Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:23:01 (2519895): wrapper (7.7.26015): starting
14:23:01 (2519895): wrapper: running run_atlas (--nthreads 9)
[2026-04-28 14:23:01] Arguments: --nthreads 9
[2026-04-28 14:23:01] Threads: 9
[2026-04-28 14:23:01] Checking for CVMFS
[2026-04-28 14:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 14:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 14:23:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 14:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 14:23:03] 2.13.3.0 6825 180224 144536 158977 2 277 36962499 40960000 12161 16776704 0 253067725 99.674 290697250 37159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-28 14:23:03] CVMFS is ok
[2026-04-28 14:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 14:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 14:23:03] Further information can be found at the LHC@home message board.
[2026-04-28 14:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 14:23:03] Checking for apptainer binary...
[2026-04-28 14:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 14:23:03] Running /usr/bin/apptainer --version
[2026-04-28 14:23:03] apptainer version 1.4.5-3.el9
[2026-04-28 14:23:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 14:23:04] c-210-31-2.aglt2.org
[2026-04-28 14:23:04] apptainer works
[2026-04-28 14:23:04] Set ATHENA_PROC_NUMBER=9
[2026-04-28 14:23:04] Set ATHENA_CORE_NUMBER=9
[2026-04-28 14:23:04] Starting ATLAS job with PandaID=7116464845
[2026-04-28 14:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 21:07:52]  *** The last 200 lines of the pilot log: ***
[2026-04-28 21:07:52] 2026-04-29 01:07:11,360 | INFO     | maximum number of monitored processes: 6
[2026-04-28 21:07:52] 2026-04-29 01:07:12,056 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 21:07:52] 2026-04-29 01:07:13,253 | INFO     | job 7116464845 has state=finished
[2026-04-28 21:07:52] 2026-04-29 01:07:13,254 | INFO     | preparing for final server update for job 7116464845 in state='finished'
[2026-04-28 21:07:52] 2026-04-29 01:07:13,254 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7116464845/jobReport.json
[2026-04-28 21:07:52] 2026-04-29 01:07:13,257 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-28 21:07:52] 2026-04-29 01:07:13,266 | INFO     | this job has now completed (state=finished)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,266 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,266 | INFO     | log transfer has been attempted: DONE
[2026-04-28 21:07:52] 2026-04-29 01:07:13,266 | INFO     | job 7116464845 has finished - writing final server update
[2026-04-28 21:07:52] 2026-04-29 01:07:13,267 | INFO     | total number of processed events: 400 (read)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,292 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7116464845/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,292 | INFO     | extracted standard info from prmon json
[2026-04-28 21:07:52] 2026-04-29 01:07:13,293 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 21:07:52] 2026-04-29 01:07:13,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 21:07:52] 2026-04-29 01:07:13,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 21:07:52] 2026-04-29 01:07:13,307 | INFO     | fitting pss+swap vs Time
[2026-04-28 21:07:52] 2026-04-29 01:07:13,308 | INFO     | sum of square deviations: 19255380743.83833
[2026-04-28 21:07:52] 2026-04-29 01:07:13,316 | INFO     | sum of deviations: -23907005515.979813
[2026-04-28 21:07:52] 2026-04-29 01:07:13,316 | INFO     | mean x (centered): 0.0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,316 | INFO     | mean y: 2613120.4974747472
[2026-04-28 21:07:52] 2026-04-29 01:07:13,316 | INFO     | intersect: 2613120.4974747472
[2026-04-28 21:07:52] 2026-04-29 01:07:13,317 | INFO     | chi2: 2.080605326806879
[2026-04-28 21:07:52] 2026-04-29 01:07:13,321 | INFO     | sum of square deviations: 18535177471.56519
[2026-04-28 21:07:52] 2026-04-29 01:07:13,325 | INFO     | sum of deviations: -24358156329.69563
[2026-04-28 21:07:52] 2026-04-29 01:07:13,325 | INFO     | mean x (centered): 0.0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,325 | INFO     | mean y: 2613024.964194373
[2026-04-28 21:07:52] 2026-04-29 01:07:13,329 | INFO     | intersect: 2613024.964194373
[2026-04-28 21:07:52] 2026-04-29 01:07:13,330 | INFO     | chi2: 2.0793723137184057
[2026-04-28 21:07:52] 2026-04-29 01:07:13,330 | INFO     | current chi2=2.0793723137184057 (change=0.05926222876521086 %)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,330 | INFO     | right removable region: 390
[2026-04-28 21:07:52] 2026-04-29 01:07:13,331 | INFO     | sum of square deviations: 18535123791.519188
[2026-04-28 21:07:52] 2026-04-29 01:07:13,338 | INFO     | sum of deviations: -94954753940.93605
[2026-04-28 21:07:52] 2026-04-29 01:07:13,338 | INFO     | mean x (centered): 0.0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,338 | INFO     | mean y: 2628091.4143222505
[2026-04-28 21:07:52] 2026-04-29 01:07:13,338 | INFO     | intersect: 2628091.4143222505
[2026-04-28 21:07:52] 2026-04-29 01:07:13,339 | INFO     | chi2: 0.4686453861261072
[2026-04-28 21:07:52] 2026-04-29 01:07:13,339 | INFO     | current chi2=0.4686453861261072 (change=77.4755269493931 %)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,340 | INFO     | sum of square deviations: 17833053104.68659
