Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:46 (1829): wrapper (7.7.26015): starting
09:41:46 (1829): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 09:41:46] Arguments: --nthreads 8
[2026-04-29 09:41:46] Threads: 8
[2026-04-29 09:41:46] Checking for CVMFS
[2026-04-29 09:41:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 09:41:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 09:41:50] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 09:41:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 09:41:51] 2.11.2.0 31615 19597 99212 158998 3 53 19286228 25165824 96 130560 0 5814021 99.932 4700204 7756 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 09:41:51] CVMFS is ok
[2026-04-29 09:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 09:41:51] Checking for apptainer binary...
[2026-04-29 09:41:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 09:41:51] Running /usr/bin/apptainer --version
[2026-04-29 09:41:51] apptainer version 1.3.2-1.el7
[2026-04-29 09:41:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 09:41:59] cg-vwn423.simple-grid.lan
[2026-04-29 09:41:59] apptainer works
[2026-04-29 09:41:59] Set ATHENA_PROC_NUMBER=8
[2026-04-29 09:41:59] Set ATHENA_CORE_NUMBER=8
[2026-04-29 09:42:00] Starting ATLAS job with PandaID=7116798086
[2026-04-29 09:42:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 15:11:31]  *** The last 200 lines of the pilot log: ***
[2026-04-29 15:11:31] 2026-04-29 13:10:52,779 | INFO     | log transfer has been attempted: DONE
[2026-04-29 15:11:31] 2026-04-29 13:10:52,779 | INFO     | job 7116798086 has finished - writing final server update
[2026-04-29 15:11:31] 2026-04-29 13:10:52,780 | INFO     | total number of processed events: 400 (read)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,785 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7116798086/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,786 | INFO     | extracted standard info from prmon json
[2026-04-29 15:11:31] 2026-04-29 13:10:52,786 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 15:11:31] 2026-04-29 13:10:52,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 15:11:31] 2026-04-29 13:10:52,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 15:11:31] 2026-04-29 13:10:52,793 | INFO     | fitting pss+swap vs Time
[2026-04-29 15:11:31] 2026-04-29 13:10:52,794 | INFO     | sum of square deviations: 9417545878.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,797 | INFO     | sum of deviations: 170352962506.5
[2026-04-29 15:11:31] 2026-04-29 13:10:52,797 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,798 | INFO     | mean y: 2461831.9775641025
[2026-04-29 15:11:31] 2026-04-29 13:10:52,798 | INFO     | intersect: 2461831.9775641025
[2026-04-29 15:11:31] 2026-04-29 13:10:52,798 | INFO     | chi2: 7.912353529010042
[2026-04-29 15:11:31] 2026-04-29 13:10:52,799 | INFO     | sum of square deviations: 8971993338.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,802 | INFO     | sum of deviations: 188009448771.00006
[2026-04-29 15:11:31] 2026-04-29 13:10:52,802 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,803 | INFO     | mean y: 2467782.5700325733
[2026-04-29 15:11:31] 2026-04-29 13:10:52,803 | INFO     | intersect: 2467782.5700325733
[2026-04-29 15:11:31] 2026-04-29 13:10:52,803 | INFO     | chi2: 7.1911254594228895
[2026-04-29 15:11:31] 2026-04-29 13:10:52,803 | INFO     | current chi2=7.1911254594228895 (change=9.11521542791061 %)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,804 | INFO     | right removable region: 306
[2026-04-29 15:11:31] 2026-04-29 13:10:52,804 | INFO     | sum of square deviations: 8971993338.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,808 | INFO     | sum of deviations: 64056791679.00003
[2026-04-29 15:11:31] 2026-04-29 13:10:52,808 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,808 | INFO     | mean y: 2498190.325732899
[2026-04-29 15:11:31] 2026-04-29 13:10:52,808 | INFO     | intersect: 2498190.325732899
[2026-04-29 15:11:31] 2026-04-29 13:10:52,809 | INFO     | chi2: 3.3465130501791007
[2026-04-29 15:11:31] 2026-04-29 13:10:52,809 | INFO     | current chi2=3.3465130501791007 (change=57.705213273024704 %)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,809 | INFO     | sum of square deviations: 8540720135.5
[2026-04-29 15:11:31] 2026-04-29 13:10:52,827 | INFO     | sum of deviations: -15153097504.499996
[2026-04-29 15:11:31] 2026-04-29 13:10:52,827 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,827 | INFO     | mean y: 2526159.804635762
[2026-04-29 15:11:31] 2026-04-29 13:10:52,827 | INFO     | intersect: 2526159.804635762
[2026-04-29 15:11:31] 2026-04-29 13:10:52,828 | INFO     | chi2: 0.9256899593163525
[2026-04-29 15:11:31] 2026-04-29 13:10:52,828 | INFO     | current chi2=0.9256899593163525 (change=72.33867176263333 %)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,829 | INFO     | sum of square deviations: 8123493708.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,832 | INFO     | sum of deviations: -23911743067.999996
[2026-04-29 15:11:31] 2026-04-29 13:10:52,832 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,832 | INFO     | mean y: 2529323.4882154884
