Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:39:08 (3172399): wrapper (7.7.26015): starting
17:39:08 (3172399): wrapper: running run_atlas (--nthreads 9)
[2026-04-28 17:39:08] Arguments: --nthreads 9
[2026-04-28 17:39:08] Threads: 9
[2026-04-28 17:39:08] Checking for CVMFS
[2026-04-28 17:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 17:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 17:39:10] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 17:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 17:39:11] 2.13.3.0 13170 1782 154548 158982 0 658 34488338 40960001 28093 16776704 0 7369711 99.709 4846623 36123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-28 17:39:11] CVMFS is ok
[2026-04-28 17:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 17:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 17:39:11] Further information can be found at the LHC@home message board.
[2026-04-28 17:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 17:39:11] Checking for apptainer binary...
[2026-04-28 17:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 17:39:11] Running /usr/bin/apptainer --version
[2026-04-28 17:39:11] apptainer version 1.4.5-3.el9
[2026-04-28 17:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 17:39:12] c6-8-12-2.aglt2.org
[2026-04-28 17:39:12] apptainer works
[2026-04-28 17:39:12] Set ATHENA_PROC_NUMBER=9
[2026-04-28 17:39:12] Set ATHENA_CORE_NUMBER=9
[2026-04-28 17:39:12] Starting ATLAS job with PandaID=7116905487
[2026-04-28 17:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 00:45:20]  *** The last 200 lines of the pilot log: ***
[2026-04-29 00:45:20] 2026-04-29 04:44:26,594 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-29 00:45:20] 2026-04-29 04:44:26,595 | INFO     | this job has now completed (state=finished)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,595 | INFO     | log transfer has been attempted: DONE
[2026-04-29 00:45:20] 2026-04-29 04:44:26,595 | INFO     | job 7116905487 has finished - writing final server update
[2026-04-29 00:45:20] 2026-04-29 04:44:26,595 | INFO     | total number of processed events: 400 (read)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,617 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7116905487/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,617 | INFO     | extracted standard info from prmon json
[2026-04-29 00:45:20] 2026-04-29 04:44:26,617 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 00:45:20] 2026-04-29 04:44:26,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 00:45:20] 2026-04-29 04:44:26,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 00:45:20] 2026-04-29 04:44:26,627 | INFO     | fitting pss+swap vs Time
[2026-04-29 00:45:20] 2026-04-29 04:44:26,628 | INFO     | sum of square deviations: 22001729266.88157
[2026-04-29 00:45:20] 2026-04-29 04:44:26,635 | INFO     | sum of deviations: 236155818808.90094
[2026-04-29 00:45:20] 2026-04-29 04:44:26,636 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,636 | INFO     | mean y: 2537103.842995169
[2026-04-29 00:45:20] 2026-04-29 04:44:26,636 | INFO     | intersect: 2537103.842995169
[2026-04-29 00:45:20] 2026-04-29 04:44:26,636 | INFO     | chi2: 5.746992714960014
[2026-04-29 00:45:20] 2026-04-29 04:44:26,638 | INFO     | sum of square deviations: 21214049834.029263
[2026-04-29 00:45:20] 2026-04-29 04:44:26,642 | INFO     | sum of deviations: 262049869205.0317
[2026-04-29 00:45:20] 2026-04-29 04:44:26,642 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,642 | INFO     | mean y: 2542063.2665036675
[2026-04-29 00:45:20] 2026-04-29 04:44:26,642 | INFO     | intersect: 2542063.2665036675
[2026-04-29 00:45:20] 2026-04-29 04:44:26,643 | INFO     | chi2: 4.971051731938569
[2026-04-29 00:45:20] 2026-04-29 04:44:26,643 | INFO     | current chi2=4.971051731938569 (change=13.501687256390472 %)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,643 | INFO     | right removable region: 408
[2026-04-29 00:45:20] 2026-04-29 04:44:26,643 | INFO     | sum of square deviations: 21214053498.200478
[2026-04-29 00:45:20] 2026-04-29 04:44:26,647 | INFO     | sum of deviations: 97832330996.23706
[2026-04-29 00:45:20] 2026-04-29 04:44:26,647 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,647 | INFO     | mean y: 2563859.163814181
[2026-04-29 00:45:20] 2026-04-29 04:44:26,647 | INFO     | intersect: 2563859.163814181
[2026-04-29 00:45:20] 2026-04-29 04:44:26,648 | INFO     | chi2: 1.7855004918800148
[2026-04-29 00:45:20] 2026-04-29 04:44:26,648 | INFO     | current chi2=1.7855004918800148 (change=68.93156855354674 %)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,648 | INFO     | sum of square deviations: 20445501501.911064
[2026-04-29 00:45:20] 2026-04-29 04:44:26,651 | INFO     | sum of deviations: 37921339690.39612
[2026-04-29 00:45:20] 2026-04-29 04:44:26,652 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,654 | INFO     | mean y: 2575717.2326732674
[2026-04-29 00:45:20] 2026-04-29 04:44:26,654 | INFO     | intersect: 2575717.2326732674
[2026-04-29 00:45:20] 2026-04-29 04:44:26,654 | INFO     | chi2: 0.9917459162819268
[2026-04-29 00:45:20] 2026-04-29 04:44:26,654 | INFO     | current chi2=0.9917459162819268 (change=44.45557865751785 %)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,655 | INFO     | sum of square deviations: 19695764467.568935
[2026-04-29 00:45:20] 2026-04-29 04:44:26,662 | INFO     | sum of deviations: 11487341043.566406
