Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:17:36 (1958731): wrapper (7.7.26015): starting
17:17:36 (1958731): wrapper: running run_atlas (--nthreads 12)
[2026-04-29 17:17:36] Arguments: --nthreads 12
[2026-04-29 17:17:36] Threads: 12
[2026-04-29 17:17:36] Checking for CVMFS
[2026-04-29 17:17:36] No cvmfs_config command found, will try listing directly
[2026-04-29 17:17:36] CVMFS is ok
[2026-04-29 17:17:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 17:17:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 17:17:36] Further information can be found at the LHC@home message board.
[2026-04-29 17:17:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 17:17:36] Checking for apptainer binary...
[2026-04-29 17:17:36] which: no apptainer in ((null))
[2026-04-29 17:17:36] apptainer is not installed, using version from CVMFS
[2026-04-29 17:17:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 17:17:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-29 17:17:36] apptainer works
[2026-04-29 17:17:36] Set ATHENA_PROC_NUMBER=12
[2026-04-29 17:17:36] Set ATHENA_CORE_NUMBER=12
[2026-04-29 17:17:36] Starting ATLAS job with PandaID=7116128288
[2026-04-29 17:17:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 17:48:57]  *** The last 200 lines of the pilot log: ***
[2026-04-29 17:48:57]  domain=
[2026-04-29 17:48:57]  filesize=339494
[2026-04-29 17:48:57]  filetype=log
[2026-04-29 17:48:57]  guid=5e3d81ee-4f0c-432d-ab4b-25f375a7c0b4
[2026-04-29 17:48:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-29 17:48:57]  is_altstaged=None
[2026-04-29 17:48:57]  is_tar=False
[2026-04-29 17:48:57]  lfn=log.49912801._000193.job.log.tgz.1
[2026-04-29 17:48:57]  mtime=0
[2026-04-29 17:48:57]  protocol_id=None
[2026-04-29 17:48:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-29 17:48:57]  replicas=None
[2026-04-29 17:48:57]  scope=mc23_13p6TeV
[2026-04-29 17:48:57]  status=None
[2026-04-29 17:48:57]  status_code=0
[2026-04-29 17:48:57]  storage_token=
[2026-04-29 17:48:57]  surl=/var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7116128288/log.49912801._000193.job.log.tgz.1
[2026-04-29 17:48:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/6a/log.49912801._000193.job.log.tgz.1
[2026-04-29 17:48:57]  workdir=None
[2026-04-29 17:48:57] ]
[2026-04-29 17:48:57] 2026-04-29 15:48:10,952 | INFO     | monitor loop #140: job 0:7116128288 is in state 'stageout'
[2026-04-29 17:48:57] 2026-04-29 15:48:10,966 | WARNING  | aborting job monitor tasks since payload process 1970013 is not running
[2026-04-29 17:48:57] 2026-04-29 15:48:10,966 | INFO     | transferring file log.49912801._000193.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7116128288/log.49912801._000193.job.log.tgz.1 to /var/lib/
[2026-04-29 17:48:57] 2026-04-29 15:48:10,967 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7116128288/log.49912801._000193.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/1/
[2026-04-29 17:48:57] 2026-04-29 15:48:10,980 | INFO     | adding to output.list: log.49912801._000193.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/6a/log.49912801._000193.job.log.tg
[2026-04-29 17:48:57] 2026-04-29 15:48:10,980 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-29 17:48:57] 2026-04-29 15:48:10,980 | INFO     | summary of transferred files:
[2026-04-29 17:48:57] 2026-04-29 15:48:10,980 | INFO     |  -- lfn=log.49912801._000193.job.log.tgz.1, status_code=0, status=transferred
[2026-04-29 17:48:57] 2026-04-29 15:48:10,980 | INFO     | stage-out finished correctly
[2026-04-29 17:48:57] 2026-04-29 15:48:11,239 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-29 17:48:57] 2026-04-29 15:48:11,283 | INFO     | job 7116128288 has state=finished
[2026-04-29 17:48:57] 2026-04-29 15:48:11,284 | INFO     | preparing for final server update for job 7116128288 in state='finished'
[2026-04-29 17:48:57] 2026-04-29 15:48:11,284 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7116128288/jobReport.json
[2026-04-29 17:48:57] 2026-04-29 15:48:11,285 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/1/workernode_map.json
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | INFO     | this job has now completed (state=finished)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | INFO     | log transfer has been attempted: DONE
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | INFO     | job 7116128288 has finished - writing final server update
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2030092/.job.ad'
[2026-04-29 17:48:57] 2026-04-29 15:48:11,286 | INFO     | total number of processed events: 400 (read)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,303 | INFO     | using path: /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7116128288/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,303 | INFO     | extracted standard info from prmon json
[2026-04-29 17:48:57] 2026-04-29 15:48:11,303 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 17:48:57] 2026-04-29 15:48:11,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 17:48:57] 2026-04-29 15:48:11,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 17:48:57] 2026-04-29 15:48:11,304 | INFO     | fitting pss+swap vs Time
[2026-04-29 17:48:57] 2026-04-29 15:48:11,304 | INFO     | sum of square deviations: 3765652.0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,304 | INFO     | sum of deviations: -458425370.00000006
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | mean x (centered): 0.0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | mean y: 2853487.9565217393
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | intersect: 2853487.9565217393
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | chi2: 0.0020011131775900196
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | current memory leak: -121.74 B/s (using 23 data points, chi2=0.00)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | could have reported an average CPU frequency of 3587 MHz (5 samples)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | ..............................
