Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-29 19:21:14 (3368): vboxwrapper version 26210
2026-04-29 19:21:14 (3368): BOINC client version: 8.2.9
2026-04-29 19:21:15 (3368): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-04-29 19:21:15 (3368): Successfully copied 'init_data.xml' to the shared directory.
2026-04-29 19:21:15 (3368): Create VM. (boinc_a29db60d0c356a10, slot#1)
2026-04-29 19:21:16 (3368): Setting Memory Size for VM. (4800MB)
2026-04-29 19:21:16 (3368): Setting CPU Count for VM. (8)
2026-04-29 19:21:16 (3368): Setting Chipset Options for VM.
2026-04-29 19:21:17 (3368): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-29 19:21:17 (3368): Setting Boot Options for VM.
2026-04-29 19:21:17 (3368): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-29 19:21:18 (3368): Enabling VM Network Access.
2026-04-29 19:21:18 (3368): Disabling USB Support for VM.
2026-04-29 19:21:18 (3368): Disabling COM Port Support for VM.
2026-04-29 19:21:18 (3368): Disabling LPT Port Support for VM.
2026-04-29 19:21:19 (3368): Disabling Audio Support for VM.
2026-04-29 19:21:19 (3368): Disabling Clipboard Support for VM.
2026-04-29 19:21:19 (3368): Disabling Drag and Drop Support for VM.
2026-04-29 19:21:19 (3368): Adding storage controller(s) to VM.
2026-04-29 19:21:20 (3368): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-29 19:21:20 (3368): Adding VirtualBox Guest Additions to VM.
2026-04-29 19:21:20 (3368): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-29 19:21:21 (3368): forwarding host port 63196 to guest port 80
2026-04-29 19:21:21 (3368): Enabling remote desktop for VM.
2026-04-29 19:21:21 (3368): Enabling shared directory for VM.
2026-04-29 19:21:22 (3368): Starting VM using VBoxManage interface. (boinc_a29db60d0c356a10, slot#1)
2026-04-29 19:21:28 (3368): Successfully started VM. (PID = '16948')
2026-04-29 19:21:28 (3368): Reporting VM Process ID to BOINC.
2026-04-29 19:21:28 (3368): Guest Log: BIOS: VirtualBox 7.1.4
2026-04-29 19:21:28 (3368): Guest Log: CPUID EDX: 0x178bfbff
2026-04-29 19:21:28 (3368): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-29 19:21:28 (3368): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-29 19:21:28 (3368): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-29 19:21:28 (3368): Detected: Web Application Enabled (http://localhost:63196)
2026-04-29 19:21:28 (3368): Detected: Remote Desktop Enabled (localhost:63199)
2026-04-29 19:21:28 (3368): Preference change detected
2026-04-29 19:21:28 (3368): Setting CPU throttle for VM. (100%)
2026-04-29 19:21:28 (3368): Setting network throttle for VM. (1024KB)
2026-04-29 19:21:29 (3368): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-29 19:21:30 (3368): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-29 19:21:30 (3368): Guest Log: BIOS: Booting from Hard Disk...
2026-04-29 19:21:33 (3368): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-29 19:21:33 (3368): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-29 19:21:33 (3368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-29 19:21:38 (3368): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-29 19:21:38 (3368): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-29 19:21:44 (3368): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000185 main     Log opened 2026-04-29T19:21:41.888359000Z
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000308 main     OS Product: Linux
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000478 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000690 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000694 main     Process ID: 1377
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.000695 main     Package type: LINUX_64BITS_GENERIC
2026-04-29 19:21:44 (3368): Guest Log: 00:00:00.001990 main     5.2.32 r132073 started. Verbose level = 0
2026-04-29 19:21:44 (3368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-29 19:21:44 (3368): Guest Log: [INFO] Mounting shared directory
2026-04-29 19:21:44 (3368): Guest Log: [INFO] Checking for init_data.xml
2026-04-29 19:21:50 (3368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-29 19:21:50 (3368): Guest Log: [INFO] Detected branch: prod
2026-04-29 19:21:50 (3368): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-29 19:21:50 (3368): Guest Log: Copying input files
2026-04-29 19:21:51 (3368): Guest Log: Copied input files into RunAtlas.
