Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:34:08 (3518267): wrapper (7.7.26015): starting
19:34:08 (3518267): wrapper: running run_atlas (--nthreads 9)
[2026-04-28 19:34:08] Arguments: --nthreads 9
[2026-04-28 19:34:08] Threads: 9
[2026-04-28 19:34:08] Checking for CVMFS
[2026-04-28 19:34:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 19:34:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 19:34:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 19:34:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 19:34:09] 2.13.3.0 1263916 174548 423804 158986 3 510 38710194 40960000 15290 16776704 0 392768983 99.589 425305346 39891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-28 19:34:09] CVMFS is ok
[2026-04-28 19:34:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 19:34:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 19:34:09] Further information can be found at the LHC@home message board.
[2026-04-28 19:34:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 19:34:09] Checking for apptainer binary...
[2026-04-28 19:34:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 19:34:09] Running /usr/bin/apptainer --version
[2026-04-28 19:34:09] apptainer version 1.4.5-3.el9
[2026-04-28 19:34:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 19:34:09] c-206-34.aglt2.org
[2026-04-28 19:34:09] apptainer works
[2026-04-28 19:34:09] Set ATHENA_PROC_NUMBER=9
[2026-04-28 19:34:09] Set ATHENA_CORE_NUMBER=9
[2026-04-28 19:34:10] Starting ATLAS job with PandaID=7117949467
[2026-04-28 19:34:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 02:10:42]  *** The last 200 lines of the pilot log: ***
[2026-04-29 02:10:42] 2026-04-29 06:10:09,127 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-29 02:10:42] 2026-04-29 06:10:09,128 | INFO     | this job has now completed (state=finished)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,128 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,128 | INFO     | log transfer has been attempted: DONE
[2026-04-29 02:10:42] 2026-04-29 06:10:09,128 | INFO     | job 7117949467 has finished - writing final server update
[2026-04-29 02:10:42] 2026-04-29 06:10:09,128 | INFO     | total number of processed events: 400 (read)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,137 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7117949467/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,138 | INFO     | extracted standard info from prmon json
[2026-04-29 02:10:42] 2026-04-29 06:10:09,138 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 02:10:42] 2026-04-29 06:10:09,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 02:10:42] 2026-04-29 06:10:09,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 02:10:42] 2026-04-29 06:10:09,144 | INFO     | fitting pss+swap vs Time
[2026-04-29 02:10:42] 2026-04-29 06:10:09,144 | INFO     | sum of square deviations: 18111428912.997307
[2026-04-29 02:10:42] 2026-04-29 06:10:09,147 | INFO     | sum of deviations: 163285157739.9458
[2026-04-29 02:10:42] 2026-04-29 06:10:09,148 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,148 | INFO     | mean y: 2552884.9458762887
[2026-04-29 02:10:42] 2026-04-29 06:10:09,148 | INFO     | intersect: 2552884.9458762887
[2026-04-29 02:10:42] 2026-04-29 06:10:09,148 | INFO     | chi2: 6.298899520021068
[2026-04-29 02:10:42] 2026-04-29 06:10:09,149 | INFO     | sum of square deviations: 17420256211.744106
[2026-04-29 02:10:42] 2026-04-29 06:10:09,152 | INFO     | sum of deviations: 188220719705.79086
[2026-04-29 02:10:42] 2026-04-29 06:10:09,152 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,152 | INFO     | mean y: 2558323.472584856
[2026-04-29 02:10:42] 2026-04-29 06:10:09,152 | INFO     | intersect: 2558323.472584856
[2026-04-29 02:10:42] 2026-04-29 06:10:09,152 | INFO     | chi2: 5.522110165552045
[2026-04-29 02:10:42] 2026-04-29 06:10:09,153 | INFO     | current chi2=5.522110165552045 (change=12.332143924506116 %)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,153 | INFO     | right removable region: 382
[2026-04-29 02:10:42] 2026-04-29 06:10:09,153 | INFO     | sum of square deviations: 17420138481.7441
[2026-04-29 02:10:42] 2026-04-29 06:10:09,156 | INFO     | sum of deviations: 15462733694.020882
[2026-04-29 02:10:42] 2026-04-29 06:10:09,156 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,156 | INFO     | mean y: 2585491.652741514
[2026-04-29 02:10:42] 2026-04-29 06:10:09,156 | INFO     | intersect: 2585491.652741514
[2026-04-29 02:10:42] 2026-04-29 06:10:09,157 | INFO     | chi2: 1.2700195773141028
[2026-04-29 02:10:42] 2026-04-29 06:10:09,157 | INFO     | current chi2=1.2700195773141028 (change=79.83743710663518 %)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,157 | INFO     | sum of square deviations: 16746662337.957666
[2026-04-29 02:10:42] 2026-04-29 06:10:09,160 | INFO     | sum of deviations: -21495892837.333332
[2026-04-29 02:10:42] 2026-04-29 06:10:09,160 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,160 | INFO     | mean y: 2593826.8333333335
[2026-04-29 02:10:42] 2026-04-29 06:10:09,160 | INFO     | intersect: 2593826.8333333335
[2026-04-29 02:10:42] 2026-04-29 06:10:09,161 | INFO     | chi2: 0.8378505012192909
