Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-29 02:21:51 (44348): vboxwrapper version 26210
2026-04-29 02:21:51 (44348): BOINC client version: 8.2.4
2026-04-29 02:21:51 (44348): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-04-29 02:21:51 (44348): Successfully copied 'init_data.xml' to the shared directory.
2026-04-29 02:21:52 (44348): Create VM. (boinc_992eb475c138833d, slot#1)
2026-04-29 02:21:52 (44348): Setting Memory Size for VM. (4800MB)
2026-04-29 02:21:53 (44348): Setting CPU Count for VM. (8)
2026-04-29 02:21:53 (44348): Setting Chipset Options for VM.
2026-04-29 02:21:53 (44348): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-29 02:21:53 (44348): Setting Boot Options for VM.
2026-04-29 02:21:54 (44348): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-29 02:21:54 (44348): Enabling VM Network Access.
2026-04-29 02:21:55 (44348): Disabling USB Support for VM.
2026-04-29 02:21:55 (44348): Disabling COM Port Support for VM.
2026-04-29 02:21:55 (44348): Disabling LPT Port Support for VM.
2026-04-29 02:21:56 (44348): Disabling Audio Support for VM.
2026-04-29 02:21:56 (44348): Disabling Clipboard Support for VM.
2026-04-29 02:21:56 (44348): Disabling Drag and Drop Support for VM.
2026-04-29 02:21:56 (44348): Adding storage controller(s) to VM.
2026-04-29 02:21:57 (44348): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-29 02:21:57 (44348): Adding VirtualBox Guest Additions to VM.
2026-04-29 02:21:58 (44348): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-29 02:21:58 (44348): forwarding host port 52583 to guest port 80
2026-04-29 02:21:58 (44348): Enabling remote desktop for VM.
2026-04-29 02:21:58 (44348): Required extension pack not installed, remote desktop not enabled.
2026-04-29 02:21:58 (44348): Enabling shared directory for VM.
2026-04-29 02:21:59 (44348): Starting VM using VBoxManage interface. (boinc_992eb475c138833d, slot#1)
2026-04-29 02:22:04 (44348): Successfully started VM. (PID = '61052')
2026-04-29 02:22:04 (44348): Reporting VM Process ID to BOINC.
2026-04-29 02:22:04 (44348): Guest Log: BIOS: VirtualBox 7.0.6
2026-04-29 02:22:04 (44348): Guest Log: CPUID EDX: 0x178bfbff
2026-04-29 02:22:04 (44348): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-29 02:22:04 (44348): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-29 02:22:04 (44348): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-29 02:22:04 (44348): Detected: Web Application Enabled (http://localhost:52583)
2026-04-29 02:22:04 (44348): Preference change detected
2026-04-29 02:22:04 (44348): Setting CPU throttle for VM. (100%)
2026-04-29 02:22:05 (44348): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-29 02:22:06 (44348): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-29 02:22:06 (44348): Guest Log: BIOS: Booting from Hard Disk...
2026-04-29 02:22:09 (44348): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-29 02:22:09 (44348): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-29 02:22:09 (44348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-29 02:22:16 (44348): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-29 02:22:16 (44348): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-29 02:22:26 (44348): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000148 main     Log opened 2026-04-29T02:22:24.526367000Z
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000237 main     OS Product: Linux
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000259 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000277 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000294 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000295 main     Process ID: 1371
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000295 main     Package type: LINUX_64BITS_GENERIC
2026-04-29 02:22:26 (44348): Guest Log: 00:00:00.000817 main     5.2.32 r132073 started. Verbose level = 0
2026-04-29 02:22:26 (44348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-29 02:22:26 (44348): Guest Log: [INFO] Mounting shared directory
2026-04-29 02:22:26 (44348): Guest Log: [INFO] Checking for init_data.xml
2026-04-29 02:22:36 (44348): Guest Log: 00:00:10.003237 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 712 357 000ns (GuestNow=1 777 454 556 241 385 000 ns GuestLast=1 777 429 344 529 028 000 ns fSetTimeLastLoop=true )
2026-04-29 02:22:37 (44348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-29 02:22:37 (44348): Guest Log: [INFO] Detected branch: prod
2026-04-29 02:22:37 (44348): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-29 02:22:37 (44348): Guest Log: Copying input files
2026-04-29 02:22:39 (44348): Guest Log: Copied input files into RunAtlas.
2026-04-29 02:22:39 (44348): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-29 02:22:39 (44348): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-29 02:22:39 (44348): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-29 02:22:39 (44348): Guest Log: Further information can be found at the LHC@home message board.
