Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:05:14 (682): wrapper (7.7.26015): starting
14:05:14 (682): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 14:05:14] Arguments: --nthreads 8
[2026-04-29 14:05:14] Threads: 8
[2026-04-29 14:05:14] Checking for CVMFS
[2026-04-29 14:05:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 14:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 14:05:18] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 14:05:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 14:05:20] 2.11.2.0 15723 19861 97692 159005 0 54 17830197 25165825 96 130560 0 5581006 99.901 5131537 9914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 14:05:20] CVMFS is ok
[2026-04-29 14:05:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 14:05:20] Checking for apptainer binary...
[2026-04-29 14:05:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 14:05:20] Running /usr/bin/apptainer --version
[2026-04-29 14:05:20] apptainer version 1.3.2-1.el7
[2026-04-29 14:05:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 14:05:35] cg-vwn428.simple-grid.lan
[2026-04-29 14:05:35] apptainer works
[2026-04-29 14:05:35] Set ATHENA_PROC_NUMBER=8
[2026-04-29 14:05:35] Set ATHENA_CORE_NUMBER=8
[2026-04-29 14:05:36] Starting ATLAS job with PandaID=7118211345
[2026-04-29 14:05:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 20:01:01]  *** The last 200 lines of the pilot log: ***
[2026-04-29 20:01:01] 2026-04-29 18:00:17,013 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 20:01:01] 2026-04-29 18:00:17,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 20:01:01] 2026-04-29 18:00:17,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 20:01:01] 2026-04-29 18:00:17,024 | INFO     | fitting pss+swap vs Time
[2026-04-29 20:01:01] 2026-04-29 18:00:17,025 | INFO     | sum of square deviations: 11867638328.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,029 | INFO     | sum of deviations: 197828203299.99997
[2026-04-29 20:01:01] 2026-04-29 18:00:17,029 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,029 | INFO     | mean y: 2469574.590504451
[2026-04-29 20:01:01] 2026-04-29 18:00:17,029 | INFO     | intersect: 2469574.590504451
[2026-04-29 20:01:01] 2026-04-29 18:00:17,030 | INFO     | chi2: 11.579970711940609
[2026-04-29 20:01:01] 2026-04-29 18:00:17,031 | INFO     | sum of square deviations: 11347200663.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,035 | INFO     | sum of deviations: 217176873637.00003
[2026-04-29 20:01:01] 2026-04-29 18:00:17,035 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,035 | INFO     | mean y: 2475164.5542168673
[2026-04-29 20:01:01] 2026-04-29 18:00:17,035 | INFO     | intersect: 2475164.5542168673
[2026-04-29 20:01:01] 2026-04-29 18:00:17,036 | INFO     | chi2: 10.89535642313421
[2026-04-29 20:01:01] 2026-04-29 18:00:17,036 | INFO     | current chi2=10.89535642313421 (change=5.912055443287638 %)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,036 | INFO     | right removable region: 331
[2026-04-29 20:01:01] 2026-04-29 18:00:17,037 | INFO     | sum of square deviations: 11347200663.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,041 | INFO     | sum of deviations: 71619106706.50008
[2026-04-29 20:01:01] 2026-04-29 18:00:17,041 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,041 | INFO     | mean y: 2506557.8524096385
[2026-04-29 20:01:01] 2026-04-29 18:00:17,041 | INFO     | intersect: 2506557.8524096385
[2026-04-29 20:01:01] 2026-04-29 18:00:17,042 | INFO     | chi2: 5.834524862186309