[2026-04-29 02:10:42] 2026-04-29 06:10:09,161 | INFO     | current chi2=0.8378505012192909 (change=34.02853655286034 %)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,161 | INFO     | sum of square deviations: 16090767919.136747
[2026-04-29 02:10:42] 2026-04-29 06:10:09,164 | INFO     | sum of deviations: -21651460433.31636
[2026-04-29 02:10:42] 2026-04-29 06:10:09,164 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,164 | INFO     | mean y: 2593861.587131367
[2026-04-29 02:10:42] 2026-04-29 06:10:09,164 | INFO     | intersect: 2593861.587131367
[2026-04-29 02:10:42] 2026-04-29 06:10:09,165 | INFO     | chi2: 0.8377582121845739
[2026-04-29 02:10:42] 2026-04-29 06:10:09,165 | INFO     | current chi2=0.8377582121845739 (change=0.011014976369021155 %)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,165 | INFO     | left removable region: 15
[2026-04-29 02:10:42] 2026-04-29 06:10:09,165 | INFO     | sum of square deviations: 15326716321.504202
[2026-04-29 02:10:42] 2026-04-29 06:10:09,168 | INFO     | sum of deviations: 4563687187.269759
[2026-04-29 02:10:42] 2026-04-29 06:10:09,168 | INFO     | mean x (centered): 0.0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,168 | INFO     | mean y: 2600054.7084468664
[2026-04-29 02:10:42] 2026-04-29 06:10:09,168 | INFO     | intersect: 2600054.7084468664
[2026-04-29 02:10:42] 2026-04-29 06:10:09,169 | INFO     | chi2: 0.015874793961736855
[2026-04-29 02:10:42] 2026-04-29 06:10:09,169 | INFO     | current memory leak: 0.30 B/s (using 367 data points, chi2=0.02)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,169 | INFO     | could have reported an average CPU frequency of 3278 MHz (17 samples)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,169 | INFO     | ..............................
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . Timing measurements:
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . get job = 0 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . initial setup = 16 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . payload setup = 33 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . stage-in = 0 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . payload execution = 23669 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . stage-out = 2 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | . log creation = 0 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,170 | INFO     | ..............................
[2026-04-29 02:10:42] 2026-04-29 06:10:09,242 | INFO     | 
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | job summary report
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | --------------------------------------------------
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | PanDA job id: 7117949467
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | task id: 49863840
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | errors: (none)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | pilot state: finished 
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | transexitcode: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | exeerrorcode: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | exeerrordiag: 
[2026-04-29 02:10:42] 2026-04-29 06:10:09,244 | INFO     | exitcode: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | exitmsg: OK
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | cpuconsumptiontime: 47373 s
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | nevents: 400
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | neventsw: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | pid: 3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | pgrp: 3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | corecount: 9
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | event service: False
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | sizes: {0: 2280727, 1: 2282556, 12: 2282556, 23706: 2317668, 23707: 2317667, 23709: 2326721, 23710: 2327163}
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | --------------------------------------------------
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | 
[2026-04-29 02:10:42] 2026-04-29 06:10:09,245 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-29 02:10:42] 2026-04-29 06:10:09,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,471 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,480 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 02:10:42] 2026-04-29 06:10:09,481 | INFO     | job 7117949467 has completed (purged errors)
[2026-04-29 02:10:42] 2026-04-29 06:10:09,481 | INFO     | overall cleanup function is called
[2026-04-29 02:10:42] 2026-04-29 06:10:10,532 | INFO     | --- collectZombieJob: --- 10, [3527597]
[2026-04-29 02:10:42] 2026-04-29 06:10:10,532 | INFO     | zombie collector waiting for pid 3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:10,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 02:10:42] 2026-04-29 06:10:10,532 | INFO     | collected zombie processes
[2026-04-29 02:10:42] 2026-04-29 06:10:10,532 | INFO     | will attempt to kill all subprocesses of pid=3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:11,109 | INFO     | process IDs to be killed: [3527597] (in reverse order)