[2026-04-29 15:11:31] 2026-04-29 13:10:52,832 | INFO     | intersect: 2529323.4882154884
[2026-04-29 15:11:31] 2026-04-29 13:10:52,833 | INFO     | chi2: 0.8477582805540208
[2026-04-29 15:11:31] 2026-04-29 13:10:52,833 | INFO     | current chi2=0.8477582805540208 (change=8.418766778013486 %)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,833 | INFO     | left removable region: 15
[2026-04-29 15:11:31] 2026-04-29 13:10:52,833 | INFO     | sum of square deviations: 7641036290.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,836 | INFO     | sum of deviations: -4070648218.0000005
[2026-04-29 15:11:31] 2026-04-29 13:10:52,837 | INFO     | mean x (centered): 0.0
[2026-04-29 15:11:31] 2026-04-29 13:10:52,837 | INFO     | mean y: 2536721.3642611685
[2026-04-29 15:11:31] 2026-04-29 13:10:52,837 | INFO     | intersect: 2536721.3642611685
[2026-04-29 15:11:31] 2026-04-29 13:10:52,837 | INFO     | chi2: 0.06151792698812896
[2026-04-29 15:11:31] 2026-04-29 13:10:52,838 | INFO     | current memory leak: -0.53 B/s (using 291 data points, chi2=0.06)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,838 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | ..............................
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . Timing measurements:
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . get job = 0 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . initial setup = 122 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . payload setup = 190 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . stage-in = 0 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . payload execution = 19121 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,841 | INFO     | . stage-out = 3 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,842 | INFO     | . log creation = 1 s
[2026-04-29 15:11:31] 2026-04-29 13:10:52,842 | INFO     | ..............................
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | 
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | job summary report
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | --------------------------------------------------
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | PanDA job id: 7116798086
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | task id: 49863733
[2026-04-29 15:11:31] 2026-04-29 13:10:53,148 | INFO     | errors: (none)
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | pilot state: finished 
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | transexitcode: 0
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | exeerrorcode: 0
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | exeerrordiag: 
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | exitcode: 0
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | exitmsg: OK
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | cpuconsumptiontime: 73110 s
[2026-04-29 15:11:31] 2026-04-29 13:10:53,149 | INFO     | nevents: 400
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | neventsw: 0
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | pid: 10255
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | pgrp: 10255
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | corecount: 8
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | event service: False
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | sizes: {0: 2280714, 1: 2281115, 2: 2282543, 12: 2282571, 19316: 2315729, 19317: 2315728, 19321: 2324910, 19324: 2325160}
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | --------------------------------------------------
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | 
[2026-04-29 15:11:31] 2026-04-29 13:10:53,150 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-29 15:11:31] 2026-04-29 13:10:53,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 15:11:31] 2026-04-29 13:10:53,781 | INFO     | job 7116798086 has completed (purged errors)
[2026-04-29 15:11:31] 2026-04-29 13:10:53,781 | INFO     | overall cleanup function is called
[2026-04-29 15:11:31] 2026-04-29 13:10:54,795 | INFO     | --- collectZombieJob: --- 10, [10255]
[2026-04-29 15:11:31] 2026-04-29 13:10:54,795 | INFO     | zombie collector waiting for pid 10255
[2026-04-29 15:11:31] 2026-04-29 13:10:54,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 15:11:31] 2026-04-29 13:10:54,795 | INFO     | collected zombie processes
[2026-04-29 15:11:31] 2026-04-29 13:10:54,795 | INFO     | will attempt to kill all subprocesses of pid=10255
[2026-04-29 15:11:31] 2026-04-29 13:10:54,865 | INFO     | process IDs to be killed: [10255] (in reverse order)
[2026-04-29 15:11:31] 2026-04-29 13:10:55,844 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 15:11:31] 2026-04-29 13:10:55,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 15:11:31] 2026-04-29 13:10:55,847 | INFO     | did not find any defunct processes belonging to 10255
[2026-04-29 15:11:31] 2026-04-29 13:10:55,849 | INFO     | did not find any defunct processes belonging to 10255
[2026-04-29 15:11:31] 2026-04-29 13:10:55,849 | INFO     | Ready for new job
[2026-04-29 15:11:31] 2026-04-29 13:10:55,851 | INFO     | ***************************************
