Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:44:29 (22151): wrapper (7.7.26015): starting
13:44:29 (22151): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 13:44:29] Arguments: --nthreads 8
[2026-04-29 13:44:29] Threads: 8
[2026-04-29 13:44:29] Checking for CVMFS
[2026-04-29 13:44:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 13:44:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 13:44:31] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 13:44:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 13:44:32] 2.11.2.0 24555 19840 107168 159005 1 54 22756425 25165824 1060 130560 0 40343402 99.949 11419975 7297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 13:44:32] CVMFS is ok
[2026-04-29 13:44:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 13:44:32] Checking for apptainer binary...
[2026-04-29 13:44:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 13:44:32] Running /usr/bin/apptainer --version
[2026-04-29 13:44:32] apptainer version 1.3.2-1.el7
[2026-04-29 13:44:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 13:44:52] cg-vwn357.simple-grid.lan
[2026-04-29 13:44:52] apptainer works
[2026-04-29 13:44:52] Set ATHENA_PROC_NUMBER=8
[2026-04-29 13:44:52] Set ATHENA_CORE_NUMBER=8
[2026-04-29 13:44:52] Starting ATLAS job with PandaID=7118230762
[2026-04-29 13:44:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 19:44:04]  *** The last 200 lines of the pilot log: ***
[2026-04-29 19:44:04] 2026-04-29 17:43:00,278 | INFO     | this job has now completed (state=finished)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,278 | INFO     | log transfer has been attempted: DONE
[2026-04-29 19:44:04] 2026-04-29 17:43:00,279 | INFO     | job 7118230762 has finished - writing final server update
[2026-04-29 19:44:04] 2026-04-29 17:43:00,279 | INFO     | total number of processed events: 400 (read)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,281 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7118230762/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,282 | INFO     | extracted standard info from prmon json
[2026-04-29 19:44:04] 2026-04-29 17:43:00,282 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 19:44:04] 2026-04-29 17:43:00,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 19:44:04] 2026-04-29 17:43:00,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 19:44:04] 2026-04-29 17:43:00,290 | INFO     | fitting pss+swap vs Time
[2026-04-29 19:44:04] 2026-04-29 17:43:00,290 | INFO     | sum of square deviations: 12187409905.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,294 | INFO     | sum of deviations: 228642555850.49997
[2026-04-29 19:44:04] 2026-04-29 17:43:00,298 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,299 | INFO     | mean y: 2457054.185294118
[2026-04-29 19:44:04] 2026-04-29 17:43:00,299 | INFO     | intersect: 2457054.185294118
[2026-04-29 19:44:04] 2026-04-29 17:43:00,299 | INFO     | chi2: 8.390982862111196
[2026-04-29 19:44:04] 2026-04-29 17:43:00,300 | INFO     | sum of square deviations: 11657595320.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,304 | INFO     | sum of deviations: 247746023420.00003
[2026-04-29 19:44:04] 2026-04-29 17:43:00,304 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,304 | INFO     | mean y: 2462474.286567164
[2026-04-29 19:44:04] 2026-04-29 17:43:00,304 | INFO     | intersect: 2462474.286567164
[2026-04-29 19:44:04] 2026-04-29 17:43:00,305 | INFO     | chi2: 7.661995999711678
[2026-04-29 19:44:04] 2026-04-29 17:43:00,305 | INFO     | current chi2=7.661995999711678 (change=8.687741047490386 %)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,305 | INFO     | right removable region: 334
[2026-04-29 19:44:04] 2026-04-29 17:43:00,306 | INFO     | sum of square deviations: 11657595320.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,309 | INFO     | sum of deviations: 108370763107.00003
[2026-04-29 19:44:04] 2026-04-29 17:43:00,309 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,310 | INFO     | mean y: 2491658.0537313432
[2026-04-29 19:44:04] 2026-04-29 17:43:00,310 | INFO     | intersect: 2491658.0537313432
[2026-04-29 19:44:04] 2026-04-29 17:43:00,310 | INFO     | chi2: 3.4951784666916876
[2026-04-29 19:44:04] 2026-04-29 17:43:00,311 | INFO     | current chi2=3.4951784666916876 (change=58.34601828977768 %)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,311 | INFO     | sum of square deviations: 11143362422.5
[2026-04-29 19:44:04] 2026-04-29 17:43:00,315 | INFO     | sum of deviations: 17735934586.000004
[2026-04-29 19:44:04] 2026-04-29 17:43:00,315 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,315 | INFO     | mean y: 2518510.206060606
[2026-04-29 19:44:04] 2026-04-29 17:43:00,315 | INFO     | intersect: 2518510.206060606
[2026-04-29 19:44:04] 2026-04-29 17:43:00,316 | INFO     | chi2: 0.8814964559932144
[2026-04-29 19:44:04] 2026-04-29 17:43:00,316 | INFO     | current chi2=0.8814964559932144 (change=74.7796438896128 %)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,316 | INFO     | sum of square deviations: 10644478650.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,325 | INFO     | sum of deviations: 3438579089.000004
