"
[2026-04-30 00:40:46] VERSION="7 (Core)"
[2026-04-30 00:40:46] ID="centos"
[2026-04-30 00:40:46] ID_LIKE="rhel fedora"
[2026-04-30 00:40:46] VERSION_ID="7"
[2026-04-30 00:40:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 00:40:46] ANSI_COLOR="0;31"
[2026-04-30 00:40:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 00:40:46] HOME_URL="https://www.centos.org/"
[2026-04-30 00:40:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 00:40:46] 
[2026-04-30 00:40:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 00:40:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 00:40:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 00:40:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 00:40:46] 
[2026-04-30 00:40:46] 2026-04-29 22:40:14,338 | INFO     | ***************************************
[2026-04-30 00:40:46] 2026-04-29 22:40:14,841 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/22
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | INFO     | sufficient remaining disk space (73749495808 B)
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | INFO     | update_server=False
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 00:40:46] 2026-04-29 22:40:14,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 00:40:46] 2026-04-29 22:40:14,924 | INFO     | all payload control threads have been joined
[2026-04-30 00:40:46] 2026-04-29 22:40:15,142 | INFO     | all job control threads have been joined
[2026-04-30 00:40:46] 2026-04-29 22:40:15,225 | INFO     | all data control threads have been joined
[2026-04-30 00:40:46] 2026-04-29 22:40:15,327 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 00:40:46] 2026-04-29 22:40:15,327 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 00:40:46] 2026-04-29 22:40:15,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 00:40:46] 2026-04-29 22:40:15,327 | INFO     | will abort loop
[2026-04-30 00:40:46] 2026-04-29 22:40:15,860 | INFO     | [job] retrieve thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:15,927 | INFO     | [data] copytool_in thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:15,927 | INFO     | [payload] control thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,109 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,148 | INFO     | [job] control thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,230 | INFO     | [data] control thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,332 | INFO     | [job] job monitor thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,450 | INFO     | [payload] validate_post thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,606 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,861 | INFO     | [data] copytool_out thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:16,978 | INFO     | [job] validate thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:17,144 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:17,277 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:17,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 00:40:46] 2026-04-29 22:40:17,438 | INFO     | [payload] failed_post thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:17,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 00:40:46] 2026-04-29 22:40:18,829 | INFO     | [job] queue monitor thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:21,297 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 00:40:46] 2026-04-29 22:40:21,849 | INFO     | [monitor] cgroup control has ended
[2026-04-30 00:40:46] 2026-04-29 22:40:22,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22554525366080)>', '<ExcThread(monitor, started 22554285971200)>']
[2026-04-30 00:40:46] 2026-04-29 22:40:27,578 | INFO     | all workflow threads have been joined
[2026-04-30 00:40:46] 2026-04-29 22:40:27,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 00:40:46] 2026-04-29 22:40:27,578 | INFO     | traces error code: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:27,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 00:40:46] 2026-04-29 22:40:44,644 | INFO     | 2460s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | INFO     | PID=25022 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | INFO     | .. there are 17 such processes running
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 00:40:46] 2026-04-29 22:40:46,052 | INFO     | [monitor] control thread has ended
[2026-04-30 00:40:46] 2026-04-29 22:40:46,227 [wrapper] ==== pilot stdout END ====
[2026-04-30 00:40:46] 2026-04-29 22:40:46,229 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 00:40:46] 2026-04-29 22:40:46,231 [wrapper] pilotpid: 25022
[2026-04-30 00:40:46] 2026-04-29 22:40:46,233 [wrapper] Pilot exit status: 0
[2026-04-30 00:40:46] 2026-04-29 22:40:46,241 [wrapper] pandaids: 7117950376