[2026-04-29 15:11:31] 2026-04-29 13:10:55,851 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 15:11:31] 2026-04-29 13:10:55,851 | INFO     | ***************************************
[2026-04-29 15:11:31] 2026-04-29 13:10:55,851 | INFO     | 
[2026-04-29 15:11:31] 2026-04-29 13:10:55,852 | INFO     | pilot is running in a VM
[2026-04-29 15:11:31] 2026-04-29 13:10:55,852 | INFO     | architecture information:
[2026-04-29 15:11:31] 2026-04-29 13:10:55,861 | INFO     | executing command: cat /etc/os-release
[2026-04-29 15:11:31] 2026-04-29 13:10:56,269 | INFO     | cat /etc/os-release:
[2026-04-29 15:11:31] NAME="CentOS Linux"
[2026-04-29 15:11:31] VERSION="7 (Core)"
[2026-04-29 15:11:31] ID="centos"
[2026-04-29 15:11:31] ID_LIKE="rhel fedora"
[2026-04-29 15:11:31] VERSION_ID="7"
[2026-04-29 15:11:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 15:11:31] ANSI_COLOR="0;31"
[2026-04-29 15:11:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 15:11:31] HOME_URL="https://www.centos.org/"
[2026-04-29 15:11:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 15:11:31] 
[2026-04-29 15:11:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 15:11:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 15:11:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 15:11:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 15:11:31] 
[2026-04-29 15:11:31] 2026-04-29 13:10:56,270 | INFO     | ***************************************
[2026-04-29 15:11:31] 2026-04-29 13:10:56,773 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-29 15:11:31] 2026-04-29 13:10:57,111 | INFO     | sufficient remaining disk space (493737738240 B)
[2026-04-29 15:11:31] 2026-04-29 13:10:57,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 15:11:31] 2026-04-29 13:10:57,112 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 15:11:31] 2026-04-29 13:10:57,112 | INFO     | update_server=False
[2026-04-29 15:11:31] 2026-04-29 13:10:57,112 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 15:11:31] 2026-04-29 13:10:57,239 | INFO     | all payload control threads have been joined
[2026-04-29 15:11:31] 2026-04-29 13:10:57,262 | INFO     | all data control threads have been joined
[2026-04-29 15:11:31] 2026-04-29 13:10:57,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-29 15:11:31] 2026-04-29 13:10:57,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-29 15:11:31] 2026-04-29 13:10:57,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 15:11:31] 2026-04-29 13:10:57,432 | INFO     | will abort loop
[2026-04-29 15:11:31] 2026-04-29 13:10:57,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 15:11:31] 2026-04-29 13:10:58,052 | INFO     | all job control threads have been joined
[2026-04-29 15:11:31] 2026-04-29 13:10:58,121 | INFO     | [job] retrieve thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 15:11:31] 2026-04-29 13:10:58,227 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,245 | INFO     | [payload] control thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,268 | INFO     | [data] control thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,380 | INFO     | [data] copytool_in thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,438 | INFO     | [job] job monitor thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 15:11:31] 2026-04-29 13:10:58,759 | INFO     | [payload] failed_post thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,784 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:58,804 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,058 | INFO     | [job] control thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,102 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,170 | INFO     | [job] queue monitor thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,446 | INFO     | [job] validate thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,664 | INFO     | [data] copytool_out thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:10:59,706 | INFO     | [payload] validate_post thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:11:02,577 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 15:11:31] 2026-04-29 13:11:08,835 | INFO     | [monitor] cgroup control has ended
[2026-04-29 15:11:31] 2026-04-29 13:11:10,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087764211520)>', '<ExcThread(monitor, started 140087195068160)>']
[2026-04-29 15:11:31] 2026-04-29 13:11:15,473 | INFO     | all workflow threads have been joined
[2026-04-29 15:11:31] 2026-04-29 13:11:15,473 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 15:11:31] 2026-04-29 13:11:15,473 | INFO     | traces error code: 0
[2026-04-29 15:11:31] 2026-04-29 13:11:15,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 15:11:31] 2026-04-29 13:11:26,176 | INFO     | PID=5804 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-29 15:11:31] 2026-04-29 13:11:26,177 | INFO     | .. there are 2 such processes running
[2026-04-29 15:11:31] 2026-04-29 13:11:26,183 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 15:11:31] 2026-04-29 13:11:26,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 15:11:31] 2026-04-29 13:11:26,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 15:11:31] 2026-04-29 13:11:26,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 15:11:31] 2026-04-29 13:11:26,183 | INFO     | [monitor] control thread has ended