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . Timing measurements:
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . get job = 0 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . initial setup = 4 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . payload setup = 7 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . stage-in = 0 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . payload execution = 1798 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . stage-out = 0 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | . log creation = 0 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,305 | INFO     | ..............................
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | 
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | job summary report
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | --------------------------------------------------
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | PanDA job id: 7116128288
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | task id: 49912801
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | errors: (none)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | pilot state: finished 
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | transexitcode: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | exeerrorcode: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | exeerrordiag: 
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | exitcode: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | exitmsg: OK
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | cpuconsumptiontime: 19151 s
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | nevents: 400
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | neventsw: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | pid: 1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | pgrp: 1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | corecount: 12
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | event service: False
[2026-04-29 17:48:57] 2026-04-29 15:48:11,352 | INFO     | sizes: {0: 2282636, 11: 2282636, 1809: 2307588, 1810: 2307587, 1811: 2316891}
[2026-04-29 17:48:57] 2026-04-29 15:48:11,353 | INFO     | --------------------------------------------------
[2026-04-29 17:48:57] 2026-04-29 15:48:11,353 | INFO     | 
[2026-04-29 17:48:57] 2026-04-29 15:48:11,353 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/1
[2026-04-29 17:48:57] 2026-04-29 15:48:11,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | job 7116128288 has completed (purged errors)
[2026-04-29 17:48:57] 2026-04-29 15:48:11,368 | INFO     | overall cleanup function is called
[2026-04-29 17:48:57] 2026-04-29 15:48:12,375 | INFO     | --- collectZombieJob: --- 10, [1970013]
[2026-04-29 17:48:57] 2026-04-29 15:48:12,376 | INFO     | zombie collector waiting for pid 1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:12,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 17:48:57] 2026-04-29 15:48:12,376 | INFO     | collected zombie processes
[2026-04-29 17:48:57] 2026-04-29 15:48:12,376 | INFO     | will attempt to kill all subprocesses of pid=1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:12,672 | INFO     | process IDs to be killed: [1970013] (in reverse order)
[2026-04-29 17:48:57] 2026-04-29 15:48:12,815 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 17:48:57] 2026-04-29 15:48:12,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 17:48:57] 2026-04-29 15:48:12,839 | INFO     | did not find any defunct processes belonging to 1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:12,862 | INFO     | did not find any defunct processes belonging to 1970013
[2026-04-29 17:48:57] 2026-04-29 15:48:12,863 | INFO     | Ready for new job
[2026-04-29 17:48:57] 2026-04-29 15:48:12,864 | INFO     | ***************************************
[2026-04-29 17:48:57] 2026-04-29 15:48:12,864 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 17:48:57] 2026-04-29 15:48:12,864 | INFO     | ***************************************
[2026-04-29 17:48:57] 2026-04-29 15:48:12,864 | INFO     | 
[2026-04-29 17:48:57] 2026-04-29 15:48:12,870 | INFO     | architecture information:
[2026-04-29 17:48:57] 2026-04-29 15:48:12,870 | INFO     | executing command: cat /etc/os-release
[2026-04-29 17:48:57] 2026-04-29 15:48:12,882 | INFO     | cat /etc/os-release:
[2026-04-29 17:48:57] NAME="CentOS Linux"
[2026-04-29 17:48:57] VERSION="7 (Core)"
[2026-04-29 17:48:57] ID="centos"
[2026-04-29 17:48:57] ID_LIKE="rhel fedora"
[2026-04-29 17:48:57] VERSION_ID="7"
[2026-04-29 17:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 17:48:57] ANSI_COLOR="0;31"
[2026-04-29 17:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 17:48:57] HOME_URL="https://www.centos.org/"
