Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:28 (5070): wrapper (7.7.26015): starting
19:12:28 (5070): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 19:12:28] Arguments: --nthreads 8
[2026-04-29 19:12:28] Threads: 8
[2026-04-29 19:12:28] Checking for CVMFS
[2026-04-29 19:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 19:12:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 19:12:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 19:12:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 19:12:30] 2.11.2.0 26317 20166 101676 159013 3 53 24193836 25165825 1027 130560 0 6504228 99.901 2436496 3616 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 19:12:30] CVMFS is ok
[2026-04-29 19:12:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 19:12:30] Checking for apptainer binary...
[2026-04-29 19:12:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 19:12:30] Running /usr/bin/apptainer --version
[2026-04-29 19:12:30] apptainer version 1.3.2-1.el7
[2026-04-29 19:12:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 19:13:30] cg-vwn384.simple-grid.lan
[2026-04-29 19:13:30] apptainer works
[2026-04-29 19:13:30] Set ATHENA_PROC_NUMBER=8
[2026-04-29 19:13:30] Set ATHENA_CORE_NUMBER=8
[2026-04-29 19:13:30] Starting ATLAS job with PandaID=7116905511
[2026-04-29 19:13:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 01:11:21]  *** The last 200 lines of the pilot log: ***
[2026-04-30 01:11:21] 2026-04-29 23:10:07,651 | INFO     | total number of processed events: 400 (read)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,653 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7116905511/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,654 | INFO     | extracted standard info from prmon json
[2026-04-30 01:11:21] 2026-04-29 23:10:07,654 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 01:11:21] 2026-04-29 23:10:07,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 01:11:21] 2026-04-29 23:10:07,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 01:11:21] 2026-04-29 23:10:07,671 | INFO     | fitting pss+swap vs Time
[2026-04-30 01:11:21] 2026-04-29 23:10:07,671 | INFO     | sum of square deviations: 12080189290.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,675 | INFO     | sum of deviations: 175337622859.99997
[2026-04-30 01:11:21] 2026-04-29 23:10:07,676 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,676 | INFO     | mean y: 2474421.9292035396
[2026-04-30 01:11:21] 2026-04-29 23:10:07,676 | INFO     | intersect: 2474421.9292035396
[2026-04-30 01:11:21] 2026-04-29 23:10:07,677 | INFO     | chi2: 9.75313266867849
[2026-04-30 01:11:21] 2026-04-29 23:10:07,677 | INFO     | sum of square deviations: 11553509647.5
[2026-04-30 01:11:21] 2026-04-29 23:10:07,688 | INFO     | sum of deviations: 195482247213.5
[2026-04-30 01:11:21] 2026-04-29 23:10:07,688 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,689 | INFO     | mean y: 2480175.739520958
[2026-04-30 01:11:21] 2026-04-29 23:10:07,689 | INFO     | intersect: 2480175.739520958
[2026-04-30 01:11:21] 2026-04-29 23:10:07,689 | INFO     | chi2: 9.047561437554997
[2026-04-30 01:11:21] 2026-04-29 23:10:07,689 | INFO     | current chi2=9.047561437554997 (change=7.234303634455685 %)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,690 | INFO     | right removable region: 333
[2026-04-30 01:11:21] 2026-04-29 23:10:07,690 | INFO     | sum of square deviations: 11553509647.5
[2026-04-30 01:11:21] 2026-04-29 23:10:07,694 | INFO     | sum of deviations: 48358081992.5
[2026-04-30 01:11:21] 2026-04-29 23:10:07,694 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,694 | INFO     | mean y: 2511189.8113772455
[2026-04-30 01:11:21] 2026-04-29 23:10:07,694 | INFO     | intersect: 2511189.8113772455
[2026-04-30 01:11:21] 2026-04-29 23:10:07,695 | INFO     | chi2: 4.2054483849852975
[2026-04-30 01:11:21] 2026-04-29 23:10:07,695 | INFO     | current chi2=4.2054483849852975 (change=56.88105014206559 %)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,696 | INFO     | sum of square deviations: 11042365180.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,699 | INFO     | sum of deviations: -49759597649.000015
[2026-04-30 01:11:21] 2026-04-29 23:10:07,700 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,700 | INFO     | mean y: 2540437.8541033436
[2026-04-30 01:11:21] 2026-04-29 23:10:07,700 | INFO     | intersect: 2540437.8541033436
[2026-04-30 01:11:21] 2026-04-29 23:10:07,701 | INFO     | chi2: 1.0882826145700988
[2026-04-30 01:11:21] 2026-04-29 23:10:07,701 | INFO     | current chi2=1.0882826145700988 (change=74.12207890945488 %)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,701 | INFO     | sum of square deviations: 10546523325.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,705 | INFO     | sum of deviations: -65022562619.49999
[2026-04-30 01:11:21] 2026-04-29 23:10:07,705 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,705 | INFO     | mean y: 2545110.422839506
[2026-04-30 01:11:21] 2026-04-29 23:10:07,705 | INFO     | intersect: 2545110.422839506
[2026-04-30 01:11:21] 2026-04-29 23:10:07,706 | INFO     | chi2: 0.9750120250559375
[2026-04-30 01:11:21] 2026-04-29 23:10:07,706 | INFO     | current chi2=0.9750120250559375 (change=10.408196179712585 %)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,706 | INFO     | left removable region: 15
[2026-04-30 01:11:21] 2026-04-29 23:10:07,707 | INFO     | sum of square deviations: 9971385099.5
[2026-04-30 01:11:21] 2026-04-29 23:10:07,716 | INFO     | sum of deviations: -42145733229.499985
[2026-04-30 01:11:21] 2026-04-29 23:10:07,717 | INFO     | mean x (centered): 0.0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,717 | INFO     | mean y: 2552281.1226415094
[2026-04-30 01:11:21] 2026-04-29 23:10:07,717 | INFO     | intersect: 2552281.1226415094
[2026-04-30 01:11:21] 2026-04-29 23:10:07,718 | INFO     | chi2: 0.18544251030395772
[2026-04-30 01:11:21] 2026-04-29 23:10:07,718 | INFO     | current memory leak: -4.23 B/s (using 318 data points, chi2=0.19)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | ..............................