[2026-04-30 00:40:46] 2026-04-29 22:40:46,328 [wrapper] cleanup supervisor_pilot  322636 25023
[2026-04-30 00:40:46] 2026-04-29 22:40:46,331 [wrapper] Test setup, not cleaning
[2026-04-30 00:40:46] 2026-04-29 22:40:46,334 [wrapper] apfmon messages muted
[2026-04-30 00:40:46] 2026-04-29 22:40:46,336 [wrapper] ==== wrapper stdout END ====
[2026-04-30 00:40:46] 2026-04-29 22:40:46,338 [wrapper] ==== wrapper stderr END ====
[2026-04-30 00:40:46]  *** Error codes and diagnostics ***
[2026-04-30 00:40:46]     "exeErrorCode": 0,
[2026-04-30 00:40:46]     "pilotErrorCode": 0,
[2026-04-30 00:40:46]  *** Listing of results directory ***
[2026-04-30 00:40:46] total 468404
[2026-04-30 00:40:46] -rwx------. 1 boinc boinc     36322 Apr 29 00:10 runpilot2-wrapper.sh
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc    683926 Apr 29 06:23 pilot3.tar.gz
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc      5631 Apr 29 07:00 queuedata.json
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc       100 Apr 29 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 00:40:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 23:59 run_atlas
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc       105 Apr 29 23:59 job.xml
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc 262240079 Apr 29 23:59 EVNT.49863838._000054.pool.root.1
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc     15667 Apr 29 23:59 start_atlas.sh
[2026-04-30 00:40:46] drwxrwx--x. 2 boinc boinc      4096 Apr 29 23:59 shared
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc    697428 Apr 29 23:59 input.tar.gz
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc      6627 Apr 29 23:59 init_data.xml
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc         0 Apr 29 23:59 boinc_lockfile
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc      2590 Apr 29 23:59 pandaJob.out
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc   1001893 Apr 29 23:59 agis_schedconf.cvmfs.json
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc   1512704 Apr 29 23:59 agis_ddmendpoints.agis.ALL.json
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc       443 Apr 29 23:59 workernode_map.json
[2026-04-30 00:40:46] drwx------. 5 boinc boinc      4096 Apr 29 23:59 pilot3
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc 212006380 Apr 30 00:39 HITS.49863840._001352.pool.root.1
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc       487 Apr 30 00:39 boinc_task_state.xml
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc        95 Apr 30 00:40 pilot_heartbeat.json
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc      1028 Apr 30 00:40 memory_monitor_summary.json
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc    353953 Apr 30 00:40 log.49863840._001352.job.log.tgz.1
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc      6370 Apr 30 00:40 heartbeat_new.json
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc      6261 Apr 30 00:40 heartbeat.json
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc        27 Apr 30 00:40 wrapper_checkpoint.txt
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc      8192 Apr 30 00:40 boinc_mmap_file
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc       936 Apr 30 00:40 pilotlog.txt
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc    276189 Apr 30 00:40 log.49863840._001352.job.log.1
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc       357 Apr 30 00:40 output.list
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc       410 Apr 30 00:40 runtime_log
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc    645120 Apr 30 00:40 result.tar.gz
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc      8846 Apr 30 00:40 runtime_log.err
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc       661 Apr 30 00:40 3062ddba2d92.diag
[2026-04-30 00:40:46] -rw-r--r--. 1 boinc boinc     21058 Apr 30 00:40 stderr.txt
[2026-04-30 00:40:46] HITS file was successfully produced:
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc 212006380 Apr 30 00:39 shared/HITS.pool.root.1
[2026-04-30 00:40:46]  *** Contents of shared directory: ***
[2026-04-30 00:40:46] total 464476
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc 262240079 Apr 29 23:59 ATLAS.root_0
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc     15667 Apr 29 23:59 start_atlas.sh
[2026-04-30 00:40:46] -rw-r--r--. 2 boinc boinc    697428 Apr 29 23:59 input.tar.gz
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc 212006380 Apr 30 00:39 HITS.pool.root.1
[2026-04-30 00:40:46] -rw-------. 1 boinc boinc    645120 Apr 30 00:40 result.tar.gz
00:40:47 (20256): run_atlas exited; CPU time 25363.589599
00:40:47 (20256): called boinc_finish(0)

</stderr_txt>
]]>

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