Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 15:26:56 (20212): vboxwrapper version 26210
2026-04-28 15:26:56 (20212): BOINC client version: 8.2.11
2026-04-28 15:26:56 (20212): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-28 15:26:56 (20212): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 15:26:57 (20212): Create VM. (boinc_c14db3c66e724d71, slot#16)
2026-04-28 15:26:58 (20212): Setting Memory Size for VM. (4400MB)
2026-04-28 15:26:58 (20212): Setting CPU Count for VM. (4)
2026-04-28 15:26:58 (20212): Setting Chipset Options for VM.
2026-04-28 15:26:59 (20212): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 15:26:59 (20212): Setting Boot Options for VM.
2026-04-28 15:27:00 (20212): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 15:27:00 (20212): Enabling VM Network Access.
2026-04-28 15:27:00 (20212): Disabling USB Support for VM.
2026-04-28 15:27:01 (20212): Disabling COM Port Support for VM.
2026-04-28 15:27:01 (20212): Disabling LPT Port Support for VM.
2026-04-28 15:27:01 (20212): Disabling Audio Support for VM.
2026-04-28 15:27:02 (20212): Disabling Clipboard Support for VM.
2026-04-28 15:27:02 (20212): Disabling Drag and Drop Support for VM.
2026-04-28 15:27:02 (20212): Adding storage controller(s) to VM.
2026-04-28 15:27:03 (20212): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 15:27:04 (20212): Adding VirtualBox Guest Additions to VM.
2026-04-28 15:27:04 (20212): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 15:27:04 (20212): forwarding host port 60943 to guest port 80
2026-04-28 15:27:05 (20212): Enabling remote desktop for VM.
2026-04-28 15:27:05 (20212): Required extension pack not installed, remote desktop not enabled.
2026-04-28 15:27:05 (20212): Enabling shared directory for VM.
2026-04-28 15:27:06 (20212): Starting VM using VBoxManage interface. (boinc_c14db3c66e724d71, slot#16)
2026-04-28 15:27:14 (20212): Successfully started VM. (PID = '15940')
2026-04-28 15:27:14 (20212): Reporting VM Process ID to BOINC.
2026-04-28 15:27:14 (20212): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-28 15:27:14 (20212): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 15:27:14 (20212): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 15:27:14 (20212): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 15:27:14 (20212): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 15:27:14 (20212): Detected: Web Application Enabled (http://localhost:60943)
2026-04-28 15:27:14 (20212): Preference change detected
2026-04-28 15:27:14 (20212): Setting CPU throttle for VM. (100%)
2026-04-28 15:27:14 (20212): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 15:27:16 (20212): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 15:27:16 (20212): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 15:27:21 (20212): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 15:27:21 (20212): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 15:27:21 (20212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 15:27:34 (20212): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 15:27:34 (20212): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 15:27:51 (20212): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000440 main     Log opened 2026-04-28T15:27:48.957220000Z
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000820 main     OS Product: Linux
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000920 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000970 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000997 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000997 main     Process ID: 1310
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.000998 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 15:27:51 (20212): Guest Log: 00:00:00.005146 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 15:27:52 (20212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 15:27:52 (20212): Guest Log: [INFO] Mounting shared directory
2026-04-28 15:27:52 (20212): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 15:28:01 (20212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 15:28:01 (20212): Guest Log: [INFO] Detected branch: prod
2026-04-28 15:28:01 (20212): Guest Log: 00:00:10.014413 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 268 550 000ns (GuestNow=1 777 404 481 237 810 000 ns GuestLast=1 777 390 068 969 260 000 ns fSetTimeLastLoop=true )
2026-04-28 15:28:02 (20212): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 15:28:02 (20212): Guest Log: Copying input files
2026-04-28 15:28:35 (20212): Guest Log: Copied input files into RunAtlas.