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . Timing measurements:
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . get job = 0 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . initial setup = 112 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . payload setup = 220 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . stage-in = 0 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,719 | INFO     | . payload execution = 20789 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,720 | INFO     | . stage-out = 3 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,720 | INFO     | . log creation = 1 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,720 | INFO     | ..............................
[2026-04-30 01:11:21] 2026-04-29 23:10:07,854 | INFO     | 
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | job summary report
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | --------------------------------------------------
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | PanDA job id: 7116905511
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | task id: 49863771
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | errors: (none)
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | pilot state: finished 
[2026-04-30 01:11:21] 2026-04-29 23:10:07,855 | INFO     | transexitcode: 0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | exeerrorcode: 0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | exeerrordiag: 
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | exitcode: 0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | exitmsg: OK
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | cpuconsumptiontime: 79580 s
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | nevents: 400
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | neventsw: 0
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | pid: 13498
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | pgrp: 13498
[2026-04-30 01:11:21] 2026-04-29 23:10:07,856 | INFO     | corecount: 8
[2026-04-30 01:11:21] 2026-04-29 23:10:07,857 | INFO     | event service: False
[2026-04-30 01:11:21] 2026-04-29 23:10:07,857 | INFO     | sizes: {0: 2280004, 1: 2280917, 2: 2282491, 13: 2282519, 21014: 2316221, 21015: 2316220, 21020: 2325598}
[2026-04-30 01:11:21] 2026-04-29 23:10:07,857 | INFO     | --------------------------------------------------
[2026-04-30 01:11:21] 2026-04-29 23:10:07,857 | INFO     | 
[2026-04-30 01:11:21] 2026-04-29 23:10:07,857 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-04-30 01:11:21] 2026-04-29 23:10:08,453 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,453 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,453 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 01:11:21] 2026-04-29 23:10:08,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,456 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 01:11:21] 2026-04-29 23:10:08,456 | INFO     | job 7116905511 has completed (purged errors)
[2026-04-30 01:11:21] 2026-04-29 23:10:08,456 | INFO     | overall cleanup function is called
[2026-04-30 01:11:21] 2026-04-29 23:10:08,664 | INFO     | PID=9051 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-30 01:11:21] 2026-04-29 23:10:08,664 | INFO     | .. there are 2 such processes running
[2026-04-30 01:11:21] 2026-04-29 23:10:09,465 | INFO     | --- collectZombieJob: --- 10, [13498]
[2026-04-30 01:11:21] 2026-04-29 23:10:09,465 | INFO     | zombie collector waiting for pid 13498
[2026-04-30 01:11:21] 2026-04-29 23:10:09,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 01:11:21] 2026-04-29 23:10:09,466 | INFO     | collected zombie processes
[2026-04-30 01:11:21] 2026-04-29 23:10:09,466 | INFO     | will attempt to kill all subprocesses of pid=13498
[2026-04-30 01:11:21] 2026-04-29 23:10:09,529 | INFO     | process IDs to be killed: [13498] (in reverse order)
[2026-04-30 01:11:21] 2026-04-29 23:10:10,540 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 01:11:21] 2026-04-29 23:10:10,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 01:11:21] 2026-04-29 23:10:10,542 | INFO     | did not find any defunct processes belonging to 13498
[2026-04-30 01:11:21] 2026-04-29 23:10:10,544 | INFO     | did not find any defunct processes belonging to 13498
[2026-04-30 01:11:21] 2026-04-29 23:10:10,544 | INFO     | Ready for new job
[2026-04-30 01:11:21] 2026-04-29 23:10:10,546 | INFO     | ***************************************
[2026-04-30 01:11:21] 2026-04-29 23:10:10,546 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 01:11:21] 2026-04-29 23:10:10,546 | INFO     | ***************************************
[2026-04-30 01:11:21] 2026-04-29 23:10:10,546 | INFO     | 
[2026-04-30 01:11:21] 2026-04-29 23:10:10,547 | INFO     | pilot is running in a VM
[2026-04-30 01:11:21] 2026-04-29 23:10:10,547 | INFO     | architecture information:
[2026-04-30 01:11:21] 2026-04-29 23:10:10,554 | INFO     | executing command: cat /etc/os-release