[2026-04-28 21:07:52] 2026-04-29 01:07:13,347 | INFO     | sum of deviations: -103534949201.1269
[2026-04-28 21:07:52] 2026-04-29 01:07:13,347 | INFO     | mean x (centered): 0.0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,347 | INFO     | mean y: 2629949.5569948186
[2026-04-28 21:07:52] 2026-04-29 01:07:13,347 | INFO     | intersect: 2629949.5569948186
[2026-04-28 21:07:52] 2026-04-29 01:07:13,348 | INFO     | chi2: 0.43241518010701696
[2026-04-28 21:07:52] 2026-04-29 01:07:13,348 | INFO     | current chi2=0.43241518010701696 (change=7.730835956494636 %)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,348 | INFO     | left removable region: 10
[2026-04-28 21:07:52] 2026-04-29 01:07:13,348 | INFO     | sum of square deviations: 17014321381.621155
[2026-04-28 21:07:52] 2026-04-29 01:07:13,358 | INFO     | sum of deviations: -102873890402.88417
[2026-04-28 21:07:52] 2026-04-29 01:07:13,359 | INFO     | mean x (centered): 0.0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,359 | INFO     | mean y: 2630097.3236842104
[2026-04-28 21:07:52] 2026-04-29 01:07:13,359 | INFO     | intersect: 2630097.3236842104
[2026-04-28 21:07:52] 2026-04-29 01:07:13,359 | INFO     | chi2: 0.42906157282564267
[2026-04-28 21:07:52] 2026-04-29 01:07:13,360 | INFO     | current memory leak: -6.05 B/s (using 380 data points, chi2=0.43)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | could have reported an average CPU frequency of 2859 MHz (17 samples)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | ..............................
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . Timing measurements:
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . get job = 0 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . initial setup = 20 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . payload setup = 28 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . stage-in = 0 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . payload execution = 24151 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . stage-out = 3 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,363 | INFO     | . log creation = 0 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,364 | INFO     | ..............................
[2026-04-28 21:07:52] 2026-04-29 01:07:13,788 | INFO     | 
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | job summary report
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | --------------------------------------------------
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | PanDA job id: 7116464845
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | task id: 49863869
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | errors: (none)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | pilot state: finished 
[2026-04-28 21:07:52] 2026-04-29 01:07:13,789 | INFO     | transexitcode: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | exeerrorcode: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | exeerrordiag: 
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | exitcode: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | exitmsg: OK
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | cpuconsumptiontime: 58634 s
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | nevents: 400
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | neventsw: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | pid: 2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | pgrp: 2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | corecount: 9
[2026-04-28 21:07:52] 2026-04-29 01:07:13,790 | INFO     | event service: False
[2026-04-28 21:07:52] 2026-04-29 01:07:13,791 | INFO     | sizes: {0: 2280605, 1: 2282490, 2: 2282490, 24184: 2317894, 24188: 2326892, 24189: 2326948, 24190: 2327334}
[2026-04-28 21:07:52] 2026-04-29 01:07:13,791 | INFO     | --------------------------------------------------
[2026-04-28 21:07:52] 2026-04-29 01:07:13,791 | INFO     | 
[2026-04-28 21:07:52] 2026-04-29 01:07:13,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,880 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 21:07:52] 2026-04-29 01:07:13,880 | INFO     | job 7116464845 has completed (purged errors)
[2026-04-28 21:07:52] 2026-04-29 01:07:13,880 | INFO     | overall cleanup function is called
[2026-04-28 21:07:52] 2026-04-29 01:07:14,906 | INFO     | --- collectZombieJob: --- 10, [2530183]
[2026-04-28 21:07:52] 2026-04-29 01:07:14,907 | INFO     | zombie collector waiting for pid 2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:14,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 21:07:52] 2026-04-29 01:07:14,907 | INFO     | collected zombie processes
[2026-04-28 21:07:52] 2026-04-29 01:07:14,907 | INFO     | will attempt to kill all subprocesses of pid=2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:15,218 | INFO     | process IDs to be killed: [2530183] (in reverse order)
[2026-04-28 21:07:52] 2026-04-29 01:07:15,343 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 21:07:52] 2026-04-29 01:07:15,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 21:07:52] 2026-04-29 01:07:15,356 | INFO     | did not find any defunct processes belonging to 2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:15,369 | INFO     | did not find any defunct processes belonging to 2530183