[2026-04-29 20:01:01] 2026-04-29 18:00:17,042 | INFO     | current chi2=5.834524862186309 (change=49.61537462119763 %)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,043 | INFO     | sum of square deviations: 10842205148.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,047 | INFO     | sum of deviations: -33584863208.000015
[2026-04-29 20:01:01] 2026-04-29 18:00:17,047 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,047 | INFO     | mean y: 2538318.0428134557
[2026-04-29 20:01:01] 2026-04-29 18:00:17,047 | INFO     | intersect: 2538318.0428134557
[2026-04-29 20:01:01] 2026-04-29 18:00:17,048 | INFO     | chi2: 2.1285433577417434
[2026-04-29 20:01:01] 2026-04-29 18:00:17,048 | INFO     | current chi2=2.1285433577417434 (change=63.518137157373644 %)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,049 | INFO     | sum of square deviations: 10352419220.5
[2026-04-29 20:01:01] 2026-04-29 18:00:17,052 | INFO     | sum of deviations: -83427802869.50002
[2026-04-29 20:01:01] 2026-04-29 18:00:17,053 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,053 | INFO     | mean y: 2553764.7111801244
[2026-04-29 20:01:01] 2026-04-29 18:00:17,053 | INFO     | intersect: 2553764.7111801244
[2026-04-29 20:01:01] 2026-04-29 18:00:17,054 | INFO     | chi2: 1.0508613812636525
[2026-04-29 20:01:01] 2026-04-29 18:00:17,054 | INFO     | current chi2=1.0508613812636525 (change=50.63002229005318 %)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,054 | INFO     | sum of square deviations: 9877610318.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,058 | INFO     | sum of deviations: -84247001119.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,058 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,059 | INFO     | mean y: 2554010.47318612
[2026-04-29 20:01:01] 2026-04-29 18:00:17,059 | INFO     | intersect: 2554010.47318612
[2026-04-29 20:01:01] 2026-04-29 18:00:17,059 | INFO     | chi2: 1.0306067654144302
[2026-04-29 20:01:01] 2026-04-29 18:00:17,060 | INFO     | current chi2=1.0306067654144302 (change=1.9274298409240487 %)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,060 | INFO     | left removable region: 20
[2026-04-29 20:01:01] 2026-04-29 18:00:17,060 | INFO     | sum of square deviations: 9327281860.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,064 | INFO     | sum of deviations: -61784846679.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,064 | INFO     | mean x (centered): 0.0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,064 | INFO     | mean y: 2561367.22829582
[2026-04-29 20:01:01] 2026-04-29 18:00:17,064 | INFO     | intersect: 2561367.22829582
[2026-04-29 20:01:01] 2026-04-29 18:00:17,065 | INFO     | chi2: 0.24315453931330236
[2026-04-29 20:01:01] 2026-04-29 18:00:17,065 | INFO     | current memory leak: -6.62 B/s (using 311 data points, chi2=0.24)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,066 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,066 | INFO     | ..............................
[2026-04-29 20:01:01] 2026-04-29 18:00:17,066 | INFO     | . Timing measurements:
[2026-04-29 20:01:01] 2026-04-29 18:00:17,066 | INFO     | . get job = 0 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,066 | INFO     | . initial setup = 121 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | . payload setup = 204 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | . stage-in = 0 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | . payload execution = 20651 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | . stage-out = 8 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | . log creation = 1 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,067 | INFO     | ..............................