[2026-04-29 19:44:04] 2026-04-29 17:43:00,325 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,325 | INFO     | mean y: 2522858.772307692
[2026-04-29 19:44:04] 2026-04-29 17:43:00,326 | INFO     | intersect: 2522858.772307692
[2026-04-29 19:44:04] 2026-04-29 17:43:00,326 | INFO     | chi2: 0.8022782117156635
[2026-04-29 19:44:04] 2026-04-29 17:43:00,326 | INFO     | current chi2=0.8022782117156635 (change=8.986791011915388 %)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,327 | INFO     | left removable region: 15
[2026-04-29 19:44:04] 2026-04-29 17:43:00,327 | INFO     | sum of square deviations: 10065751520.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,331 | INFO     | sum of deviations: 24835973893.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,331 | INFO     | mean x (centered): 0.0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,331 | INFO     | mean y: 2529517.1943573668
[2026-04-29 19:44:04] 2026-04-29 17:43:00,331 | INFO     | intersect: 2529517.1943573668
[2026-04-29 19:44:04] 2026-04-29 17:43:00,332 | INFO     | chi2: 0.012639485573301797
[2026-04-29 19:44:04] 2026-04-29 17:43:00,332 | INFO     | current memory leak: 2.47 B/s (using 319 data points, chi2=0.01)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | ..............................
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | . Timing measurements:
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | . get job = 0 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | . initial setup = 126 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | . payload setup = 238 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,333 | INFO     | . stage-in = 0 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,334 | INFO     | . payload execution = 20839 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,334 | INFO     | . stage-out = 3 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,334 | INFO     | . log creation = 1 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,334 | INFO     | ..............................
[2026-04-29 19:44:04] 2026-04-29 17:43:00,553 | INFO     | 
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | job summary report
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | --------------------------------------------------
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | PanDA job id: 7118230762
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | task id: 49863752
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | errors: (none)
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | pilot state: finished 
[2026-04-29 19:44:04] 2026-04-29 17:43:00,554 | INFO     | transexitcode: 0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | exeerrorcode: 0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | exeerrordiag: 
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | exitcode: 0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | exitmsg: OK
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | cpuconsumptiontime: 79547 s
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | nevents: 400
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | neventsw: 0
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | pid: 30612
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | pgrp: 30612
[2026-04-29 19:44:04] 2026-04-29 17:43:00,555 | INFO     | corecount: 8
[2026-04-29 19:44:04] 2026-04-29 17:43:00,556 | INFO     | event service: False
[2026-04-29 19:44:04] 2026-04-29 17:43:00,556 | INFO     | sizes: {0: 2280666, 1: 2281123, 2: 2282551, 12: 2282579, 21081: 2316212, 21082: 2316211, 21087: 2325395, 21090: 2325645}
[2026-04-29 19:44:04] 2026-04-29 17:43:00,556 | INFO     | --------------------------------------------------
[2026-04-29 19:44:04] 2026-04-29 17:43:00,556 | INFO     | 
[2026-04-29 19:44:04] 2026-04-29 17:43:00,556 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-04-29 19:44:04] 2026-04-29 17:43:01,122 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 19:44:04] 2026-04-29 17:43:01,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 19:44:04] 2026-04-29 17:43:01,125 | INFO     | job 7118230762 has completed (purged errors)
[2026-04-29 19:44:04] 2026-04-29 17:43:01,125 | INFO     | overall cleanup function is called
[2026-04-29 19:44:04] 2026-04-29 17:43:02,135 | INFO     | --- collectZombieJob: --- 10, [30612]
[2026-04-29 19:44:04] 2026-04-29 17:43:02,136 | INFO     | zombie collector waiting for pid 30612
[2026-04-29 19:44:04] 2026-04-29 17:43:02,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 19:44:04] 2026-04-29 17:43:02,136 | INFO     | collected zombie processes
[2026-04-29 19:44:04] 2026-04-29 17:43:02,136 | INFO     | will attempt to kill all subprocesses of pid=30612
[2026-04-29 19:44:04] 2026-04-29 17:43:02,211 | INFO     | process IDs to be killed: [30612] (in reverse order)
[2026-04-29 19:44:04] 2026-04-29 17:43:03,044 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 19:44:04] 2026-04-29 17:43:03,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 19:44:04] 2026-04-29 17:43:03,046 | INFO     | did not find any defunct processes belonging to 30612
[2026-04-29 19:44:04] 2026-04-29 17:43:03,048 | INFO     | did not find any defunct processes belonging to 30612
[2026-04-29 19:44:04] 2026-04-29 17:43:03,048 | INFO     | Ready for new job
