Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:31 (5523): wrapper (7.7.26015): starting
11:32:31 (5523): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 11:32:31] Arguments: --nthreads 8
[2026-04-29 11:32:31] Threads: 8
[2026-04-29 11:32:31] Checking for CVMFS
[2026-04-29 11:32:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 11:32:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 11:32:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 11:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 11:32:35] 2.11.2.0 14708 19723 98564 159001 1 53 21600827 25165824 96 130560 0 8679265 99.816 8163871 3604 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 11:32:35] CVMFS is ok
[2026-04-29 11:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 11:32:35] Checking for apptainer binary...
[2026-04-29 11:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 11:32:35] Running /usr/bin/apptainer --version
[2026-04-29 11:32:35] apptainer version 1.3.2-1.el7
[2026-04-29 11:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 11:32:57] cg-vwn445.simple-grid.lan
[2026-04-29 11:32:57] apptainer works
[2026-04-29 11:32:57] Set ATHENA_PROC_NUMBER=8
[2026-04-29 11:32:57] Set ATHENA_CORE_NUMBER=8
[2026-04-29 11:32:57] Starting ATLAS job with PandaID=7118108295
[2026-04-29 11:32:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 17:00:45]  *** The last 200 lines of the pilot log: ***
[2026-04-29 17:00:45] 2026-04-29 14:59:47,327 | INFO     | this job has now completed (state=finished)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,327 | INFO     | log transfer has been attempted: DONE
[2026-04-29 17:00:45] 2026-04-29 14:59:47,327 | INFO     | job 7118108295 has finished - writing final server update
[2026-04-29 17:00:45] 2026-04-29 14:59:47,328 | INFO     | total number of processed events: 400 (read)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,330 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7118108295/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,331 | INFO     | extracted standard info from prmon json
[2026-04-29 17:00:45] 2026-04-29 14:59:47,331 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 17:00:45] 2026-04-29 14:59:47,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 17:00:45] 2026-04-29 14:59:47,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 17:00:45] 2026-04-29 14:59:47,339 | INFO     | fitting pss+swap vs Time
[2026-04-29 17:00:45] 2026-04-29 14:59:47,339 | INFO     | sum of square deviations: 9059954057.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,345 | INFO     | sum of deviations: 167808792318.50003
[2026-04-29 17:00:45] 2026-04-29 14:59:47,345 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,345 | INFO     | mean y: 2461462.438311688
[2026-04-29 17:00:45] 2026-04-29 14:59:47,345 | INFO     | intersect: 2461462.438311688
[2026-04-29 17:00:45] 2026-04-29 14:59:47,346 | INFO     | chi2: 8.116744052671905
[2026-04-29 17:00:45] 2026-04-29 14:59:47,347 | INFO     | sum of square deviations: 8625843592.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,350 | INFO     | sum of deviations: 186228633009.99997
[2026-04-29 17:00:45] 2026-04-29 14:59:47,350 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,350 | INFO     | mean y: 2467833.894389439
[2026-04-29 17:00:45] 2026-04-29 14:59:47,350 | INFO     | intersect: 2467833.894389439
[2026-04-29 17:00:45] 2026-04-29 14:59:47,351 | INFO     | chi2: 7.3327582540332585
[2026-04-29 17:00:45] 2026-04-29 14:59:47,351 | INFO     | current chi2=7.3327582540332585 (change=9.658870521863633 %)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,351 | INFO     | right removable region: 302
[2026-04-29 17:00:45] 2026-04-29 14:59:47,352 | INFO     | sum of square deviations: 8625843592.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,355 | INFO     | sum of deviations: 58591708349.000015
[2026-04-29 17:00:45] 2026-04-29 14:59:47,355 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,355 | INFO     | mean y: 2499811.399339934
[2026-04-29 17:00:45] 2026-04-29 14:59:47,356 | INFO     | intersect: 2499811.399339934
[2026-04-29 17:00:45] 2026-04-29 14:59:47,356 | INFO     | chi2: 3.185116432509771
[2026-04-29 17:00:45] 2026-04-29 14:59:47,356 | INFO     | current chi2=3.185116432509771 (change=60.75869324151868 %)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,357 | INFO     | sum of square deviations: 8205826414.5
[2026-04-29 17:00:45] 2026-04-29 14:59:47,360 | INFO     | sum of deviations: -13340626983.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,360 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,360 | INFO     | mean y: 2525855.9597315434
[2026-04-29 17:00:45] 2026-04-29 14:59:47,360 | INFO     | intersect: 2525855.9597315434
[2026-04-29 17:00:45] 2026-04-29 14:59:47,361 | INFO     | chi2: 0.9719431931575478
[2026-04-29 17:00:45] 2026-04-29 14:59:47,361 | INFO     | current chi2=0.9719431931575478 (change=69.48484572692098 %)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,361 | INFO     | sum of square deviations: 7799669962.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,364 | INFO     | sum of deviations: -20270176536.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,365 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,365 | INFO     | mean y: 2528426.276450512