[2026-04-29 02:10:42] 2026-04-29 06:10:11,370 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 02:10:42] 2026-04-29 06:10:11,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 02:10:42] 2026-04-29 06:10:11,384 | INFO     | did not find any defunct processes belonging to 3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:11,396 | INFO     | did not find any defunct processes belonging to 3527597
[2026-04-29 02:10:42] 2026-04-29 06:10:11,396 | INFO     | Ready for new job
[2026-04-29 02:10:42] 2026-04-29 06:10:11,399 | INFO     | ***************************************
[2026-04-29 02:10:42] 2026-04-29 06:10:11,400 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 02:10:42] 2026-04-29 06:10:11,400 | INFO     | ***************************************
[2026-04-29 02:10:42] 2026-04-29 06:10:11,400 | INFO     | 
[2026-04-29 02:10:42] 2026-04-29 06:10:11,420 | INFO     | architecture information:
[2026-04-29 02:10:42] 2026-04-29 06:10:11,429 | INFO     | executing command: cat /etc/os-release
[2026-04-29 02:10:42] 2026-04-29 06:10:11,501 | INFO     | cat /etc/os-release:
[2026-04-29 02:10:42] NAME="CentOS Linux"
[2026-04-29 02:10:42] VERSION="7 (Core)"
[2026-04-29 02:10:42] ID="centos"
[2026-04-29 02:10:42] ID_LIKE="rhel fedora"
[2026-04-29 02:10:42] VERSION_ID="7"
[2026-04-29 02:10:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 02:10:42] ANSI_COLOR="0;31"
[2026-04-29 02:10:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 02:10:42] HOME_URL="https://www.centos.org/"
[2026-04-29 02:10:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 02:10:42] 
[2026-04-29 02:10:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 02:10:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 02:10:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 02:10:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 02:10:42] 
[2026-04-29 02:10:42] 2026-04-29 06:10:11,501 | INFO     | ***************************************
[2026-04-29 02:10:42] 2026-04-29 06:10:12,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-29 02:10:42] 2026-04-29 06:10:12,078 | INFO     | sufficient remaining disk space (84181778432 B)
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | INFO     | update_server=False
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:10:42] 2026-04-29 06:10:12,079 | INFO     | aborting loop
[2026-04-29 02:10:42] 2026-04-29 06:10:12,323 | INFO     | all data control threads have been joined
[2026-04-29 02:10:42] 2026-04-29 06:10:12,361 | INFO     | all payload control threads have been joined
[2026-04-29 02:10:42] 2026-04-29 06:10:13,073 | INFO     | all job control threads have been joined
[2026-04-29 02:10:42] 2026-04-29 06:10:13,084 | INFO     | [job] retrieve thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,088 | INFO     | [job] job monitor thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,329 | INFO     | [data] control thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,367 | INFO     | [payload] control thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,493 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,805 | INFO     | [payload] failed_post thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,839 | INFO     | [job] validate thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,854 | INFO     | [payload] validate_post thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,875 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:13,875 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:14,081 | INFO     | [job] control thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:14,085 | INFO     | [data] copytool_out thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:14,216 | INFO     | [data] copytool_in thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:14,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:10:42] 2026-04-29 06:10:14,501 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:15,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 02:10:42] 2026-04-29 06:10:15,265 | INFO     | [job] queue monitor thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:19,149 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 02:10:42] 2026-04-29 06:10:29,619 | INFO     | [monitor] cgroup control has ended
[2026-04-29 02:10:42] 2026-04-29 06:10:29,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790346721088)>', '<ExcThread(monitor, started 139789886015232)>']
[2026-04-29 02:10:42] 2026-04-29 06:10:34,979 | INFO     | all workflow threads have been joined
[2026-04-29 02:10:42] 2026-04-29 06:10:34,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 02:10:42] 2026-04-29 06:10:34,979 | INFO     | traces error code: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:34,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 02:10:42] 2026-04-29 06:10:41,041 | INFO     | PID=3522538 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 02:10:42] 2026-04-29 06:10:41,042 | INFO     | .. there are 12 such processes running
[2026-04-29 02:10:42] 2026-04-29 06:10:41,043 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 02:10:42] 2026-04-29 06:10:41,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 02:10:42] 2026-04-29 06:10:41,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 02:10:42] 2026-04-29 06:10:41,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 02:10:42] 2026-04-29 06:10:41,043 | INFO     | [monitor] control thread has ended