[2026-04-29 19:44:04] 2026-04-29 17:43:03,050 | INFO     | ***************************************
[2026-04-29 19:44:04] 2026-04-29 17:43:03,051 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 19:44:04] 2026-04-29 17:43:03,051 | INFO     | ***************************************
[2026-04-29 19:44:04] 2026-04-29 17:43:03,051 | INFO     | 
[2026-04-29 19:44:04] 2026-04-29 17:43:03,051 | INFO     | pilot is running in a VM
[2026-04-29 19:44:04] 2026-04-29 17:43:03,052 | INFO     | architecture information:
[2026-04-29 19:44:04] 2026-04-29 17:43:03,052 | INFO     | executing command: cat /etc/os-release
[2026-04-29 19:44:04] 2026-04-29 17:43:03,356 | INFO     | cat /etc/os-release:
[2026-04-29 19:44:04] NAME="CentOS Linux"
[2026-04-29 19:44:04] VERSION="7 (Core)"
[2026-04-29 19:44:04] ID="centos"
[2026-04-29 19:44:04] ID_LIKE="rhel fedora"
[2026-04-29 19:44:04] VERSION_ID="7"
[2026-04-29 19:44:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 19:44:04] ANSI_COLOR="0;31"
[2026-04-29 19:44:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 19:44:04] HOME_URL="https://www.centos.org/"
[2026-04-29 19:44:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 19:44:04] 
[2026-04-29 19:44:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 19:44:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 19:44:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 19:44:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 19:44:04] 
[2026-04-29 19:44:04] 2026-04-29 17:43:03,356 | INFO     | ***************************************
[2026-04-29 19:44:04] 2026-04-29 17:43:03,860 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-04-29 19:44:04] 2026-04-29 17:43:04,095 | INFO     | sufficient remaining disk space (496026779648 B)
[2026-04-29 19:44:04] 2026-04-29 17:43:04,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 19:44:04] 2026-04-29 17:43:04,096 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 19:44:04] 2026-04-29 17:43:04,096 | INFO     | update_server=False
[2026-04-29 19:44:04] 2026-04-29 17:43:04,096 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 19:44:04] 2026-04-29 17:43:04,317 | INFO     | all data control threads have been joined
[2026-04-29 19:44:04] 2026-04-29 17:43:04,324 | INFO     | all payload control threads have been joined
[2026-04-29 19:44:04] 2026-04-29 17:43:04,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 19:44:04] 2026-04-29 17:43:04,854 | INFO     | aborting loop
[2026-04-29 19:44:04] 2026-04-29 17:43:05,102 | INFO     | [job] retrieve thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:05,214 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:05,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 19:44:04] 2026-04-29 17:43:05,324 | INFO     | [data] control thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:05,331 | INFO     | [payload] control thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:05,334 | INFO     | all job control threads have been joined
[2026-04-29 19:44:04] 2026-04-29 17:43:05,455 | INFO     | [payload] failed_post thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:05,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 19:44:04] 2026-04-29 17:43:05,860 | INFO     | [job] job monitor thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,007 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,023 | INFO     | [data] copytool_in thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,171 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 19:44:04] 2026-04-29 17:43:06,272 | INFO     | [payload] validate_post thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,340 | INFO     | [job] control thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,359 | INFO     | [job] validate thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:06,519 | INFO     | [job] queue monitor thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:07,282 | INFO     | [data] copytool_out thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:10,202 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 19:44:04] 2026-04-29 17:43:33,502 | INFO     | PID=26157 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-29 19:44:04] 2026-04-29 17:43:33,503 | INFO     | .. there are 2 such processes running
[2026-04-29 19:44:04] 2026-04-29 17:43:33,503 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 19:44:04] 2026-04-29 17:43:33,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 19:44:04] 2026-04-29 17:43:33,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 19:44:04] 2026-04-29 17:43:53,573 | INFO     | [monitor] cgroup control has ended
[2026-04-29 19:44:04] 2026-04-29 17:43:54,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043384698688)>', '<ExcThread(monitor, started 140042945148672)>']
[2026-04-29 19:44:04] 2026-04-29 17:43:54,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 19:44:04] 2026-04-29 17:43:54,630 | INFO     | [monitor] control thread has ended
[2026-04-29 19:44:04] 2026-04-29 17:43:59,143 | INFO     | all workflow threads have been joined
[2026-04-29 19:44:04] 2026-04-29 17:43:59,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 19:44:04] 2026-04-29 17:43:59,144 | INFO     | traces error code: 0