[2026-04-29 17:00:45] 2026-04-29 14:59:47,368 | INFO     | intersect: 2528426.276450512
[2026-04-29 17:00:45] 2026-04-29 14:59:47,369 | INFO     | chi2: 0.9208244994440049
[2026-04-29 17:00:45] 2026-04-29 14:59:47,369 | INFO     | current chi2=0.9208244994440049 (change=5.25943224598074 %)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,369 | INFO     | left removable region: 15
[2026-04-29 17:00:45] 2026-04-29 14:59:47,370 | INFO     | sum of square deviations: 7330250928.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,372 | INFO     | sum of deviations: 233190555.99999875
[2026-04-29 17:00:45] 2026-04-29 14:59:47,373 | INFO     | mean x (centered): 0.0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,373 | INFO     | mean y: 2536282.087108014
[2026-04-29 17:00:45] 2026-04-29 14:59:47,373 | INFO     | intersect: 2536282.087108014
[2026-04-29 17:00:45] 2026-04-29 14:59:47,373 | INFO     | chi2: 0.06210581979919314
[2026-04-29 17:00:45] 2026-04-29 14:59:47,374 | INFO     | current memory leak: 0.03 B/s (using 287 data points, chi2=0.06)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,374 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | ..............................
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . Timing measurements:
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . get job = 0 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . initial setup = 134 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . payload setup = 270 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . stage-in = 0 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . payload execution = 18889 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . stage-out = 4 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,375 | INFO     | . log creation = 1 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,376 | INFO     | ..............................
[2026-04-29 17:00:45] 2026-04-29 14:59:47,991 | INFO     | 
[2026-04-29 17:00:45] 2026-04-29 14:59:47,991 | INFO     | job summary report
[2026-04-29 17:00:45] 2026-04-29 14:59:47,991 | INFO     | --------------------------------------------------
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | PanDA job id: 7118108295
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | task id: 49863860
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | errors: (none)
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | pilot state: finished 
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | transexitcode: 0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | exeerrorcode: 0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | exeerrordiag: 
[2026-04-29 17:00:45] 2026-04-29 14:59:47,992 | INFO     | exitcode: 0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | exitmsg: OK
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | cpuconsumptiontime: 72016 s
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | nevents: 400
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | neventsw: 0
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | pid: 13957
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | pgrp: 13957
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | corecount: 8
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | event service: False
[2026-04-29 17:00:45] 2026-04-29 14:59:47,993 | INFO     | sizes: {0: 2280066, 1: 2253326, 2: 2282553, 13: 2282581, 19163: 2315372, 19164: 2315371, 19169: 2324555, 19171: 2324611, 19172: 2324805}
[2026-04-29 17:00:45] 2026-04-29 14:59:47,994 | INFO     | --------------------------------------------------
[2026-04-29 17:00:45] 2026-04-29 14:59:47,994 | INFO     | 
[2026-04-29 17:00:45] 2026-04-29 14:59:47,994 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | job 7118108295 has completed (purged errors)
[2026-04-29 17:00:45] 2026-04-29 14:59:48,387 | INFO     | overall cleanup function is called
[2026-04-29 17:00:45] 2026-04-29 14:59:49,396 | INFO     | --- collectZombieJob: --- 10, [13957]
[2026-04-29 17:00:45] 2026-04-29 14:59:49,396 | INFO     | zombie collector waiting for pid 13957
[2026-04-29 17:00:45] 2026-04-29 14:59:49,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 17:00:45] 2026-04-29 14:59:49,397 | INFO     | collected zombie processes
[2026-04-29 17:00:45] 2026-04-29 14:59:49,397 | INFO     | will attempt to kill all subprocesses of pid=13957
[2026-04-29 17:00:45] 2026-04-29 14:59:49,458 | INFO     | process IDs to be killed: [13957] (in reverse order)
[2026-04-29 17:00:45] 2026-04-29 14:59:50,518 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 17:00:45] 2026-04-29 14:59:50,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 17:00:45] 2026-04-29 14:59:50,521 | INFO     | did not find any defunct processes belonging to 13957
[2026-04-29 17:00:45] 2026-04-29 14:59:50,523 | INFO     | did not find any defunct processes belonging to 13957
[2026-04-29 17:00:45] 2026-04-29 14:59:50,523 | INFO     | Ready for new job
[2026-04-29 17:00:45] 2026-04-29 14:59:50,525 | INFO     | ***************************************
[2026-04-29 17:00:45] 2026-04-29 14:59:50,525 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 17:00:45] 2026-04-29 14:59:50,525 | INFO     | ***************************************
[2026-04-29 17:00:45] 2026-04-29 14:59:50,525 | INFO     | 
[2026-04-29 17:00:45] 2026-04-29 14:59:50,526 | INFO     | pilot is running in a VM
[2026-04-29 17:00:45] 2026-04-29 14:59:50,526 | INFO     | architecture information:
[2026-04-29 17:00:45] 2026-04-29 14:59:50,536 | INFO     | executing command: cat /etc/os-release
[2026-04-29 17:00:45] 2026-04-29 14:59:50,863 | INFO     | cat /etc/os-release:
[2026-04-29 17:00:45] NAME="CentOS Linux"
[2026-04-29 17:00:45] VERSION="7 (Core)"
[2026-04-29 17:00:45] ID="centos"
[2026-04-29 17:00:45] ID_LIKE="rhel fedora"
[2026-04-29 17:00:45] VERSION_ID="7"
[2026-04-29 17:00:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 17:00:45] ANSI_COLOR="0;31"
[2026-04-29 17:00:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 17:00:45] HOME_URL="https://www.centos.org/"
[2026-04-29 17:00:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 17:00:45] 
[2026-04-29 17:00:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 17:00:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 17:00:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 17:00:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 17:00:45] 
[2026-04-29 17:00:45] 2026-04-29 14:59:50,863 | INFO     | ***************************************
[2026-04-29 17:00:45] 2026-04-29 14:59:51,368 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-29 17:00:45] 2026-04-29 14:59:51,628 | INFO     | sufficient remaining disk space (494308163584 B)
[2026-04-29 17:00:45] 2026-04-29 14:59:51,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 17:00:45] 2026-04-29 14:59:51,628 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 17:00:45] 2026-04-29 14:59:51,629 | INFO     | update_server=False
[2026-04-29 17:00:45] 2026-04-29 14:59:51,629 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 17:00:45] 2026-04-29 14:59:51,683 | INFO     | all data control threads have been joined
[2026-04-29 17:00:45] 2026-04-29 14:59:52,198 | INFO     | all job control threads have been joined
[2026-04-29 17:00:45] 2026-04-29 14:59:52,279 | INFO     | all payload control threads have been joined
[2026-04-29 17:00:45] 2026-04-29 14:59:52,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:00:45] 2026-04-29 14:59:52,438 | INFO     | aborting loop
[2026-04-29 17:00:45] 2026-04-29 14:59:52,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 17:00:45] 2026-04-29 14:59:52,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:00:45] 2026-04-29 14:59:52,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 17:00:45] 2026-04-29 14:59:52,634 | INFO     | [job] retrieve thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:52,689 | INFO     | [data] control thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:52,906 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:52,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,025 | INFO     | [payload] validate_post thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,122 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,131 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,204 | INFO     | [job] control thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,284 | INFO     | [job] validate thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,285 | INFO     | [payload] control thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,399 | INFO     | [data] copytool_in thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,444 | INFO     | [job] job monitor thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,556 | INFO     | [job] queue monitor thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:53,594 | INFO     | [payload] failed_post thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:54,554 | INFO     | [data] copytool_out thread has finished
[2026-04-29 17:00:45] 2026-04-29 14:59:56,581 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 17:00:45] 2026-04-29 15:00:21,371 | INFO     | PID=9499 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-29 17:00:45] 2026-04-29 15:00:21,371 | INFO     | .. there are 2 such processes running
[2026-04-29 17:00:45] 2026-04-29 15:00:21,372 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 17:00:45] 2026-04-29 15:00:21,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 17:00:45] 2026-04-29 15:00:21,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 17:00:45] 2026-04-29 15:00:34,153 | INFO     | [monitor] cgroup control has ended
[2026-04-29 17:00:45] 2026-04-29 15:00:35,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208989878080)>', '<ExcThread(monitor, started 140208167171840)>']
[2026-04-29 17:00:45] 2026-04-29 15:00:36,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 17:00:45] 2026-04-29 15:00:36,462 | INFO     | [monitor] control thread has ended
[2026-04-29 17:00:45] 2026-04-29 15:00:40,755 | INFO     | all workflow threads have been joined
[2026-04-29 17:00:45] 2026-04-29 15:00:40,755 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 17:00:45] 2026-04-29 15:00:40,756 | INFO     | traces error code: 0