[2026-04-28 21:07:52] 2026-04-29 01:07:15,369 | INFO     | Ready for new job
[2026-04-28 21:07:52] 2026-04-29 01:07:15,372 | INFO     | ***************************************
[2026-04-28 21:07:52] 2026-04-29 01:07:15,372 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 21:07:52] 2026-04-29 01:07:15,372 | INFO     | ***************************************
[2026-04-28 21:07:52] 2026-04-29 01:07:15,373 | INFO     | 
[2026-04-28 21:07:52] 2026-04-29 01:07:15,376 | INFO     | architecture information:
[2026-04-28 21:07:52] 2026-04-29 01:07:15,376 | INFO     | executing command: cat /etc/os-release
[2026-04-28 21:07:52] 2026-04-29 01:07:15,420 | INFO     | cat /etc/os-release:
[2026-04-28 21:07:52] NAME="CentOS Linux"
[2026-04-28 21:07:52] VERSION="7 (Core)"
[2026-04-28 21:07:52] ID="centos"
[2026-04-28 21:07:52] ID_LIKE="rhel fedora"
[2026-04-28 21:07:52] VERSION_ID="7"
[2026-04-28 21:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 21:07:52] ANSI_COLOR="0;31"
[2026-04-28 21:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 21:07:52] HOME_URL="https://www.centos.org/"
[2026-04-28 21:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 21:07:52] 
[2026-04-28 21:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 21:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 21:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 21:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 21:07:52] 
[2026-04-28 21:07:52] 2026-04-29 01:07:15,421 | INFO     | ***************************************
[2026-04-28 21:07:52] 2026-04-29 01:07:15,924 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-28 21:07:52] 2026-04-29 01:07:15,977 | INFO     | sufficient remaining disk space (73788293120 B)
[2026-04-28 21:07:52] 2026-04-29 01:07:15,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 21:07:52] 2026-04-29 01:07:15,979 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 21:07:52] 2026-04-29 01:07:15,979 | INFO     | update_server=False
[2026-04-28 21:07:52] 2026-04-29 01:07:15,979 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 21:07:52] 2026-04-29 01:07:16,003 | INFO     | all payload control threads have been joined
[2026-04-28 21:07:52] 2026-04-29 01:07:16,427 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 21:07:52] 2026-04-29 01:07:16,428 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 21:07:52] 2026-04-29 01:07:16,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 21:07:52] 2026-04-29 01:07:16,432 | INFO     | will abort loop
[2026-04-28 21:07:52] 2026-04-29 01:07:16,476 | INFO     | all data control threads have been joined
[2026-04-28 21:07:52] 2026-04-29 01:07:16,510 | INFO     | all job control threads have been joined
[2026-04-28 21:07:52] 2026-04-29 01:07:16,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 21:07:52] 2026-04-29 01:07:16,985 | INFO     | [job] retrieve thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,009 | INFO     | [payload] control thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,054 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,314 | INFO     | [job] validate thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,439 | INFO     | [job] job monitor thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,483 | INFO     | [data] control thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,516 | INFO     | [job] control thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,620 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,621 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:17,702 | INFO     | [payload] failed_post thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:18,112 | INFO     | [data] copytool_in thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:18,341 | INFO     | [payload] validate_post thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:18,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 21:07:52] 2026-04-29 01:07:18,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 21:07:52] 2026-04-29 01:07:18,699 | INFO     | [data] copytool_out thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:19,579 | INFO     | [job] queue monitor thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:22,376 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 21:07:52] 2026-04-29 01:07:45,237 | INFO     | [monitor] cgroup control has ended
[2026-04-28 21:07:52] 2026-04-29 01:07:45,774 | INFO     | PID=2524089 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 21:07:52] 2026-04-29 01:07:45,775 | INFO     | .. there are 9 such processes running
[2026-04-28 21:07:52] 2026-04-29 01:07:45,775 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 21:07:52] 2026-04-29 01:07:45,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 21:07:52] 2026-04-29 01:07:45,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 21:07:52] 2026-04-29 01:07:46,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870755542848)>', '<ExcThread(monitor, started 139870408259328)>']
[2026-04-28 21:07:52] 2026-04-29 01:07:47,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 21:07:52] 2026-04-29 01:07:47,789 | INFO     | [monitor] control thread has ended
[2026-04-28 21:07:52] 2026-04-29 01:07:51,875 | INFO     | all workflow threads have been joined
[2026-04-28 21:07:52] 2026-04-29 01:07:51,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 21:07:52] 2026-04-29 01:07:51,876 | INFO     | traces error code: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:51,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 21:07:52] 2026-04-29 01:07:52,708 [wrapper] ==== pilot stdout END ====