[2026-04-29 00:45:20] 2026-04-29 04:44:26,662 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,662 | INFO     | mean y: 2581088.2431077696
[2026-04-29 00:45:20] 2026-04-29 04:44:26,662 | INFO     | intersect: 2581088.2431077696
[2026-04-29 00:45:20] 2026-04-29 04:44:26,663 | INFO     | chi2: 0.8610458710318624
[2026-04-29 00:45:20] 2026-04-29 04:44:26,663 | INFO     | current chi2=0.8610458710318624 (change=13.17878330571415 %)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,663 | INFO     | left removable region: 15
[2026-04-29 00:45:20] 2026-04-29 04:44:26,664 | INFO     | sum of square deviations: 18820429589.969593
[2026-04-29 00:45:20] 2026-04-29 04:44:26,672 | INFO     | sum of deviations: 39044216980.4504
[2026-04-29 00:45:20] 2026-04-29 04:44:26,672 | INFO     | mean x (centered): 0.0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,672 | INFO     | mean y: 2586776.5190839693
[2026-04-29 00:45:20] 2026-04-29 04:44:26,672 | INFO     | intersect: 2586776.5190839693
[2026-04-29 00:45:20] 2026-04-29 04:44:26,673 | INFO     | chi2: 0.05480606497798302
[2026-04-29 00:45:20] 2026-04-29 04:44:26,673 | INFO     | current memory leak: 2.07 B/s (using 393 data points, chi2=0.05)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | could have reported an average CPU frequency of 3129 MHz (18 samples)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | ..............................
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . Timing measurements:
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . get job = 0 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . initial setup = 44 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . payload setup = 106 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . stage-in = 0 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . payload execution = 25243 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . stage-out = 5 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,674 | INFO     | . log creation = 0 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,679 | INFO     | ..............................
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | 
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | job summary report
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | --------------------------------------------------
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | PanDA job id: 7116905487
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | task id: 49863771
[2026-04-29 00:45:20] 2026-04-29 04:44:26,843 | INFO     | errors: (none)
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | pilot state: finished 
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | transexitcode: 0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | exeerrorcode: 0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | exeerrordiag: 
[2026-04-29 00:45:20] 2026-04-29 04:44:26,844 | INFO     | exitcode: 0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | exitmsg: OK
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | cpuconsumptiontime: 53476 s
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | nevents: 400
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | neventsw: 0
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | pid: 3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | pgrp: 3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | corecount: 9
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | event service: False
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | sizes: {0: 2280004, 2: 2280605, 3: 2280717, 4: 2271694, 5: 2282602, 17: 2282602, 25353: 2318334, 25354: 2318333, 25360: 2327387, 25363: 2327443, 25364: 2327637}
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | --------------------------------------------------
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | 
[2026-04-29 00:45:20] 2026-04-29 04:44:26,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-29 00:45:20] 2026-04-29 04:44:27,007 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,007 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,007 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,007 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 00:45:20] 2026-04-29 04:44:27,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,009 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 00:45:20] 2026-04-29 04:44:27,009 | INFO     | job 7116905487 has completed (purged errors)
[2026-04-29 00:45:20] 2026-04-29 04:44:27,009 | INFO     | overall cleanup function is called
[2026-04-29 00:45:20] 2026-04-29 04:44:28,025 | INFO     | --- collectZombieJob: --- 10, [3195886]
[2026-04-29 00:45:20] 2026-04-29 04:44:28,026 | INFO     | zombie collector waiting for pid 3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:28,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 00:45:20] 2026-04-29 04:44:28,026 | INFO     | collected zombie processes
[2026-04-29 00:45:20] 2026-04-29 04:44:28,026 | INFO     | will attempt to kill all subprocesses of pid=3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:29,451 | INFO     | process IDs to be killed: [3195886] (in reverse order)