[2026-04-29 19:44:04] 2026-04-29 17:43:59,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 19:44:04] 2026-04-29 17:43:59,655 [wrapper] ==== pilot stdout END ====
[2026-04-29 19:44:04] 2026-04-29 17:43:59,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 19:44:04] 2026-04-29 17:43:59,890 [wrapper] pilotpid: 26157
[2026-04-29 19:44:04] 2026-04-29 17:43:59,985 [wrapper] Pilot exit status: 0
[2026-04-29 19:44:04] 2026-04-29 17:44:00,270 [wrapper] pandaids: 7118230762
[2026-04-29 19:44:04] 2026-04-29 17:44:00,894 [wrapper] cleanup supervisor_pilot  6107 26158
[2026-04-29 19:44:04] 2026-04-29 17:44:00,985 [wrapper] Test setup, not cleaning
[2026-04-29 19:44:04] 2026-04-29 17:44:01,093 [wrapper] apfmon messages muted
[2026-04-29 19:44:04] 2026-04-29 17:44:01,204 [wrapper] ==== wrapper stdout END ====
[2026-04-29 19:44:04] 2026-04-29 17:44:01,317 [wrapper] ==== wrapper stderr END ====
[2026-04-29 19:44:04]  *** Error codes and diagnostics ***
[2026-04-29 19:44:04]     "exeErrorCode": 0,
[2026-04-29 19:44:04]     "pilotErrorCode": 0,
[2026-04-29 19:44:04]  *** Listing of results directory ***
[2026-04-29 19:44:04] total 469036
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc    683926 Apr 29 05:22 pilot3.tar.gz
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc      5631 Apr 29 05:26 queuedata.json
[2026-04-29 19:44:04] -rwx------. 1 boinc boinc     36322 Apr 29 05:26 runpilot2-wrapper.sh
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc       100 Apr 29 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 19:44:04] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 13:44 run_atlas
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc       105 Apr 29 13:44 job.xml
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc      6307 Apr 29 13:44 init_data.xml
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc 259957470 Apr 29 13:44 EVNT.49863749._000009.pool.root.1
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc     15667 Apr 29 13:44 start_atlas.sh
[2026-04-29 19:44:04] drwxrwx--x. 2 boinc boinc        68 Apr 29 13:44 shared
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc    697420 Apr 29 13:44 input.tar.gz
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc         0 Apr 29 13:44 boinc_lockfile
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc      2585 Apr 29 13:44 pandaJob.out
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc       415 Apr 29 13:51 workernode_map.json
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc   1001891 Apr 29 13:51 agis_schedconf.cvmfs.json
[2026-04-29 19:44:04] drwx------. 5 boinc boinc      4096 Apr 29 13:51 pilot3
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc 211348749 Apr 29 19:41 HITS.49863752._003478.pool.root.1
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc       488 Apr 29 19:42 boinc_task_state.xml
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc        95 Apr 29 19:42 pilot_heartbeat.json
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc      1016 Apr 29 19:42 memory_monitor_summary.json
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc   1512704 Apr 29 19:42 agis_ddmendpoints.agis.ALL.json
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc    460966 Apr 29 19:42 log.49863752._003478.job.log.tgz.1
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc      6333 Apr 29 19:43 heartbeat_new.json
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc      6224 Apr 29 19:43 heartbeat.json
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc      8192 Apr 29 19:43 boinc_mmap_file
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc        28 Apr 29 19:43 wrapper_checkpoint.txt
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc      4884 Apr 29 19:43 pilotlog.txt
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc   1965871 Apr 29 19:44 log.49863752._003478.job.log.1
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc       357 Apr 29 19:44 output.list
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc       410 Apr 29 19:44 runtime_log
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc   2447360 Apr 29 19:44 result.tar.gz
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc      8455 Apr 29 19:44 runtime_log.err
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc       656 Apr 29 19:44 7a522d4c9590.diag
[2026-04-29 19:44:04] -rw-r--r--. 1 boinc boinc     20594 Apr 29 19:44 stderr.txt
[2026-04-29 19:44:04] HITS file was successfully produced:
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc 211348749 Apr 29 19:41 shared/HITS.pool.root.1
[2026-04-29 19:44:04]  *** Contents of shared directory: ***
[2026-04-29 19:44:04] total 463356
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc 259957470 Apr 29 13:44 ATLAS.root_0
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc     15667 Apr 29 13:44 start_atlas.sh
[2026-04-29 19:44:04] -rw-r--r--. 2 boinc boinc    697420 Apr 29 13:44 input.tar.gz
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc 211348749 Apr 29 19:41 HITS.pool.root.1
[2026-04-29 19:44:04] -rw-------. 1 boinc boinc   2447360 Apr 29 19:44 result.tar.gz
19:44:05 (22151): run_atlas exited; CPU time 79747.440613
19:44:05 (22151): called boinc_finish(0)

</stderr_txt>
]]>

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