[2026-04-28 21:07:52] 2026-04-29 01:07:52,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 21:07:52] 2026-04-29 01:07:52,726 [wrapper] pilotpid: 2524089
[2026-04-28 21:07:52] 2026-04-29 01:07:52,755 [wrapper] Pilot exit status: 0
[2026-04-28 21:07:52] 2026-04-29 01:07:52,776 [wrapper] pandaids: 7116464845
[2026-04-28 21:07:52] 2026-04-29 01:07:52,839 [wrapper] cleanup supervisor_pilot 3163686 2524090
[2026-04-28 21:07:52] 2026-04-29 01:07:52,843 [wrapper] Test setup, not cleaning
[2026-04-28 21:07:52] 2026-04-29 01:07:52,859 [wrapper] apfmon messages muted
[2026-04-28 21:07:52] 2026-04-29 01:07:52,862 [wrapper] ==== wrapper stdout END ====
[2026-04-28 21:07:52] 2026-04-29 01:07:52,865 [wrapper] ==== wrapper stderr END ====
[2026-04-28 21:07:52]  *** Error codes and diagnostics ***
[2026-04-28 21:07:52]     "exeErrorCode": 0,
[2026-04-28 21:07:52]     "pilotErrorCode": 0,
[2026-04-28 21:07:52]  *** Listing of results directory ***
[2026-04-28 21:07:52] total 468744
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas    683926 Apr 28 10:02 pilot3.tar.gz
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas      5631 Apr 28 10:02 queuedata.json
[2026-04-28 21:07:52] -rwx------. 1 boincer umatlas     36322 Apr 28 10:03 runpilot2-wrapper.sh
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas       100 Apr 28 14:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 21:07:52] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 28 14:23 run_atlas
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas       105 Apr 28 14:23 job.xml
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas 261631512 Apr 28 14:23 EVNT.49863867._000071.pool.root.1
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 14:23 start_atlas.sh
[2026-04-28 21:07:52] drwxrwx--x. 2 boincer umatlas      4096 Apr 28 14:23 shared
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas    697406 Apr 28 14:23 input.tar.gz
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas         0 Apr 28 14:23 boinc_lockfile
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas      2574 Apr 28 14:23 pandaJob.out
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas        57 Apr 28 14:23 setup.sh.local
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas   1001831 Apr 28 14:23 agis_schedconf.cvmfs.json
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas       443 Apr 28 14:23 workernode_map.json
[2026-04-28 21:07:52] drwx------. 5 boincer umatlas      4096 Apr 28 14:24 pilot3
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas      6760 Apr 28 21:01 init_data.xml
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas 209143180 Apr 28 21:06 HITS.49863869._001763.pool.root.1
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas       488 Apr 28 21:06 boinc_task_state.xml
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas        95 Apr 28 21:06 pilot_heartbeat.json
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas      1042 Apr 28 21:07 memory_monitor_summary.json
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas   1512704 Apr 28 21:07 agis_ddmendpoints.agis.ALL.json
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas    491227 Apr 28 21:07 log.49863869._001763.job.log.tgz.1
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas      6409 Apr 28 21:07 heartbeat_new.json
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas      6300 Apr 28 21:07 heartbeat.json
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas        28 Apr 28 21:07 wrapper_checkpoint.txt
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas      8192 Apr 28 21:07 boinc_mmap_file
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas      5008 Apr 28 21:07 pilotlog.txt
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas   2045985 Apr 28 21:07 log.49863869._001763.job.log.1
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas       357 Apr 28 21:07 output.list
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas       410 Apr 28 21:07 runtime_log
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas   2560000 Apr 28 21:07 result.tar.gz
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas      8975 Apr 28 21:07 runtime_log.err
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas       659 Apr 28 21:07 be2f99ae67e9.diag
[2026-04-28 21:07:52] -rw-r--r--. 1 boincer umatlas     21234 Apr 28 21:07 stderr.txt
[2026-04-28 21:07:52] HITS file was successfully produced:
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas 209143180 Apr 28 21:06 shared/HITS.pool.root.1
[2026-04-28 21:07:52]  *** Contents of shared directory: ***
[2026-04-28 21:07:52] total 462948
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas 261631512 Apr 28 14:23 ATLAS.root_0
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 14:23 start_atlas.sh
[2026-04-28 21:07:52] -rw-r--r--. 2 boincer umatlas    697406 Apr 28 14:23 input.tar.gz
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas 209143180 Apr 28 21:06 HITS.pool.root.1
[2026-04-28 21:07:52] -rw-------. 1 boincer umatlas   2560000 Apr 28 21:07 result.tar.gz
21:07:54 (2519895): run_atlas exited; CPU time 59146.828107
21:07:54 (2519895): called boinc_finish(0)

</stderr_txt>
]]>

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