[2026-04-29 20:01:01] 2026-04-29 18:00:17,225 | INFO     | 
[2026-04-29 20:01:01] 2026-04-29 18:00:17,225 | INFO     | job summary report
[2026-04-29 20:01:01] 2026-04-29 18:00:17,225 | INFO     | --------------------------------------------------
[2026-04-29 20:01:01] 2026-04-29 18:00:17,225 | INFO     | PanDA job id: 7118211345
[2026-04-29 20:01:01] 2026-04-29 18:00:17,225 | INFO     | task id: 49863752
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | errors: (none)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | pilot state: finished 
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | transexitcode: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | exeerrorcode: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | exeerrordiag: 
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | exitcode: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,226 | INFO     | exitmsg: OK
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | cpuconsumptiontime: 78273 s
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | nevents: 400
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | neventsw: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | pid: 9167
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | pgrp: 9167
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | corecount: 8
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | event service: False
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | sizes: {0: 2280669, 1: 2281126, 2: 2282582, 12: 2282582, 20860: 2316270, 20869: 2325452, 20870: 2325590}
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | --------------------------------------------------
[2026-04-29 20:01:01] 2026-04-29 18:00:17,227 | INFO     | 
[2026-04-29 20:01:01] 2026-04-29 18:00:17,228 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-29 20:01:01] 2026-04-29 18:00:17,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,877 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,877 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 20:01:01] 2026-04-29 18:00:17,877 | INFO     | job 7118211345 has completed (purged errors)
[2026-04-29 20:01:01] 2026-04-29 18:00:17,877 | INFO     | overall cleanup function is called
[2026-04-29 20:01:01] 2026-04-29 18:00:18,889 | INFO     | --- collectZombieJob: --- 10, [9167]
[2026-04-29 20:01:01] 2026-04-29 18:00:18,889 | INFO     | zombie collector waiting for pid 9167
[2026-04-29 20:01:01] 2026-04-29 18:00:18,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 20:01:01] 2026-04-29 18:00:18,889 | INFO     | collected zombie processes
[2026-04-29 20:01:01] 2026-04-29 18:00:18,889 | INFO     | will attempt to kill all subprocesses of pid=9167
[2026-04-29 20:01:01] 2026-04-29 18:00:18,960 | INFO     | process IDs to be killed: [9167] (in reverse order)
[2026-04-29 20:01:01] 2026-04-29 18:00:19,753 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 20:01:01] 2026-04-29 18:00:19,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 20:01:01] 2026-04-29 18:00:19,756 | INFO     | did not find any defunct processes belonging to 9167
[2026-04-29 20:01:01] 2026-04-29 18:00:19,757 | INFO     | did not find any defunct processes belonging to 9167
[2026-04-29 20:01:01] 2026-04-29 18:00:19,758 | INFO     | Ready for new job
[2026-04-29 20:01:01] 2026-04-29 18:00:19,760 | INFO     | ***************************************
[2026-04-29 20:01:01] 2026-04-29 18:00:19,760 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 20:01:01] 2026-04-29 18:00:19,760 | INFO     | ***************************************
[2026-04-29 20:01:01] 2026-04-29 18:00:19,760 | INFO     | 
[2026-04-29 20:01:01] 2026-04-29 18:00:19,768 | INFO     | pilot is running in a VM
[2026-04-29 20:01:01] 2026-04-29 18:00:19,768 | INFO     | architecture information:
[2026-04-29 20:01:01] 2026-04-29 18:00:19,780 | INFO     | executing command: cat /etc/os-release
[2026-04-29 20:01:01] 2026-04-29 18:00:20,089 | INFO     | cat /etc/os-release:
[2026-04-29 20:01:01] NAME="CentOS Linux"
[2026-04-29 20:01:01] VERSION="7 (Core)"
[2026-04-29 20:01:01] ID="centos"
[2026-04-29 20:01:01] ID_LIKE="rhel fedora"
[2026-04-29 20:01:01] VERSION_ID="7"
[2026-04-29 20:01:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 20:01:01] ANSI_COLOR="0;31"
[2026-04-29 20:01:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 20:01:01] HOME_URL="https://www.centos.org/"
[2026-04-29 20:01:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 20:01:01] 
[2026-04-29 20:01:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 20:01:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 20:01:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 20:01:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 20:01:01] 