[2026-04-29 15:11:31] 2026-04-29 13:11:26,632 [wrapper] ==== pilot stdout END ====
[2026-04-29 15:11:31] 2026-04-29 13:11:26,724 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 15:11:31] 2026-04-29 13:11:26,815 [wrapper] pilotpid: 5804
[2026-04-29 15:11:31] 2026-04-29 13:11:26,910 [wrapper] Pilot exit status: 0
[2026-04-29 15:11:31] 2026-04-29 13:11:27,435 [wrapper] pandaids: 7116798086
[2026-04-29 15:11:31] 2026-04-29 13:11:28,392 [wrapper] cleanup supervisor_pilot 18029 5805
[2026-04-29 15:11:31] 2026-04-29 13:11:28,490 [wrapper] Test setup, not cleaning
[2026-04-29 15:11:31] 2026-04-29 13:11:28,604 [wrapper] apfmon messages muted
[2026-04-29 15:11:31] 2026-04-29 13:11:28,710 [wrapper] ==== wrapper stdout END ====
[2026-04-29 15:11:31] 2026-04-29 13:11:28,842 [wrapper] ==== wrapper stderr END ====
[2026-04-29 15:11:31]  *** Error codes and diagnostics ***
[2026-04-29 15:11:31]     "exeErrorCode": 0,
[2026-04-29 15:11:31]     "pilotErrorCode": 0,
[2026-04-29 15:11:31]  *** Listing of results directory ***
[2026-04-29 15:11:31] total 474424
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc    683926 Apr 28 20:25 pilot3.tar.gz
[2026-04-29 15:11:31] -rwx------. 1 boinc boinc     36322 Apr 28 20:50 runpilot2-wrapper.sh
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc      5631 Apr 28 20:50 queuedata.json
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc       100 Apr 29 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 15:11:31] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 09:41 run_atlas
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc       105 Apr 29 09:41 job.xml
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc      6307 Apr 29 09:41 init_data.xml
[2026-04-29 15:11:31] -rw-r--r--. 2 boinc boinc 260764136 Apr 29 09:41 EVNT.49863730._000162.pool.root.1
[2026-04-29 15:11:31] -rw-r--r--. 2 boinc boinc     15667 Apr 29 09:41 start_atlas.sh
[2026-04-29 15:11:31] drwxrwx--x. 2 boinc boinc        68 Apr 29 09:41 shared
[2026-04-29 15:11:31] -rw-r--r--. 2 boinc boinc    697410 Apr 29 09:41 input.tar.gz
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc         0 Apr 29 09:41 boinc_lockfile
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc      2576 Apr 29 09:41 pandaJob.out
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc       415 Apr 29 09:48 workernode_map.json
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc   1001050 Apr 29 09:48 agis_schedconf.cvmfs.json
[2026-04-29 15:11:31] drwx------. 5 boinc boinc      4096 Apr 29 09:48 pilot3
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc 216428541 Apr 29 15:09 HITS.49863733._003622.pool.root.1
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc       488 Apr 29 15:09 boinc_task_state.xml
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc      1015 Apr 29 15:10 memory_monitor_summary.json
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc   1512704 Apr 29 15:10 agis_ddmendpoints.agis.ALL.json
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc    442763 Apr 29 15:10 log.49863733._003622.job.log.tgz.1
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc      6334 Apr 29 15:10 heartbeat_new.json
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc      6225 Apr 29 15:10 heartbeat.json
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc        28 Apr 29 15:11 wrapper_checkpoint.txt
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc      8192 Apr 29 15:11 boinc_mmap_file
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc        95 Apr 29 15:11 pilot_heartbeat.json
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc       819 Apr 29 15:11 pilotlog.txt
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc   1799534 Apr 29 15:11 log.49863733._003622.job.log.1
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc       357 Apr 29 15:11 output.list
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc       410 Apr 29 15:11 runtime_log
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc   2263040 Apr 29 15:11 result.tar.gz
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc      8439 Apr 29 15:11 runtime_log.err
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc       655 Apr 29 15:11 0187719f4eac.diag
[2026-04-29 15:11:31] -rw-r--r--. 1 boinc boinc     20577 Apr 29 15:11 stderr.txt
[2026-04-29 15:11:31] HITS file was successfully produced:
[2026-04-29 15:11:31] -rw-------. 1 boinc boinc 216428541 Apr 29 15:09 shared/HITS.pool.root.1
[2026-04-29 15:11:31]  *** Contents of shared directory: ***
[2026-04-29 15:11:32] total 468924
[2026-04-29 15:11:32] -rw-r--r--. 2 boinc boinc 260764136 Apr 29 09:41 ATLAS.root_0
[2026-04-29 15:11:32] -rw-r--r--. 2 boinc boinc     15667 Apr 29 09:41 start_atlas.sh
[2026-04-29 15:11:32] -rw-r--r--. 2 boinc boinc    697410 Apr 29 09:41 input.tar.gz
[2026-04-29 15:11:32] -rw-------. 1 boinc boinc 216428541 Apr 29 15:09 HITS.pool.root.1
[2026-04-29 15:11:32] -rw-------. 1 boinc boinc   2263040 Apr 29 15:11 result.tar.gz
15:11:33 (1829): run_atlas exited; CPU time 73296.404632
15:11:33 (1829): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN