Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 17:58:34 (6188): vboxwrapper version 26210
2026-04-28 17:58:34 (6188): BOINC client version: 8.2.9
2026-04-28 17:58:35 (6188): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2026-04-28 17:58:35 (6188): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 17:58:35 (6188): Create VM. (boinc_108644725859a3d5, slot#1)
2026-04-28 17:58:36 (6188): Setting Memory Size for VM. (4400MB)
2026-04-28 17:58:36 (6188): Setting CPU Count for VM. (4)
2026-04-28 17:58:37 (6188): Setting Chipset Options for VM.
2026-04-28 17:58:37 (6188): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 17:58:37 (6188): Setting Boot Options for VM.
2026-04-28 17:58:38 (6188): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 17:58:38 (6188): Enabling VM Network Access.
2026-04-28 17:58:39 (6188): Disabling USB Support for VM.
2026-04-28 17:58:39 (6188): Disabling COM Port Support for VM.
2026-04-28 17:58:39 (6188): Disabling LPT Port Support for VM.
2026-04-28 17:58:39 (6188): Disabling Audio Support for VM.
2026-04-28 17:58:40 (6188): Disabling Clipboard Support for VM.
2026-04-28 17:58:40 (6188): Disabling Drag and Drop Support for VM.
2026-04-28 17:58:40 (6188): Adding storage controller(s) to VM.
2026-04-28 17:58:41 (6188): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 17:58:43 (6188): Adding VirtualBox Guest Additions to VM.
2026-04-28 17:58:43 (6188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 17:58:44 (6188): forwarding host port 56776 to guest port 80
2026-04-28 17:58:44 (6188): Enabling remote desktop for VM.
2026-04-28 17:58:44 (6188): Required extension pack not installed, remote desktop not enabled.
2026-04-28 17:58:44 (6188): Enabling shared directory for VM.
2026-04-28 17:58:45 (6188): Starting VM using VBoxManage interface. (boinc_108644725859a3d5, slot#1)
2026-04-28 17:58:56 (6188): Successfully started VM. (PID = '10212')
2026-04-28 17:58:56 (6188): Reporting VM Process ID to BOINC.
2026-04-28 17:58:56 (6188): Guest Log: BIOS: VirtualBox 7.0.18
2026-04-28 17:58:56 (6188): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 17:58:56 (6188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 17:58:56 (6188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 17:58:56 (6188): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 17:58:56 (6188): Detected: Web Application Enabled (http://localhost:56776)
2026-04-28 17:58:56 (6188): Preference change detected
2026-04-28 17:58:56 (6188): Setting CPU throttle for VM. (100%)
2026-04-28 17:58:56 (6188): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 17:58:58 (6188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 17:58:58 (6188): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 17:59:03 (6188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 17:59:03 (6188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 17:59:03 (6188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 17:59:14 (6188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 17:59:14 (6188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 17:59:35 (6188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.000385 main     Log opened 2026-04-28T17:59:32.880744000Z
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.000629 main     OS Product: Linux
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.000867 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.001023 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.001142 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.001145 main     Process ID: 1305
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.001148 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 17:59:35 (6188): Guest Log: 00:00:00.004934 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 17:59:35 (6188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 17:59:35 (6188): Guest Log: [INFO] Mounting shared directory
2026-04-28 17:59:35 (6188): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 17:59:43 (6188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 17:59:43 (6188): Guest Log: [INFO] Detected branch: prod
2026-04-28 17:59:43 (6188): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 17:59:43 (6188): Guest Log: Copying input files
2026-04-28 17:59:45 (6188): Guest Log: 00:00:10.010967 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 463 380 000ns (GuestNow=1 777 413 584 353 818 000 ns GuestLast=1 777 399 172 890 438 000 ns fSetTimeLastLoop=true )
2026-04-28 17:59:47 (6188): Guest Log: Copied input files into RunAtlas.
2026-04-28 17:59:48 (6188): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 17:59:48 (6188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 17:59:48 (6188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 17:59:48 (6188): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 17:59:58 (6188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 17:59:59 (6188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 17:59:59 (6188): Guest Log: 2.6.3.0 1588 0 32184 158982 3 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 18:00:00 (6188): Guest Log: copied the webapp to /var/www
2026-04-28 18:00:01 (6188): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-28 18:00:01 (6188): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-28 18:00:01 (6188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 18:00:01 (6188): Guest Log:  *** Starting ATLAS job. (PandaID=7116907469 taskID=49863733) ***
2026-04-28 19:42:39 (6188): Status Report: Elapsed Time: '6000.604107'
2026-04-28 19:42:39 (6188): Status Report: CPU Time: '19323.968750'
2026-04-28 21:29:20 (6188): Status Report: Elapsed Time: '12001.485382'
2026-04-28 21:29:20 (6188): Status Report: CPU Time: '43525.828125'
2026-04-28 23:16:12 (6188): Status Report: Elapsed Time: '18002.387640'
2026-04-28 23:16:12 (6188): Status Report: CPU Time: '67727.671875'
2026-04-29 01:03:29 (6188): Status Report: Elapsed Time: '24002.492020'
2026-04-29 01:03:29 (6188): Status Report: CPU Time: '92144.609375'
2026-04-29 02:50:18 (6188): Status Report: Elapsed Time: '30002.534426'
2026-04-29 02:50:18 (6188): Status Report: CPU Time: '116520.968750'
2026-04-29 04:38:22 (6188): Status Report: Elapsed Time: '36003.405304'
2026-04-29 04:38:32 (6188): Status Report: CPU Time: '141061.203125'
2026-04-29 06:25:30 (6188): Status Report: Elapsed Time: '42003.878780'
2026-04-29 06:25:30 (6188): Status Report: CPU Time: '165384.093750'
2026-04-29 08:12:58 (6188): Status Report: Elapsed Time: '48004.392679'
2026-04-29 08:12:58 (6188): Status Report: CPU Time: '189198.031250'