[2026-04-29 20:01:01] 2026-04-29 18:00:20,090 | INFO     | ***************************************
[2026-04-29 20:01:01] 2026-04-29 18:00:20,593 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-29 20:01:01] 2026-04-29 18:00:20,861 | INFO     | sufficient remaining disk space (496461938688 B)
[2026-04-29 20:01:01] 2026-04-29 18:00:20,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 20:01:01] 2026-04-29 18:00:20,861 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 20:01:01] 2026-04-29 18:00:20,861 | INFO     | update_server=False
[2026-04-29 20:01:01] 2026-04-29 18:00:20,862 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 20:01:01] 2026-04-29 18:00:20,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 20:01:01] 2026-04-29 18:00:20,863 | INFO     | aborting loop
[2026-04-29 20:01:01] 2026-04-29 18:00:21,477 | INFO     | all data control threads have been joined
[2026-04-29 20:01:01] 2026-04-29 18:00:21,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 20:01:01] 2026-04-29 18:00:21,653 | INFO     | all payload control threads have been joined
[2026-04-29 20:01:01] 2026-04-29 18:00:21,868 | INFO     | [job] retrieve thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:21,869 | INFO     | [job] job monitor thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,160 | INFO     | all job control threads have been joined
[2026-04-29 20:01:01] 2026-04-29 18:00:22,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 20:01:01] 2026-04-29 18:00:22,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 20:01:01] 2026-04-29 18:00:22,440 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,475 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,483 | INFO     | [data] control thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,553 | INFO     | [payload] validate_post thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,659 | INFO     | [payload] control thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:22,783 | INFO     | [data] copytool_in thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,010 | INFO     | [payload] failed_post thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,026 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,166 | INFO     | [job] control thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,225 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,246 | INFO     | [job] queue monitor thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,312 | INFO     | [job] validate thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:23,645 | INFO     | [data] copytool_out thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:26,324 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 20:01:01] 2026-04-29 18:00:49,204 | INFO     | PID=4696 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-29 20:01:01] 2026-04-29 18:00:49,204 | INFO     | .. there are 2 such processes running
[2026-04-29 20:01:01] 2026-04-29 18:00:49,207 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 20:01:01] 2026-04-29 18:00:49,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 20:01:01] 2026-04-29 18:00:49,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 20:01:01] 2026-04-29 18:00:49,999 | INFO     | [monitor] cgroup control has ended
[2026-04-29 20:01:01] 2026-04-29 18:00:51,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478578784064)>', '<ExcThread(monitor, started 140477835765504)>']
[2026-04-29 20:01:01] 2026-04-29 18:00:52,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 20:01:01] 2026-04-29 18:00:52,225 | INFO     | [monitor] control thread has ended
[2026-04-29 20:01:01] 2026-04-29 18:00:56,516 | INFO     | all workflow threads have been joined
[2026-04-29 20:01:01] 2026-04-29 18:00:56,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 20:01:01] 2026-04-29 18:00:56,516 | INFO     | traces error code: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:56,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 20:01:01] 2026-04-29 18:00:56,926 [wrapper] ==== pilot stdout END ====
[2026-04-29 20:01:01] 2026-04-29 18:00:57,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 20:01:01] 2026-04-29 18:00:57,132 [wrapper] pilotpid: 4696
[2026-04-29 20:01:01] 2026-04-29 18:00:57,265 [wrapper] Pilot exit status: 0
[2026-04-29 20:01:01] 2026-04-29 18:00:57,753 [wrapper] pandaids: 7118211345
[2026-04-29 20:01:01] 2026-04-29 18:00:58,797 [wrapper] cleanup supervisor_pilot 17225 4697
[2026-04-29 20:01:01] 2026-04-29 18:00:58,839 [wrapper] Test setup, not cleaning