[2026-04-30 01:11:21] 2026-04-29 23:10:10,907 | INFO     | cat /etc/os-release:
[2026-04-30 01:11:21] NAME="CentOS Linux"
[2026-04-30 01:11:21] VERSION="7 (Core)"
[2026-04-30 01:11:21] ID="centos"
[2026-04-30 01:11:21] ID_LIKE="rhel fedora"
[2026-04-30 01:11:21] VERSION_ID="7"
[2026-04-30 01:11:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 01:11:21] ANSI_COLOR="0;31"
[2026-04-30 01:11:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 01:11:21] HOME_URL="https://www.centos.org/"
[2026-04-30 01:11:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 01:11:21] 
[2026-04-30 01:11:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 01:11:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 01:11:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 01:11:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 01:11:21] 
[2026-04-30 01:11:21] 2026-04-29 23:10:10,908 | INFO     | ***************************************
[2026-04-30 01:11:21] 2026-04-29 23:10:11,411 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-04-30 01:11:21] 2026-04-29 23:10:11,692 | INFO     | sufficient remaining disk space (495387148288 B)
[2026-04-30 01:11:21] 2026-04-29 23:10:11,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 01:11:21] 2026-04-29 23:10:11,692 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 01:11:21] 2026-04-29 23:10:11,692 | INFO     | update_server=False
[2026-04-30 01:11:21] 2026-04-29 23:10:11,693 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 01:11:21] 2026-04-29 23:10:11,756 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 01:11:21] 2026-04-29 23:10:11,756 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 01:11:21] 2026-04-29 23:10:11,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 01:11:21] 2026-04-29 23:10:11,757 | INFO     | will abort loop
[2026-04-30 01:11:21] 2026-04-29 23:10:12,307 | INFO     | all job control threads have been joined
[2026-04-30 01:11:21] 2026-04-29 23:10:12,489 | INFO     | all data control threads have been joined
[2026-04-30 01:11:21] 2026-04-29 23:10:12,698 | INFO     | [job] retrieve thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:12,762 | INFO     | [job] job monitor thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:12,817 | INFO     | all payload control threads have been joined
[2026-04-30 01:11:21] 2026-04-29 23:10:12,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 01:11:21] 2026-04-29 23:10:12,926 | INFO     | [payload] validate_post thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 01:11:21] 2026-04-29 23:10:13,063 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,077 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,288 | INFO     | [job] validate thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,307 | INFO     | [data] copytool_in thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,313 | INFO     | [job] control thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,495 | INFO     | [data] control thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 01:11:21] 2026-04-29 23:10:13,827 | INFO     | [payload] control thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:13,882 | INFO     | [job] queue monitor thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:14,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:14,060 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:14,061 | INFO     | [payload] failed_post thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:15,017 | INFO     | [data] copytool_out thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:17,667 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 01:11:21] 2026-04-29 23:10:40,810 | INFO     | PID=9051 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-30 01:11:21] 2026-04-29 23:10:40,810 | INFO     | .. there are 2 such processes running
[2026-04-30 01:11:21] 2026-04-29 23:10:40,811 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 01:11:21] 2026-04-29 23:10:40,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 01:11:21] 2026-04-29 23:10:40,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 01:11:21] 2026-04-29 23:11:09,418 | INFO     | [monitor] cgroup control has ended
[2026-04-30 01:11:21] 2026-04-29 23:11:10,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582325995328)>', '<ExcThread(monitor, started 140581896435456)>']
[2026-04-30 01:11:21] 2026-04-29 23:11:10,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 01:11:21] 2026-04-29 23:11:10,991 | INFO     | [monitor] control thread has ended
[2026-04-30 01:11:21] 2026-04-29 23:11:15,851 | INFO     | all workflow threads have been joined
[2026-04-30 01:11:21] 2026-04-29 23:11:15,851 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 01:11:21] 2026-04-29 23:11:15,852 | INFO     | traces error code: 0
[2026-04-30 01:11:21] 2026-04-29 23:11:15,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 01:11:21] 2026-04-29 23:11:16,290 [wrapper] ==== pilot stdout END ====
[2026-04-30 01:11:21] 2026-04-29 23:11:16,391 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 01:11:21] 2026-04-29 23:11:16,502 [wrapper] pilotpid: 9051