2026-04-29 08:17:23 (6188): Guest Log:  *** Job finished ***
2026-04-29 08:17:23 (6188): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:08,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:08,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:14,806 | INFO     | [monitor] cgroup control has ended
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:15,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348119799616)>', '<ExcThread(monitor, started 140347292239616)>']
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:15,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:15,430 | INFO     | [monitor] control thread has ended
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,228 | INFO     | all workflow threads have been joined
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,229 | INFO     | end of generic workflow (traces error code: 0)
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,229 | INFO     | traces error code: 0
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,464 [wrapper] ==== pilot stdout END ====
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,479 [wrapper] ==== wrapper stdout RESUME ====
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,496 [wrapper] pilotpid: 6027
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,511 [wrapper] Pilot exit status: 0
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,588 [wrapper] pandaids: 7116907469
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,690 [wrapper] cleanup supervisor_pilot  8893 6028
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,713 [wrapper] Test setup, not cleaning
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,731 [wrapper] apfmon messages muted
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,749 [wrapper] ==== wrapper stdout END ====
2026-04-29 08:17:23 (6188): Guest Log: 2026-04-29 12:17:20,767 [wrapper] ==== wrapper stderr END ====
2026-04-29 08:17:23 (6188): Guest Log:  *** Error codes and diagnostics ***
2026-04-29 08:17:23 (6188): Guest Log:     "exeErrorCode": 0,
2026-04-29 08:17:23 (6188): Guest Log:     "pilotErrorCode": 0,
2026-04-29 08:17:23 (6188): Guest Log:  *** Listing of results directory ***
2026-04-29 08:17:23 (6188): Guest Log: total 223072
2026-04-29 08:17:23 (6188): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 20:25 pilot3.tar.gz
2026-04-29 08:17:23 (6188): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 20:27 queuedata.json
2026-04-29 08:17:23 (6188): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 20:28 runpilot2-wrapper.sh
2026-04-29 08:17:23 (6188): Guest Log: -rwxr-xr-x. 1 atlas atlas      5841 Apr 28 21:59 init_data.xml
2026-04-29 08:17:23 (6188): Guest Log: -rwxr-xr-x. 1 atlas atlas    697415 Apr 28 21:59 input.tar.gz
2026-04-29 08:17:23 (6188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 21:59 start_atlas.sh
2026-04-29 08:17:23 (6188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 21:59 EVNT.49863730._000189.pool.root.1 -> /data/./ATLAS.root_0
2026-04-29 08:17:23 (6188): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 28 22:00 pandaJob.out
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas   1001138 Apr 28 22:01 agis_schedconf.cvmfs.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas       427 Apr 28 22:02 workernode_map.json
2026-04-29 08:17:23 (6188): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 22:02 pilot3
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas 214126122 Apr 29 12:15 HITS.49863733._004387.pool.root.1
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 29 12:16 memory_monitor_summary.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 29 12:16 agis_ddmendpoints.agis.ALL.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas    653821 Apr 29 12:16 log.49863733._004387.job.log.tgz.1
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas      6395 Apr 29 12:16 heartbeat_new.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas      6286 Apr 29 12:16 heartbeat.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas        95 Apr 29 12:17 pilot_heartbeat.json
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas      4805 Apr 29 12:17 pilotlog.txt
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas   4462695 Apr 29 12:17 log.49863733._004387.job.log.1
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas       357 Apr 29 12:17 output.list
2026-04-29 08:17:23 (6188): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 29 12:17 runtime_log
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas   5130240 Apr 29 12:17 result.tar.gz
2026-04-29 08:17:23 (6188): Guest Log: -rw-r--r--. 1 atlas atlas      8363 Apr 29 12:17 runtime_log.err
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas       656 Apr 29 12:17 1850f2008a9d.diag
2026-04-29 08:17:23 (6188): Guest Log: Looking for outputfile HITS.49863733._004387.pool.root.1
2026-04-29 08:17:23 (6188): Guest Log: HITS file was successfully produced
2026-04-29 08:17:23 (6188): Guest Log: -rw-------. 1 atlas atlas 214126122 Apr 29 12:15 /home/atlas/RunAtlas/HITS.49863733._004387.pool.root.1
2026-04-29 08:17:27 (6188): Guest Log: Successfully finished the ATLAS job!
2026-04-29 08:17:27 (6188): Guest Log: Copying the results back to the shared directory!
2026-04-29 08:17:27 (6188): Guest Log:  *** Contents of shared directory: ***
2026-04-29 08:17:27 (6188): Guest Log: total 468756
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root 260020681 Apr 28 21:58 ATLAS.root_0
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root 214126122 Apr 29 12:17 HITS.pool.root.1
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root      5841 Apr 28 21:58 init_data.xml
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root    697415 Apr 28 21:56 input.tar.gz
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root   5130240 Apr 29 12:17 result.tar.gz
2026-04-29 08:17:27 (6188): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 21:56 start_atlas.sh
2026-04-29 08:17:27 (6188): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-29 08:17:27 (6188): VM Completion File Detected.
2026-04-29 08:17:27 (6188): Powering off VM.
2026-04-29 08:17:28 (6188): Successfully stopped VM.
2026-04-29 08:17:28 (6188): Deregistering VM. (boinc_108644725859a3d5, slot#1)
2026-04-29 08:17:28 (6188): Removing network bandwidth throttle group from VM.
2026-04-29 08:17:28 (6188): Removing VM from VirtualBox.
2026-04-29 08:17:34 (6188): called boinc_finish(0)

</stderr_txt>
]]>

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