[2026-04-29 17:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 17:48:57] 
[2026-04-29 17:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 17:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 17:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 17:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 17:48:57] 
[2026-04-29 17:48:57] 2026-04-29 15:48:12,882 | INFO     | ***************************************
[2026-04-29 17:48:57] 2026-04-29 15:48:13,385 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/1
[2026-04-29 17:48:57] 2026-04-29 15:48:13,397 | INFO     | sufficient remaining disk space (114041028608 B)
[2026-04-29 17:48:57] 2026-04-29 15:48:13,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 17:48:57] 2026-04-29 15:48:13,397 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 17:48:57] 2026-04-29 15:48:13,397 | INFO     | update_server=False
[2026-04-29 17:48:57] 2026-04-29 15:48:13,397 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 17:48:57] 2026-04-29 15:48:13,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 17:48:57] 2026-04-29 15:48:13,469 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-29 17:48:57] 2026-04-29 15:48:13,470 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-29 17:48:57] 2026-04-29 15:48:13,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:48:57] 2026-04-29 15:48:13,470 | INFO     | will abort loop
[2026-04-29 17:48:57] 2026-04-29 15:48:13,967 | INFO     | all data control threads have been joined
[2026-04-29 17:48:57] 2026-04-29 15:48:13,980 | INFO     | all payload control threads have been joined
[2026-04-29 17:48:57] 2026-04-29 15:48:14,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 17:48:57] 2026-04-29 15:48:14,403 | INFO     | [job] retrieve thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:14,470 | INFO     | [job] job monitor thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:14,956 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:14,973 | INFO     | [data] control thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:14,986 | INFO     | [payload] control thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:14,986 | INFO     | all job control threads have been joined
[2026-04-29 17:48:57] 2026-04-29 15:48:15,112 | INFO     | [job] validate thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,283 | INFO     | [payload] failed_post thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,490 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,547 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,619 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,687 | INFO     | [data] copytool_in thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,703 | INFO     | [payload] validate_post thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:15,990 | INFO     | [job] control thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:16,038 | INFO     | [data] copytool_out thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:16,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 17:48:57] 2026-04-29 15:48:17,367 | INFO     | [job] queue monitor thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:17,404 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 17:48:57] 2026-04-29 15:48:42,914 | INFO     | PID=1963344 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 17:48:57] 2026-04-29 15:48:42,914 | INFO     | .. there are 16 such processes running
[2026-04-29 17:48:57] 2026-04-29 15:48:42,916 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 17:48:57] 2026-04-29 15:48:42,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 17:48:57] 2026-04-29 15:48:42,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 17:48:57] 2026-04-29 15:48:51,429 | INFO     | [monitor] cgroup control has ended
[2026-04-29 17:48:57] 2026-04-29 15:48:52,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23102669080384)>', '<ExcThread(monitor, started 23102358546176)>']
[2026-04-29 17:48:57] 2026-04-29 15:48:52,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 17:48:57] 2026-04-29 15:48:52,970 | INFO     | [monitor] control thread has ended
[2026-04-29 17:48:57] 2026-04-29 15:48:57,455 | INFO     | all workflow threads have been joined
[2026-04-29 17:48:57] 2026-04-29 15:48:57,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 17:48:57] 2026-04-29 15:48:57,456 | INFO     | traces error code: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:57,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 17:48:57] 2026-04-29 15:48:57,564 [wrapper] ==== pilot stdout END ====
[2026-04-29 17:48:57] 2026-04-29 15:48:57,567 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 17:48:57] 2026-04-29 15:48:57,569 [wrapper] pilotpid: 1963344
[2026-04-29 17:48:57] 2026-04-29 15:48:57,570 [wrapper] Pilot exit status: 0
[2026-04-29 17:48:57] 2026-04-29 15:48:57,578 [wrapper] pandaids: 7116128288