[2026-04-30 01:11:21] 2026-04-29 23:11:16,611 [wrapper] Pilot exit status: 0
[2026-04-30 01:11:21] 2026-04-29 23:11:16,718 [wrapper] pandaids: 7116905511
[2026-04-30 01:11:21] 2026-04-29 23:11:17,833 [wrapper] cleanup supervisor_pilot 21479 9052
[2026-04-30 01:11:21] 2026-04-29 23:11:17,950 [wrapper] Test setup, not cleaning
[2026-04-30 01:11:21] 2026-04-29 23:11:18,066 [wrapper] apfmon messages muted
[2026-04-30 01:11:21] 2026-04-29 23:11:18,179 [wrapper] ==== wrapper stdout END ====
[2026-04-30 01:11:21] 2026-04-29 23:11:18,282 [wrapper] ==== wrapper stderr END ====
[2026-04-30 01:11:21]  *** Error codes and diagnostics ***
[2026-04-30 01:11:21]     "exeErrorCode": 0,
[2026-04-30 01:11:21]     "pilotErrorCode": 0,
[2026-04-30 01:11:21]  *** Listing of results directory ***
[2026-04-30 01:11:21] total 485504
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc    683926 Apr 28 21:44 pilot3.tar.gz
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc      5631 Apr 28 21:50 queuedata.json
[2026-04-30 01:11:21] -rwx------. 1 boinc boinc     36322 Apr 28 21:50 runpilot2-wrapper.sh
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc       100 Apr 29 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 01:11:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 19:12 run_atlas
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc       105 Apr 29 19:12 job.xml
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc      6308 Apr 29 19:12 init_data.xml
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc 266152179 Apr 29 19:12 EVNT.49863768._000043.pool.root.1
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc     15667 Apr 29 19:12 start_atlas.sh
[2026-04-30 01:11:21] drwxrwx--x. 2 boinc boinc        68 Apr 29 19:12 shared
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc    697414 Apr 29 19:12 input.tar.gz
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc         0 Apr 29 19:12 boinc_lockfile
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc      2574 Apr 29 19:13 pandaJob.out
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc       415 Apr 29 19:19 workernode_map.json
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc   1001909 Apr 29 19:19 agis_schedconf.cvmfs.json
[2026-04-30 01:11:21] drwx------. 5 boinc boinc      4096 Apr 29 19:19 pilot3
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc 222081753 Apr 30 01:08 HITS.49863771._001072.pool.root.1
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc       488 Apr 30 01:08 boinc_task_state.xml
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc      1024 Apr 30 01:09 memory_monitor_summary.json
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc        95 Apr 30 01:09 pilot_heartbeat.json
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc   1512704 Apr 30 01:10 agis_ddmendpoints.agis.ALL.json
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc    462726 Apr 30 01:10 log.49863771._001072.job.log.tgz.1
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc      6335 Apr 30 01:10 heartbeat_new.json
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc      6226 Apr 30 01:10 heartbeat.json
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc      8192 Apr 30 01:11 boinc_mmap_file
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc        28 Apr 30 01:11 wrapper_checkpoint.txt
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc      5069 Apr 30 01:11 pilotlog.txt
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc   1933208 Apr 30 01:11 log.49863771._001072.job.log.1
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc       357 Apr 30 01:11 output.list
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc       410 Apr 30 01:11 runtime_log
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc   2416640 Apr 30 01:11 result.tar.gz
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc      8455 Apr 30 01:11 runtime_log.err
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc       656 Apr 30 01:11 0f8f42383e2c.diag
[2026-04-30 01:11:21] -rw-r--r--. 1 boinc boinc     20732 Apr 30 01:11 stderr.txt
[2026-04-30 01:11:21] HITS file was successfully produced:
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc 222081753 Apr 30 01:08 shared/HITS.pool.root.1
[2026-04-30 01:11:21]  *** Contents of shared directory: ***
[2026-04-30 01:11:21] total 479856
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc 266152179 Apr 29 19:12 ATLAS.root_0
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc     15667 Apr 29 19:12 start_atlas.sh
[2026-04-30 01:11:21] -rw-r--r--. 2 boinc boinc    697414 Apr 29 19:12 input.tar.gz
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc 222081753 Apr 30 01:08 HITS.pool.root.1
[2026-04-30 01:11:21] -rw-------. 1 boinc boinc   2416640 Apr 30 01:11 result.tar.gz
01:11:22 (5070): run_atlas exited; CPU time 79771.367847
01:11:22 (5070): called boinc_finish(0)

</stderr_txt>
]]>

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