2026-04-29 19:21:52 (3368): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2026-04-29 19:21:54 (3368): Guest Log: 00:00:10.507535 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 525 482 000ns (GuestNow=1 777 504 914 417 465 000 ns GuestLast=1 777 490 501 891 983 000 ns fSetTimeLastLoop=true )
2026-04-29 19:21:59 (3368): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-29 19:21:59 (3368): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-29 19:21:59 (3368): Guest Log: 2.6.3.0 1661 0 31588 159024 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2026-04-29 19:22:00 (3368): Guest Log: copied the webapp to /var/www
2026-04-29 19:22:00 (3368): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-29 19:22:00 (3368): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-29 19:22:00 (3368): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-29 19:22:00 (3368): Guest Log:  *** Starting ATLAS job. (PandaID=7117684656 taskID=49863840) ***
2026-04-29 21:01:31 (3368): Status Report: Elapsed Time: '6000.000000'
2026-04-29 21:01:31 (3368): Status Report: CPU Time: '44781.875000'
2026-04-29 21:08:02 (3368): Guest Log:  *** Job finished ***
2026-04-29 21:08:02 (3368): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:49,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:49,288 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:50,486 | INFO     | [monitor] cgroup control has ended
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:52,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706159781696)>', '<ExcThread(monitor, started 140705108309760)>']
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:52,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:52,837 | INFO     | [monitor] control thread has ended
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,305 | INFO     | all workflow threads have been joined
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,305 | INFO     | end of generic workflow (traces error code: 0)
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,305 | INFO     | traces error code: 0
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,392 [wrapper] ==== pilot stdout END ====
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,398 [wrapper] ==== wrapper stdout RESUME ====
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,405 [wrapper] pilotpid: 6107
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,412 [wrapper] Pilot exit status: 0
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,440 [wrapper] pandaids: 7117684656
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,479 [wrapper] cleanup supervisor_pilot 26396 6108
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,487 [wrapper] Test setup, not cleaning
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,494 [wrapper] apfmon messages muted
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,500 [wrapper] ==== wrapper stdout END ====
2026-04-29 21:08:02 (3368): Guest Log: 2026-04-30 01:07:58,507 [wrapper] ==== wrapper stderr END ====
2026-04-29 21:08:02 (3368): Guest Log:  *** Error codes and diagnostics ***
2026-04-29 21:08:02 (3368): Guest Log:     "exeErrorCode": 0,
2026-04-29 21:08:02 (3368): Guest Log:     "pilotErrorCode": 0,
2026-04-29 21:08:02 (3368): Guest Log:  *** Listing of results directory ***
2026-04-29 21:08:02 (3368): Guest Log: total 219672
2026-04-29 21:08:02 (3368): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 21:30 pilot3.tar.gz
2026-04-29 21:08:02 (3368): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 21:31 queuedata.json
2026-04-29 21:08:02 (3368): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 21:32 runpilot2-wrapper.sh
2026-04-29 21:08:02 (3368): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 29 23:21 start_atlas.sh
2026-04-29 21:08:02 (3368): Guest Log: -rwxr-xr-x. 1 atlas atlas    697413 Apr 29 23:21 input.tar.gz
2026-04-29 21:08:02 (3368): Guest Log: -rwxr-xr-x. 1 atlas atlas      9212 Apr 29 23:21 init_data.xml
2026-04-29 21:08:02 (3368): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 29 23:21 EVNT.49863838._000042.pool.root.1 -> /data/./ATLAS.root_0
2026-04-29 21:08:02 (3368): Guest Log: -rw-r--r--. 1 atlas atlas      2590 Apr 29 23:21 pandaJob.out
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas        48 Apr 29 23:22 setup.sh.local
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas   1001891 Apr 29 23:22 agis_schedconf.cvmfs.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 29 23:22 agis_ddmendpoints.agis.ALL.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas       425 Apr 29 23:22 workernode_map.json
2026-04-29 21:08:02 (3368): Guest Log: drwx------. 5 atlas atlas      4096 Apr 29 23:22 pilot3
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas 219057916 Apr 30 01:06 HITS.49863840._001043.pool.root.1
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas      1038 Apr 30 01:07 memory_monitor_summary.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas    316284 Apr 30 01:07 log.49863840._001043.job.log.tgz.1
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas      6356 Apr 30 01:07 heartbeat_new.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas      6247 Apr 30 01:07 heartbeat.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas        95 Apr 30 01:07 pilot_heartbeat.json
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas      4804 Apr 30 01:07 pilotlog.txt
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas    592421 Apr 30 01:07 log.49863840._001043.job.log.1
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas       357 Apr 30 01:07 output.list
2026-04-29 21:08:02 (3368): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 30 01:07 runtime_log
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas    921600 Apr 30 01:07 result.tar.gz
2026-04-29 21:08:02 (3368): Guest Log: -rw-r--r--. 1 atlas atlas      8843 Apr 30 01:07 runtime_log.err
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas       656 Apr 30 01:07 276ebf780172.diag
2026-04-29 21:08:02 (3368): Guest Log: Looking for outputfile HITS.49863840._001043.pool.root.1
2026-04-29 21:08:02 (3368): Guest Log: HITS file was successfully produced
2026-04-29 21:08:02 (3368): Guest Log: -rw-------. 1 atlas atlas 219057916 Apr 30 01:06 /home/atlas/RunAtlas/HITS.49863840._001043.pool.root.1
2026-04-29 21:08:03 (3368): Guest Log: Successfully finished the ATLAS job!
2026-04-29 21:08:03 (3368): Guest Log: Copying the results back to the shared directory!
2026-04-29 21:08:03 (3368): Guest Log:  *** Contents of shared directory: ***
2026-04-29 21:08:03 (3368): Guest Log: total 473144
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root 263787091 Apr 29 23:21 ATLAS.root_0
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root 219057916 Apr 30  2026 HITS.pool.root.1
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root      9212 Apr 29 23:21 init_data.xml
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root    697413 Apr 29 00:10 input.tar.gz
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root    921600 Apr 30  2026 result.tar.gz
2026-04-29 21:08:03 (3368): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 29 00:10 start_atlas.sh
2026-04-29 21:08:03 (3368): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-29 21:08:03 (3368): VM Completion File Detected.
2026-04-29 21:08:03 (3368): Powering off VM.
2026-04-29 21:08:04 (3368): Successfully stopped VM.
2026-04-29 21:08:04 (3368): Deregistering VM. (boinc_a29db60d0c356a10, slot#1)
2026-04-29 21:08:04 (3368): Removing network bandwidth throttle group from VM.
2026-04-29 21:08:04 (3368): Removing VM from VirtualBox.
2026-04-29 21:08:09 (3368): called boinc_finish(0)

</stderr_txt>
]]>

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