[2026-04-29 17:48:57] 2026-04-29 15:48:57,680 [wrapper] cleanup supervisor_pilot 2147452 1963345
[2026-04-29 17:48:57] 2026-04-29 15:48:57,682 [wrapper] Test setup, not cleaning
[2026-04-29 17:48:57] 2026-04-29 15:48:57,688 [wrapper] apfmon messages muted
[2026-04-29 17:48:57] 2026-04-29 15:48:57,690 [wrapper] ==== wrapper stdout END ====
[2026-04-29 17:48:57] 2026-04-29 15:48:57,691 [wrapper] ==== wrapper stderr END ====
[2026-04-29 17:48:57]  *** Error codes and diagnostics ***
[2026-04-29 17:48:57]     "exeErrorCode": 0,
[2026-04-29 17:48:57]     "pilotErrorCode": 0,
[2026-04-29 17:48:57]  *** Listing of results directory ***
[2026-04-29 17:48:57] total 464484
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc    683926 Apr 26 18:08 pilot3.tar.gz
[2026-04-29 17:48:57] -rwx------. 1 boinc boinc     36322 Apr 26 18:55 runpilot2-wrapper.sh
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc      5631 Apr 26 18:56 queuedata.json
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc       100 Apr 29 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 17:48:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 17:17 run_atlas
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc       105 Apr 29 17:17 job.xml
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc     15667 Apr 29 17:17 start_atlas.sh
[2026-04-29 17:48:57] drwxrwx--x. 2 boinc boinc      4096 Apr 29 17:17 shared
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc    697443 Apr 29 17:17 input.tar.gz
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc      6631 Apr 29 17:17 init_data.xml
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc 275374425 Apr 29 17:17 EVNT.49912796._000008.pool.root.1
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc         0 Apr 29 17:17 boinc_lockfile
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc      2677 Apr 29 17:17 pandaJob.out
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc   1001893 Apr 29 17:17 agis_schedconf.cvmfs.json
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc   1512704 Apr 29 17:17 agis_ddmendpoints.agis.ALL.json
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc       445 Apr 29 17:17 workernode_map.json
[2026-04-29 17:48:57] drwx------. 5 boinc boinc      4096 Apr 29 17:17 pilot3
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc 195001252 Apr 29 17:47 HITS.49912801._000193.pool.root.1
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc       486 Apr 29 17:47 boinc_task_state.xml
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc      1026 Apr 29 17:48 memory_monitor_summary.json
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc    339494 Apr 29 17:48 log.49912801._000193.job.log.tgz.1
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc      6379 Apr 29 17:48 heartbeat_new.json
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc      6270 Apr 29 17:48 heartbeat.json
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc        95 Apr 29 17:48 pilot_heartbeat.json
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc        26 Apr 29 17:48 wrapper_checkpoint.txt
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc      5020 Apr 29 17:48 pilotlog.txt
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc    219831 Apr 29 17:48 log.49912801._000193.job.log.1
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc       357 Apr 29 17:48 output.list
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc      8192 Apr 29 17:48 boinc_mmap_file
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc       410 Apr 29 17:48 runtime_log
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc    573440 Apr 29 17:48 result.tar.gz
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc      8846 Apr 29 17:48 runtime_log.err
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc       660 Apr 29 17:48 43700b5249b4.diag
[2026-04-29 17:48:57] -rw-r--r--. 1 boinc boinc     20918 Apr 29 17:48 stderr.txt
[2026-04-29 17:48:57] HITS file was successfully produced:
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc 195001252 Apr 29 17:47 shared/HITS.pool.root.1
[2026-04-29 17:48:57]  *** Contents of shared directory: ***
[2026-04-29 17:48:57] total 460624
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc     15667 Apr 29 17:17 start_atlas.sh
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc    697443 Apr 29 17:17 input.tar.gz
[2026-04-29 17:48:57] -rw-r--r--. 2 boinc boinc 275374425 Apr 29 17:17 ATLAS.root_0
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc 195001252 Apr 29 17:47 HITS.pool.root.1
[2026-04-29 17:48:57] -rw-------. 1 boinc boinc    573440 Apr 29 17:48 result.tar.gz
17:48:59 (1958731): run_atlas exited; CPU time 19201.912325
17:48:59 (1958731): called boinc_finish(0)

</stderr_txt>
]]>

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