[2026-04-29 02:10:42] 2026-04-29 06:10:41,171 [wrapper] ==== pilot stdout END ====
[2026-04-29 02:10:42] 2026-04-29 06:10:41,174 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 02:10:42] 2026-04-29 06:10:41,176 [wrapper] pilotpid: 3522538
[2026-04-29 02:10:42] 2026-04-29 06:10:41,179 [wrapper] Pilot exit status: 0
[2026-04-29 02:10:42] 2026-04-29 06:10:41,203 [wrapper] pandaids: 7117949467
[2026-04-29 02:10:42] 2026-04-29 06:10:41,500 [wrapper] cleanup supervisor_pilot  106032 3522539
[2026-04-29 02:10:42] 2026-04-29 06:10:41,525 [wrapper] Test setup, not cleaning
[2026-04-29 02:10:42] 2026-04-29 06:10:41,564 [wrapper] apfmon messages muted
[2026-04-29 02:10:42] 2026-04-29 06:10:41,611 [wrapper] ==== wrapper stdout END ====
[2026-04-29 02:10:42] 2026-04-29 06:10:41,644 [wrapper] ==== wrapper stderr END ====
[2026-04-29 02:10:42]  *** Error codes and diagnostics ***
[2026-04-29 02:10:42]     "exeErrorCode": 0,
[2026-04-29 02:10:42]     "pilotErrorCode": 0,
[2026-04-29 02:10:42]  *** Listing of results directory ***
[2026-04-29 02:10:42] total 480904
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas      5631 Apr 28 18:09 queuedata.json
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas    683926 Apr 28 18:09 pilot3.tar.gz
[2026-04-29 02:10:42] -rwx------. 1 boincer umatlas     36322 Apr 28 18:10 runpilot2-wrapper.sh
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas       100 Apr 28 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 02:10:42] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 28 19:34 run_atlas
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas       105 Apr 28 19:34 job.xml
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas 261712893 Apr 28 19:34 EVNT.49863838._000045.pool.root.1
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 19:34 start_atlas.sh
[2026-04-29 02:10:42] drwxrwx--x. 2 boincer umatlas      4096 Apr 28 19:34 shared
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas    697419 Apr 28 19:34 input.tar.gz
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas         0 Apr 28 19:34 boinc_lockfile
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas      2590 Apr 28 19:34 pandaJob.out
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas        57 Apr 28 19:34 setup.sh.local
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas   1001138 Apr 28 19:34 agis_schedconf.cvmfs.json
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas       426 Apr 28 19:34 workernode_map.json
[2026-04-29 02:10:42] drwx------. 5 boincer umatlas      4096 Apr 28 19:34 pilot3
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas 221503550 Apr 29 02:09 HITS.49863840._001129.pool.root.1
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas       488 Apr 29 02:09 boinc_task_state.xml
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas      1034 Apr 29 02:10 memory_monitor_summary.json
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas   1512704 Apr 29 02:10 agis_ddmendpoints.agis.ALL.json
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas    502662 Apr 29 02:10 log.49863840._001129.job.log.tgz.1
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas      6346 Apr 29 02:10 heartbeat_new.json
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas      6237 Apr 29 02:10 heartbeat.json
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas      6825 Apr 29 02:10 init_data.xml
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 02:10 boinc_mmap_file
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas        28 Apr 29 02:10 wrapper_checkpoint.txt
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas        95 Apr 29 02:10 pilot_heartbeat.json
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas       823 Apr 29 02:10 pilotlog.txt
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas   2041662 Apr 29 02:10 log.49863840._001129.job.log.1
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas       357 Apr 29 02:10 output.list
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas       410 Apr 29 02:10 runtime_log
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas   2560000 Apr 29 02:10 result.tar.gz
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas      8965 Apr 29 02:10 runtime_log.err
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas       655 Apr 29 02:10 3057b3ff2d01.diag
[2026-04-29 02:10:42] -rw-r--r--. 1 boincer umatlas     20849 Apr 29 02:10 stderr.txt
[2026-04-29 02:10:42] HITS file was successfully produced:
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas 221503550 Apr 29 02:09 shared/HITS.pool.root.1
[2026-04-29 02:10:42]  *** Contents of shared directory: ***
[2026-04-29 02:10:42] total 475104
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas 261712893 Apr 28 19:34 ATLAS.root_0
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 19:34 start_atlas.sh
[2026-04-29 02:10:42] -rw-r--r--. 2 boincer umatlas    697419 Apr 28 19:34 input.tar.gz
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas 221503550 Apr 29 02:09 HITS.pool.root.1
[2026-04-29 02:10:42] -rw-------. 1 boincer umatlas   2560000 Apr 29 02:10 result.tar.gz
02:10:44 (3518267): run_atlas exited; CPU time 47817.657234
02:10:44 (3518267): called boinc_finish(0)

</stderr_txt>
]]>

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