2026-04-28 15:28:35 (20212): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 15:28:35 (20212): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 15:28:35 (20212): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 15:28:35 (20212): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 15:28:44 (20212): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 15:28:45 (20212): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 15:28:45 (20212): Guest Log: 2.6.3.0 1592 0 32176 158978 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 15:28:50 (20212): Guest Log: copied the webapp to /var/www
2026-04-28 15:28:50 (20212): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-28 15:28:50 (20212): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-28 15:28:51 (20212): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 15:28:51 (20212): Guest Log:  *** Starting ATLAS job. (PandaID=7116551703 taskID=49863714) ***
2026-04-28 17:07:14 (20212): Status Report: Elapsed Time: '6000.000000'
2026-04-28 17:07:14 (20212): Status Report: CPU Time: '21044.328125'
2026-04-28 18:47:15 (20212): Status Report: Elapsed Time: '12000.000000'
2026-04-28 18:47:15 (20212): Status Report: CPU Time: '44381.093750'
2026-04-28 20:13:26 (20212): Guest Log:  *** Job finished ***
2026-04-28 20:13:26 (20212): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:06,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:06,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:10,805 | INFO     | [monitor] cgroup control has ended
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:10,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601407080256)>', '<ExcThread(monitor, started 140600829527808)>']
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:11,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:11,344 | INFO     | [monitor] control thread has ended
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:15,862 | INFO     | all workflow threads have been joined
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:15,862 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:15,863 | INFO     | traces error code: 0
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:15,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:16,368 [wrapper] ==== pilot stdout END ====
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:16,379 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:16,395 [wrapper] pilotpid: 6030
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:16,411 [wrapper] Pilot exit status: 0
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,117 [wrapper] pandaids: 7116551703
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,187 [wrapper] cleanup supervisor_pilot 29506 6031
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,201 [wrapper] Test setup, not cleaning
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,212 [wrapper] apfmon messages muted
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,224 [wrapper] ==== wrapper stdout END ====
2026-04-28 20:13:26 (20212): Guest Log: 2026-04-29 00:13:17,237 [wrapper] ==== wrapper stderr END ====
2026-04-28 20:13:26 (20212): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 20:13:26 (20212): Guest Log:     "exeErrorCode": 0,
2026-04-28 20:13:26 (20212): Guest Log:     "pilotErrorCode": 0,
2026-04-28 20:13:26 (20212): Guest Log:  *** Listing of results directory ***
2026-04-28 20:13:26 (20212): Guest Log: total 217184
2026-04-28 20:13:26 (20212): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 15:09 runpilot2-wrapper.sh
2026-04-28 20:13:26 (20212): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 15:41 queuedata.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 15:41 pilot3.tar.gz
2026-04-28 20:13:26 (20212): Guest Log: -rwxr-xr-x. 1 atlas atlas      8404 Apr 28 19:28 init_data.xml
2026-04-28 20:13:26 (20212): Guest Log: -rwxr-xr-x. 1 atlas atlas    697417 Apr 28 19:28 input.tar.gz
2026-04-28 20:13:26 (20212): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 19:28 start_atlas.sh
2026-04-28 20:13:26 (20212): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 19:28 EVNT.49863712._000199.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 20:13:26 (20212): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Apr 28 19:28 pandaJob.out
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas   1001831 Apr 28 19:30 agis_schedconf.cvmfs.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas       421 Apr 28 19:30 workernode_map.json
2026-04-28 20:13:26 (20212): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 19:30 pilot3
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas 214530156 Apr 29 00:11 HITS.49863714._004947.pool.root.1
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 29 00:12 memory_monitor_summary.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 29 00:12 agis_ddmendpoints.agis.ALL.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas    364681 Apr 29 00:12 log.49863714._004947.job.log.tgz.1
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas      6349 Apr 29 00:12 heartbeat_new.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas      6240 Apr 29 00:12 heartbeat.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas        95 Apr 29 00:12 pilot_heartbeat.json
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas      4804 Apr 29 00:13 pilotlog.txt
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas   1530669 Apr 29 00:13 log.49863714._004947.job.log.1
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas       357 Apr 29 00:13 output.list
2026-04-28 20:13:26 (20212): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 29 00:13 runtime_log
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas   1914880 Apr 29 00:13 result.tar.gz
2026-04-28 20:13:26 (20212): Guest Log: -rw-r--r--. 1 atlas atlas      8366 Apr 29 00:13 runtime_log.err
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas       655 Apr 29 00:13 cdbe8a9a9435.diag
2026-04-28 20:13:26 (20212): Guest Log: Looking for outputfile HITS.49863714._004947.pool.root.1
2026-04-28 20:13:26 (20212): Guest Log: HITS file was successfully produced
2026-04-28 20:13:26 (20212): Guest Log: -rw-------. 1 atlas atlas 214530156 Apr 29 00:11 /home/atlas/RunAtlas/HITS.49863714._004947.pool.root.1
2026-04-28 20:13:34 (20212): Guest Log: Successfully finished the ATLAS job!
2026-04-28 20:13:34 (20212): Guest Log: Copying the results back to the shared directory!
2026-04-28 20:13:34 (20212): Guest Log:  *** Contents of shared directory: ***
2026-04-28 20:13:34 (20212): Guest Log: total 464592
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root 258563643 Apr 28 19:26 ATLAS.root_0
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root 214530156 Apr 29  2026 HITS.pool.root.1
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root      8404 Apr 28 19:26 init_data.xml
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root    697417 Apr 28 18:38 input.tar.gz
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root   1914880 Apr 29  2026 result.tar.gz
2026-04-28 20:13:34 (20212): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 18:38 start_atlas.sh
2026-04-28 20:13:34 (20212): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 20:13:34 (20212): VM Completion File Detected.
2026-04-28 20:13:34 (20212): Powering off VM.
2026-04-28 20:13:36 (20212): Successfully stopped VM.
2026-04-28 20:13:36 (20212): Deregistering VM. (boinc_c14db3c66e724d71, slot#16)
2026-04-28 20:13:36 (20212): Removing network bandwidth throttle group from VM.
2026-04-28 20:13:37 (20212): Removing VM from VirtualBox.
2026-04-28 20:13:43 (20212): called boinc_finish(0)

</stderr_txt>
]]>

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