[2026-04-29 00:45:20] 2026-04-29 04:44:29,679 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 00:45:20] 2026-04-29 04:44:29,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 00:45:20] 2026-04-29 04:44:29,744 | INFO     | did not find any defunct processes belonging to 3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:29,857 | INFO     | did not find any defunct processes belonging to 3195886
[2026-04-29 00:45:20] 2026-04-29 04:44:29,857 | INFO     | Ready for new job
[2026-04-29 00:45:20] 2026-04-29 04:44:29,938 | INFO     | ***************************************
[2026-04-29 00:45:20] 2026-04-29 04:44:29,938 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 00:45:20] 2026-04-29 04:44:29,938 | INFO     | ***************************************
[2026-04-29 00:45:20] 2026-04-29 04:44:29,938 | INFO     | 
[2026-04-29 00:45:20] 2026-04-29 04:44:29,948 | INFO     | architecture information:
[2026-04-29 00:45:20] 2026-04-29 04:44:29,949 | INFO     | executing command: cat /etc/os-release
[2026-04-29 00:45:20] 2026-04-29 04:44:30,077 | INFO     | cat /etc/os-release:
[2026-04-29 00:45:20] NAME="CentOS Linux"
[2026-04-29 00:45:20] VERSION="7 (Core)"
[2026-04-29 00:45:20] ID="centos"
[2026-04-29 00:45:20] ID_LIKE="rhel fedora"
[2026-04-29 00:45:20] VERSION_ID="7"
[2026-04-29 00:45:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 00:45:20] ANSI_COLOR="0;31"
[2026-04-29 00:45:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 00:45:20] HOME_URL="https://www.centos.org/"
[2026-04-29 00:45:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 00:45:20] 
[2026-04-29 00:45:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 00:45:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 00:45:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 00:45:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 00:45:20] 
[2026-04-29 00:45:20] 2026-04-29 04:44:30,077 | INFO     | ***************************************
[2026-04-29 00:45:20] 2026-04-29 04:44:30,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-29 00:45:20] 2026-04-29 04:44:30,646 | INFO     | sufficient remaining disk space (64966623232 B)
[2026-04-29 00:45:20] 2026-04-29 04:44:30,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 00:45:20] 2026-04-29 04:44:30,646 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 00:45:20] 2026-04-29 04:44:30,647 | INFO     | update_server=False
[2026-04-29 00:45:20] 2026-04-29 04:44:30,647 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 00:45:20] 2026-04-29 04:44:30,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 00:45:20] 2026-04-29 04:44:30,969 | INFO     | all data control threads have been joined
[2026-04-29 00:45:20] 2026-04-29 04:44:31,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 00:45:20] 2026-04-29 04:44:31,244 | INFO     | aborting loop
[2026-04-29 00:45:20] 2026-04-29 04:44:31,333 | INFO     | all job control threads have been joined
[2026-04-29 00:45:20] 2026-04-29 04:44:31,653 | INFO     | [job] retrieve thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:31,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 00:45:20] 2026-04-29 04:44:31,966 | INFO     | all payload control threads have been joined
[2026-04-29 00:45:20] 2026-04-29 04:44:31,976 | INFO     | [data] control thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,251 | INFO     | [job] job monitor thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,347 | INFO     | [data] copytool_in thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,350 | INFO     | [job] control thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 00:45:20] 2026-04-29 04:44:32,878 | INFO     | [data] copytool_out thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,953 | INFO     | [job] queue monitor thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:32,975 | INFO     | [payload] control thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,058 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,058 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,058 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,088 | INFO     | [payload] failed_post thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,088 | INFO     | [payload] validate_post thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,124 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:33,124 | INFO     | [job] validate thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:44:36,696 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 00:45:20] 2026-04-29 04:45:00,048 | INFO     | PID=3178689 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 00:45:20] 2026-04-29 04:45:00,053 | INFO     | .. there are 39 such processes running
[2026-04-29 00:45:20] 2026-04-29 04:45:00,053 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 00:45:20] 2026-04-29 04:45:00,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 00:45:20] 2026-04-29 04:45:00,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 00:45:20] 2026-04-29 04:45:12,296 | INFO     | [monitor] cgroup control has ended
[2026-04-29 00:45:20] 2026-04-29 04:45:13,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430936520512)>', '<ExcThread(monitor, started 140430297511680)>']
[2026-04-29 00:45:20] 2026-04-29 04:45:14,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 00:45:20] 2026-04-29 04:45:14,214 | INFO     | [monitor] control thread has ended
[2026-04-29 00:45:20] 2026-04-29 04:45:18,334 | INFO     | all workflow threads have been joined
[2026-04-29 00:45:20] 2026-04-29 04:45:18,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 00:45:20] 2026-04-29 04:45:18,335 | INFO     | traces error code: 0