[2026-04-29 17:00:45] 2026-04-29 15:00:40,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 17:00:45] 2026-04-29 15:00:41,168 [wrapper] ==== pilot stdout END ====
[2026-04-29 17:00:45] 2026-04-29 15:00:41,256 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 17:00:45] 2026-04-29 15:00:41,312 [wrapper] pilotpid: 9499
[2026-04-29 17:00:45] 2026-04-29 15:00:41,380 [wrapper] Pilot exit status: 0
[2026-04-29 17:00:45] 2026-04-29 15:00:41,823 [wrapper] pandaids: 7118108295
[2026-04-29 17:00:45] 2026-04-29 15:00:42,776 [wrapper] cleanup supervisor_pilot 21683 9500
[2026-04-29 17:00:45] 2026-04-29 15:00:42,894 [wrapper] Test setup, not cleaning
[2026-04-29 17:00:45] 2026-04-29 15:00:42,976 [wrapper] apfmon messages muted
[2026-04-29 17:00:45] 2026-04-29 15:00:43,053 [wrapper] ==== wrapper stdout END ====
[2026-04-29 17:00:45] 2026-04-29 15:00:43,149 [wrapper] ==== wrapper stderr END ====
[2026-04-29 17:00:45]  *** Error codes and diagnostics ***
[2026-04-29 17:00:45]     "exeErrorCode": 0,
[2026-04-29 17:00:45]     "pilotErrorCode": 0,
[2026-04-29 17:00:45]  *** Listing of results directory ***
[2026-04-29 17:00:45] total 470116
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc    683926 Apr 29 00:44 pilot3.tar.gz
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc      5631 Apr 29 01:02 queuedata.json
[2026-04-29 17:00:45] -rwx------. 1 boinc boinc     36322 Apr 29 01:03 runpilot2-wrapper.sh
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc       100 Apr 29 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 17:00:45] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 11:32 run_atlas
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc       105 Apr 29 11:32 job.xml
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc      6308 Apr 29 11:32 init_data.xml
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc 260400009 Apr 29 11:32 EVNT.49863858._000132.pool.root.1
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc     15667 Apr 29 11:32 start_atlas.sh
[2026-04-29 17:00:45] drwxrwx--x. 2 boinc boinc        68 Apr 29 11:32 shared
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc    697418 Apr 29 11:32 input.tar.gz
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc         0 Apr 29 11:32 boinc_lockfile
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc      2585 Apr 29 11:32 pandaJob.out
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc       415 Apr 29 11:39 workernode_map.json
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc   1001891 Apr 29 11:40 agis_schedconf.cvmfs.json
[2026-04-29 17:00:45] drwx------. 5 boinc boinc      4096 Apr 29 11:40 pilot3
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc 212398145 Apr 29 16:58 HITS.49863860._003308.pool.root.1
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc       489 Apr 29 16:58 boinc_task_state.xml
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc      1015 Apr 29 16:59 memory_monitor_summary.json
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc   1512704 Apr 29 16:59 agis_ddmendpoints.agis.ALL.json
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc        95 Apr 29 16:59 pilot_heartbeat.json
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc    448852 Apr 29 16:59 log.49863860._003308.job.log.tgz.1
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc      6337 Apr 29 16:59 heartbeat_new.json
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc      6228 Apr 29 16:59 heartbeat.json
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc        28 Apr 29 17:00 wrapper_checkpoint.txt
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc      8192 Apr 29 17:00 boinc_mmap_file
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc      4883 Apr 29 17:00 pilotlog.txt
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc   1784670 Apr 29 17:00 log.49863860._003308.job.log.1
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc       357 Apr 29 17:00 output.list
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc       410 Apr 29 17:00 runtime_log
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc   2252800 Apr 29 17:00 result.tar.gz
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc      8455 Apr 29 17:00 runtime_log.err
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc       656 Apr 29 17:00 3cb832d5f333.diag
[2026-04-29 17:00:45] -rw-r--r--. 1 boinc boinc     20650 Apr 29 17:00 stderr.txt
[2026-04-29 17:00:45] HITS file was successfully produced:
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc 212398145 Apr 29 16:58 shared/HITS.pool.root.1
[2026-04-29 17:00:45]  *** Contents of shared directory: ***
[2026-04-29 17:00:45] total 464624
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc 260400009 Apr 29 11:32 ATLAS.root_0
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc     15667 Apr 29 11:32 start_atlas.sh
[2026-04-29 17:00:45] -rw-r--r--. 2 boinc boinc    697418 Apr 29 11:32 input.tar.gz
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc 212398145 Apr 29 16:58 HITS.pool.root.1
[2026-04-29 17:00:45] -rw-------. 1 boinc boinc   2252800 Apr 29 17:00 result.tar.gz
17:00:46 (5523): run_atlas exited; CPU time 72204.062557
17:00:46 (5523): called boinc_finish(0)

</stderr_txt>
]]>

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