Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-01 06:16:46 (25932): vboxwrapper version 26210
2026-05-01 06:16:46 (25932): BOINC client version: 8.2.9
2026-05-01 06:16:47 (25932): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-05-01 06:16:48 (25932): Successfully copied 'init_data.xml' to the shared directory.
2026-05-01 06:16:49 (25932): Create VM. (boinc_d08c6d888fd2eb61, slot#3)
2026-05-01 06:16:50 (25932): Setting Memory Size for VM. (6600MB)
2026-05-01 06:16:50 (25932): Setting CPU Count for VM. (4)
2026-05-01 06:16:51 (25932): Setting Chipset Options for VM.
2026-05-01 06:16:52 (25932): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-01 06:16:52 (25932): Setting Boot Options for VM.
2026-05-01 06:16:54 (25932): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-01 06:16:55 (25932): Enabling VM Network Access.
2026-05-01 06:16:56 (25932): Disabling USB Support for VM.
2026-05-01 06:16:56 (25932): Disabling COM Port Support for VM.
2026-05-01 06:16:58 (25932): Disabling LPT Port Support for VM.
2026-05-01 06:16:58 (25932): Disabling Audio Support for VM.
2026-05-01 06:16:59 (25932): Disabling Clipboard Support for VM.
2026-05-01 06:16:59 (25932): Disabling Drag and Drop Support for VM.
2026-05-01 06:17:00 (25932): Adding storage controller(s) to VM.
2026-05-01 06:17:00 (25932): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-01 06:17:02 (25932): Adding VirtualBox Guest Additions to VM.
2026-05-01 06:17:02 (25932): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-01 06:17:03 (25932): forwarding host port 64552 to guest port 80
2026-05-01 06:17:04 (25932): Enabling remote desktop for VM.
2026-05-01 06:17:05 (25932): Enabling shared directory for VM.
2026-05-01 06:17:07 (25932): Starting VM using VBoxManage interface. (boinc_d08c6d888fd2eb61, slot#3)
2026-05-01 06:17:15 (25932): Successfully started VM. (PID = '5836')
2026-05-01 06:17:15 (25932): Reporting VM Process ID to BOINC.
2026-05-01 06:17:15 (25932): Guest Log: BIOS: VirtualBox 7.1.12
2026-05-01 06:17:15 (25932): Guest Log: CPUID EDX: 0x178bfbff
2026-05-01 06:17:15 (25932): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-01 06:17:15 (25932): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-01 06:17:15 (25932): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-01 06:17:15 (25932): Detected: Web Application Enabled (http://localhost:64552)
2026-05-01 06:17:15 (25932): Detected: Remote Desktop Enabled (localhost:64553)
2026-05-01 06:17:15 (25932): Preference change detected
2026-05-01 06:17:15 (25932): Setting CPU throttle for VM. (100%)
2026-05-01 06:17:16 (25932): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-01 06:17:17 (25932): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-01 06:17:17 (25932): Guest Log: BIOS: Booting from Hard Disk...
2026-05-01 06:17:20 (25932): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-01 06:17:20 (25932): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-01 06:17:20 (25932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-01 06:17:27 (25932): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-01 06:17:27 (25932): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-01 06:17:39 (25932): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000223 main     Log opened 2026-05-01T06:17:37.570655000Z
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000373 main     OS Product: Linux
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000411 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000477 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000510 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000511 main     Process ID: 1378
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.000512 main     Package type: LINUX_64BITS_GENERIC
2026-05-01 06:17:39 (25932): Guest Log: 00:00:00.011408 main     5.2.32 r132073 started. Verbose level = 0
2026-05-01 06:17:40 (25932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-01 06:17:40 (25932): Guest Log: [INFO] Mounting shared directory
2026-05-01 06:17:40 (25932): Guest Log: [INFO] Checking for init_data.xml
2026-05-01 06:17:45 (25932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-01 06:17:45 (25932): Guest Log: [INFO] Detected branch: prod
2026-05-01 06:17:45 (25932): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-01 06:17:45 (25932): Guest Log: Copying input files
2026-05-01 06:17:50 (25932): Guest Log: Copied input files into RunAtlas.