[2026-04-29 20:01:01] 2026-04-29 18:00:58,924 [wrapper] apfmon messages muted
[2026-04-29 20:01:01] 2026-04-29 18:00:59,033 [wrapper] ==== wrapper stdout END ====
[2026-04-29 20:01:01] 2026-04-29 18:00:59,101 [wrapper] ==== wrapper stderr END ====
[2026-04-29 20:01:01]  *** Error codes and diagnostics ***
[2026-04-29 20:01:01]     "exeErrorCode": 0,
[2026-04-29 20:01:01]     "pilotErrorCode": 0,
[2026-04-29 20:01:01]  *** Listing of results directory ***
[2026-04-29 20:01:01] total 466436
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc    683926 Apr 29 03:30 pilot3.tar.gz
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc      5631 Apr 29 03:48 queuedata.json
[2026-04-29 20:01:01] -rwx------. 1 boinc boinc     36322 Apr 29 03:48 runpilot2-wrapper.sh
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc       100 Apr 29 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 20:01:01] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 14:05 run_atlas
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc       105 Apr 29 14:05 job.xml
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc      6306 Apr 29 14:05 init_data.xml
[2026-04-29 20:01:01] -rw-r--r--. 2 boinc boinc 259748786 Apr 29 14:05 EVNT.49863749._000122.pool.root.1
[2026-04-29 20:01:01] -rw-r--r--. 2 boinc boinc     15667 Apr 29 14:05 start_atlas.sh
[2026-04-29 20:01:01] drwxrwx--x. 2 boinc boinc        68 Apr 29 14:05 shared
[2026-04-29 20:01:01] -rw-r--r--. 2 boinc boinc    697421 Apr 29 14:05 input.tar.gz
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc         0 Apr 29 14:05 boinc_lockfile
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc      2587 Apr 29 14:05 pandaJob.out
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc       415 Apr 29 14:12 workernode_map.json
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc   1001891 Apr 29 14:12 agis_schedconf.cvmfs.json
[2026-04-29 20:01:01] drwx------. 5 boinc boinc      4096 Apr 29 14:12 pilot3
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc 209037334 Apr 29 19:58 HITS.49863752._002945.pool.root.1
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc       489 Apr 29 19:59 boinc_task_state.xml
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc      1012 Apr 29 20:00 memory_monitor_summary.json
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc   1512704 Apr 29 20:00 agis_ddmendpoints.agis.ALL.json
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc    446452 Apr 29 20:00 log.49863752._002945.job.log.tgz.1
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc      6333 Apr 29 20:00 heartbeat_new.json
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc      6224 Apr 29 20:00 heartbeat.json
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc      8192 Apr 29 20:00 boinc_mmap_file
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc        28 Apr 29 20:00 wrapper_checkpoint.txt
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc        95 Apr 29 20:00 pilot_heartbeat.json
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc      4882 Apr 29 20:00 pilotlog.txt
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc   1915504 Apr 29 20:00 log.49863752._002945.job.log.1
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc       357 Apr 29 20:01 output.list
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc       410 Apr 29 20:01 runtime_log
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc   2375680 Apr 29 20:01 result.tar.gz
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc      8439 Apr 29 20:01 runtime_log.err
[2026-04-29 20:01:01] -rw-------. 1 boinc boinc       656 Apr 29 20:01 6377d763d848.diag
[2026-04-29 20:01:01] -rw-r--r--. 1 boinc boinc     20450 Apr 29 20:01 stderr.txt
[2026-04-29 20:01:02] HITS file was successfully produced:
[2026-04-29 20:01:02] -rw-------. 1 boinc boinc 209037334 Apr 29 19:58 shared/HITS.pool.root.1
[2026-04-29 20:01:02]  *** Contents of shared directory: ***
[2026-04-29 20:01:02] total 460824
[2026-04-29 20:01:02] -rw-r--r--. 2 boinc boinc 259748786 Apr 29 14:05 ATLAS.root_0
[2026-04-29 20:01:02] -rw-r--r--. 2 boinc boinc     15667 Apr 29 14:05 start_atlas.sh
[2026-04-29 20:01:02] -rw-r--r--. 2 boinc boinc    697421 Apr 29 14:05 input.tar.gz
[2026-04-29 20:01:02] -rw-------. 1 boinc boinc 209037334 Apr 29 19:58 HITS.pool.root.1
[2026-04-29 20:01:02] -rw-------. 1 boinc boinc   2375680 Apr 29 20:01 result.tar.gz
20:01:03 (682): run_atlas exited; CPU time 78470.513840
20:01:03 (682): called boinc_finish(0)

</stderr_txt>
]]>

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