[2026-04-29 00:45:20] 2026-04-29 04:45:18,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 00:45:20] 2026-04-29 04:45:18,772 [wrapper] ==== pilot stdout END ====
[2026-04-29 00:45:20] 2026-04-29 04:45:18,794 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 00:45:20] 2026-04-29 04:45:18,856 [wrapper] pilotpid: 3178689
[2026-04-29 00:45:20] 2026-04-29 04:45:18,927 [wrapper] Pilot exit status: 0
[2026-04-29 00:45:20] 2026-04-29 04:45:19,052 [wrapper] pandaids: 7116905487
[2026-04-29 00:45:20] 2026-04-29 04:45:19,295 [wrapper] cleanup supervisor_pilot  584803 3178690
[2026-04-29 00:45:20] 2026-04-29 04:45:19,337 [wrapper] Test setup, not cleaning
[2026-04-29 00:45:20] 2026-04-29 04:45:19,364 [wrapper] apfmon messages muted
[2026-04-29 00:45:20] 2026-04-29 04:45:19,384 [wrapper] ==== wrapper stdout END ====
[2026-04-29 00:45:20] 2026-04-29 04:45:19,406 [wrapper] ==== wrapper stderr END ====
[2026-04-29 00:45:20]  *** Error codes and diagnostics ***
[2026-04-29 00:45:20]     "exeErrorCode": 0,
[2026-04-29 00:45:20]     "pilotErrorCode": 0,
[2026-04-29 00:45:20]  *** Listing of results directory ***
[2026-04-29 00:45:20] total 474404
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas    683926 Apr 28 15:44 pilot3.tar.gz
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas      5631 Apr 28 15:48 queuedata.json
[2026-04-29 00:45:20] -rwx------. 1 boincer umatlas     36322 Apr 28 15:48 runpilot2-wrapper.sh
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas       100 Apr 28 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 00:45:20] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 28 17:39 run_atlas
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas       105 Apr 28 17:39 job.xml
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas 262850241 Apr 28 17:39 EVNT.49863768._000042.pool.root.1
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 17:39 start_atlas.sh
[2026-04-29 00:45:20] drwxrwx--x. 2 boincer umatlas      4096 Apr 28 17:39 shared
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas    697415 Apr 28 17:39 input.tar.gz
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas         0 Apr 28 17:39 boinc_lockfile
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas      2574 Apr 28 17:39 pandaJob.out
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas        57 Apr 28 17:39 setup.sh.local
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas   1001138 Apr 28 17:40 agis_schedconf.cvmfs.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas       435 Apr 28 17:41 workernode_map.json
[2026-04-29 00:45:20] drwx------. 5 boincer umatlas      4096 Apr 28 17:41 pilot3
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas      6755 Apr 29 00:40 init_data.xml
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas 213623130 Apr 29 00:43 HITS.49863771._001048.pool.root.1
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas       489 Apr 29 00:43 boinc_task_state.xml
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas      1042 Apr 29 00:44 memory_monitor_summary.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas   1512704 Apr 29 00:44 agis_ddmendpoints.agis.ALL.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas    518405 Apr 29 00:44 log.49863771._001048.job.log.tgz.1
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas        95 Apr 29 00:44 pilot_heartbeat.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas      6402 Apr 29 00:44 heartbeat_new.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas      6293 Apr 29 00:44 heartbeat.json
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas      4823 Apr 29 00:45 pilotlog.txt
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 00:45 boinc_mmap_file
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas        28 Apr 29 00:45 wrapper_checkpoint.txt
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas   2069568 Apr 29 00:45 log.49863771._001048.job.log.1
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas       357 Apr 29 00:45 output.list
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas       410 Apr 29 00:45 runtime_log
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas   2600960 Apr 29 00:45 result.tar.gz
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas      8970 Apr 29 00:45 runtime_log.err
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas       657 Apr 29 00:45 0efd20a61f7a.diag
[2026-04-29 00:45:20] -rw-r--r--. 1 boincer umatlas     21101 Apr 29 00:45 stderr.txt
[2026-04-29 00:45:20] HITS file was successfully produced:
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas 213623130 Apr 29 00:43 shared/HITS.pool.root.1
[2026-04-29 00:45:20]  *** Contents of shared directory: ***
[2026-04-29 00:45:20] total 468556
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas 262850241 Apr 28 17:39 ATLAS.root_0
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 17:39 start_atlas.sh
[2026-04-29 00:45:20] -rw-r--r--. 2 boincer umatlas    697415 Apr 28 17:39 input.tar.gz
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas 213623130 Apr 29 00:43 HITS.pool.root.1
[2026-04-29 00:45:20] -rw-------. 1 boincer umatlas   2600960 Apr 29 00:45 result.tar.gz
00:45:21 (3172399): run_atlas exited; CPU time 54169.149369
00:45:21 (3172399): called boinc_finish(0)

</stderr_txt>
]]>

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