2026-05-01 06:17:50 (25932): Guest Log: 00:00:10.022238 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 074 784 000ns (GuestNow=1 777 612 669 515 925 000 ns GuestLast=1 777 616 257 590 709 000 ns fSetTimeLastLoop=true )
2026-05-01 06:17:50 (25932): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2026-05-01 06:17:59 (25932): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-01 06:17:59 (25932): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-01 06:17:59 (25932): Guest Log: 2.6.3.0 1655 0 31516 159079 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2026-05-01 06:18:00 (25932): Guest Log: copied the webapp to /var/www
2026-05-01 06:18:00 (25932): Guest Log: ATHENA_PROC_NUMBER=4
2026-05-01 06:18:00 (25932): Guest Log: ATHENA_CORE_NUMBER=4
2026-05-01 06:18:00 (25932): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-01 06:18:00 (25932): Guest Log:  *** Starting ATLAS job. (PandaID=7116797926 taskID=49863840) ***
2026-05-01 07:57:28 (25932): Status Report: Elapsed Time: '6000.000000'
2026-05-01 07:57:28 (25932): Status Report: CPU Time: '20899.062500'
2026-05-01 09:37:36 (25932): Status Report: Elapsed Time: '12000.000000'
2026-05-01 09:37:36 (25932): Status Report: CPU Time: '43998.343750'
2026-05-01 11:17:55 (25932): Status Report: Elapsed Time: '18000.000000'
2026-05-01 11:17:55 (25932): Status Report: CPU Time: '66327.921875'
2026-05-01 11:29:10 (25932): Guest Log:  *** Job finished ***
2026-05-01 11:29:10 (25932): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | INFO     | PID=6072 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | INFO     | found 0 job(s) in 20 queues
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:05,640 | INFO     | [monitor] control thread has ended
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,285 | INFO     | all workflow threads have been joined
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,285 | INFO     | end of generic workflow (traces error code: 0)
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,285 | INFO     | traces error code: 0
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,403 [wrapper] ==== pilot stdout END ====
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,409 [wrapper] ==== wrapper stdout RESUME ====
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,415 [wrapper] pilotpid: 6072
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,420 [wrapper] Pilot exit status: 0
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,453 [wrapper] pandaids: 7116797926
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,488 [wrapper] cleanup supervisor_pilot 30009 6073
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,499 [wrapper] Test setup, not cleaning
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,505 [wrapper] apfmon messages muted
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,510 [wrapper] ==== wrapper stdout END ====
2026-05-01 11:29:10 (25932): Guest Log: 2026-05-01 10:29:09,516 [wrapper] ==== wrapper stderr END ====
2026-05-01 11:29:10 (25932): Guest Log:  *** Error codes and diagnostics ***
2026-05-01 11:29:10 (25932): Guest Log:     "exeErrorCode": 0,
2026-05-01 11:29:10 (25932): Guest Log:     "pilotErrorCode": 0,
2026-05-01 11:29:10 (25932): Guest Log:  *** Listing of results directory ***
2026-05-01 11:29:10 (25932): Guest Log: total 214132
2026-05-01 11:29:10 (25932): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 18:48 runpilot2-wrapper.sh
2026-05-01 11:29:10 (25932): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 22:44 pilot3.tar.gz
2026-05-01 11:29:10 (25932): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 22:53 queuedata.json
2026-05-01 11:29:10 (25932): Guest Log: -rwxr-xr-x. 1 atlas atlas      9216 May  1 05:17 init_data.xml
2026-05-01 11:29:10 (25932): Guest Log: -rwxr-xr-x. 1 atlas atlas    697426 May  1 05:17 input.tar.gz
2026-05-01 11:29:10 (25932): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May  1 05:17 start_atlas.sh
2026-05-01 11:29:10 (25932): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  1 05:17 EVNT.49863838._000028.pool.root.1 -> /data/./ATLAS.root_0
2026-05-01 11:29:10 (25932): Guest Log: -rw-r--r--. 1 atlas atlas      2588 May  1 05:18 pandaJob.out
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas        50 May  1 05:18 setup.sh.local
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas   1001806 May  1 05:19 agis_schedconf.cvmfs.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas       411 May  1 05:19 workernode_map.json
2026-05-01 11:29:10 (25932): Guest Log: drwx------. 5 atlas atlas      4096 May  1 05:19 pilot3
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas 211091833 May  1 10:27 HITS.49863840._000691.pool.root.1
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas        95 May  1 10:28 pilot_heartbeat.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas      1031 May  1 10:28 memory_monitor_summary.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas   1508687 May  1 10:28 agis_ddmendpoints.agis.ALL.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas    374501 May  1 10:28 log.49863840._000691.job.log.tgz.1
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas      6342 May  1 10:28 heartbeat_new.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas      6233 May  1 10:28 heartbeat.json
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas      4876 May  1 10:29 pilotlog.txt
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas   1680436 May  1 10:29 log.49863840._000691.job.log.1
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas       357 May  1 10:29 output.list
2026-05-01 11:29:10 (25932): Guest Log: -rw-r--r--. 1 atlas atlas       410 May  1 10:29 runtime_log
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas   2068480 May  1 10:29 result.tar.gz
2026-05-01 11:29:10 (25932): Guest Log: -rw-r--r--. 1 atlas atlas      8839 May  1 10:29 runtime_log.err
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas       654 May  1 10:29 00e9cd68344c.diag
2026-05-01 11:29:10 (25932): Guest Log: Looking for outputfile HITS.49863840._000691.pool.root.1
2026-05-01 11:29:10 (25932): Guest Log: HITS file was successfully produced
2026-05-01 11:29:10 (25932): Guest Log: -rw-------. 1 atlas atlas 211091833 May  1 10:27 /home/atlas/RunAtlas/HITS.49863840._000691.pool.root.1
2026-05-01 11:29:11 (25932): Guest Log: Successfully finished the ATLAS job!
2026-05-01 11:29:11 (25932): Guest Log: Copying the results back to the shared directory!
2026-05-01 11:29:11 (25932): Guest Log:  *** Contents of shared directory: ***
2026-05-01 11:29:11 (25932): Guest Log: total 463208
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root 260430223 May  1 05:16 ATLAS.root_0
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root 211091833 May  1 10:29 HITS.pool.root.1
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root      9216 May  1 05:16 init_data.xml
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root    697426 Apr 28 23:58 input.tar.gz
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root   2068480 May  1 10:29 result.tar.gz
2026-05-01 11:29:11 (25932): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 23:58 start_atlas.sh
2026-05-01 11:29:11 (25932): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-01 11:29:11 (25932): VM Completion File Detected.
2026-05-01 11:29:11 (25932): Powering off VM.
2026-05-01 11:29:12 (25932): Successfully stopped VM.
2026-05-01 11:29:12 (25932): Deregistering VM. (boinc_d08c6d888fd2eb61, slot#3)
2026-05-01 11:29:12 (25932): Removing network bandwidth throttle group from VM.
2026-05-01 11:29:12 (25932): Removing VM from VirtualBox.
2026-05-01 11:29:17 (25932): called boinc_finish(0)

</stderr_txt>
]]>

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