2026-04-29 02:23:35 (44348): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-29 02:23:35 (44348): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-29 02:23:35 (44348): Guest Log: 2.6.3.0 1654 1 30152 159001 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-29 02:23:39 (44348): Guest Log: copied the webapp to /var/www
2026-04-29 02:23:39 (44348): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-29 02:23:39 (44348): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-29 02:23:41 (44348): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-29 02:23:41 (44348): Guest Log:  *** Starting ATLAS job. (PandaID=7116154607 taskID=49545114) ***
2026-04-29 03:33:27 (44348): VM state change detected. (old = 'running', new = 'paused')
2026-04-29 04:16:46 (44348): VM state change detected. (old = 'paused', new = 'running')
2026-04-29 04:16:52 (44348): Guest Log: 01:11:05.662841 timesync vgsvcTimeSyncWorker: Radical host time change: 2 603 808 000 000ns (HostNow=1 777 461 364 345 000 000 ns HostLast=1 777 458 760 537 000 000 ns)
2026-04-29 04:17:02 (44348): Guest Log: 01:11:15.665254 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 562 452 765 000ns (GuestNow=1 777 461 374 350 389 000 ns GuestLast=1 777 458 811 897 624 000 ns fSetTimeLastLoop=true )
2026-04-29 04:30:46 (44348): Guest Log:  *** Job finished ***
2026-04-29 04:30:46 (44348): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:50,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:50,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:51,544 | INFO     | [monitor] cgroup control has ended
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:52,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371527472960)>', '<ExcThread(monitor, started 140370704840448)>']
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:53,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:53,261 | INFO     | [monitor] control thread has ended
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,342 | INFO     | all workflow threads have been joined
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,342 | INFO     | end of generic workflow (traces error code: 0)
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,342 | INFO     | traces error code: 0
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,505 [wrapper] ==== pilot stdout END ====
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,512 [wrapper] ==== wrapper stdout RESUME ====
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,517 [wrapper] pilotpid: 6129
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,526 [wrapper] Pilot exit status: 0
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:57,982 [wrapper] pandaids: 7116154607
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:58,025 [wrapper] cleanup supervisor_pilot 16419 6130
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:58,033 [wrapper] Test setup, not cleaning
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:58,042 [wrapper] apfmon messages muted
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:58,051 [wrapper] ==== wrapper stdout END ====
2026-04-29 04:30:46 (44348): Guest Log: 2026-04-29 11:29:58,058 [wrapper] ==== wrapper stderr END ====
2026-04-29 04:30:46 (44348): Guest Log:  *** Error codes and diagnostics ***
2026-04-29 04:30:46 (44348): Guest Log:     "exeErrorCode": 0,
2026-04-29 04:30:46 (44348): Guest Log:     "pilotErrorCode": 0,
2026-04-29 04:30:46 (44348): Guest Log:  *** Listing of results directory ***
2026-04-29 04:30:46 (44348): Guest Log: total 188476
2026-04-29 04:30:46 (44348): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 26 17:05 pilot3.tar.gz
2026-04-29 04:30:46 (44348): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 26 17:25 runpilot2-wrapper.sh
2026-04-29 04:30:46 (44348): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 26 17:25 queuedata.json
2026-04-29 04:30:46 (44348): Guest Log: -rwxr-xr-x. 1 atlas atlas      9455 Apr 29 09:22 init_data.xml
2026-04-29 04:30:46 (44348): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 29 09:22 start_atlas.sh
2026-04-29 04:30:46 (44348): Guest Log: -rwxr-xr-x. 1 atlas atlas    697430 Apr 29 09:22 input.tar.gz
2026-04-29 04:30:46 (44348): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 29 09:22 EVNT.49539591._000771.pool.root.1 -> /data/./ATLAS.root_0
2026-04-29 04:30:46 (44348): Guest Log: -rw-r--r--. 1 atlas atlas      2604 Apr 29 09:23 pandaJob.out
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas   1001891 Apr 29 09:26 agis_schedconf.cvmfs.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 29 09:26 agis_ddmendpoints.agis.ALL.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas       430 Apr 29 09:26 workernode_map.json
2026-04-29 04:30:46 (44348): Guest Log: drwx------. 5 atlas atlas      4096 Apr 29 09:27 pilot3
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas 187389636 Apr 29 11:28 HITS.49545114._036280.pool.root.1
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 29 11:29 memory_monitor_summary.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas    305490 Apr 29 11:29 log.49545114._036280.job.log.tgz.1
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas        97 Apr 29 11:29 pilot_heartbeat.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas      6365 Apr 29 11:29 heartbeat_new.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas      6256 Apr 29 11:29 heartbeat.json
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas      4876 Apr 29 11:29 pilotlog.txt
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas    462393 Apr 29 11:29 log.49545114._036280.job.log.1
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas       357 Apr 29 11:29 output.list
2026-04-29 04:30:46 (44348): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 29 11:29 runtime_log
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas    788480 Apr 29 11:29 result.tar.gz
2026-04-29 04:30:46 (44348): Guest Log: -rw-r--r--. 1 atlas atlas      8386 Apr 29 11:29 runtime_log.err
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas       658 Apr 29 11:29 4a859ca66f9a.diag
2026-04-29 04:30:46 (44348): Guest Log: Looking for outputfile HITS.49545114._036280.pool.root.1
2026-04-29 04:30:46 (44348): Guest Log: HITS file was successfully produced
2026-04-29 04:30:46 (44348): Guest Log: -rw-------. 1 atlas atlas 187389636 Apr 29 11:28 /home/atlas/RunAtlas/HITS.49545114._036280.pool.root.1
2026-04-29 04:30:47 (44348): Guest Log: Successfully finished the ATLAS job!
2026-04-29 04:30:47 (44348): Guest Log: Copying the results back to the shared directory!
2026-04-29 04:30:47 (44348): Guest Log:  *** Contents of shared directory: ***
2026-04-29 04:30:47 (44348): Guest Log: total 458544
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root 280635753 Apr 29 09:21 ATLAS.root_0
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root 187389636 Apr 29  2026 HITS.pool.root.1
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root      9455 Apr 29 09:21 init_data.xml
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root    697430 Apr 28 16:33 input.tar.gz
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root    788480 Apr 29  2026 result.tar.gz
2026-04-29 04:30:47 (44348): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 16:33 start_atlas.sh
2026-04-29 04:30:47 (44348): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-29 04:30:48 (44348): VM Completion File Detected.
2026-04-29 04:30:48 (44348): Powering off VM.
2026-04-29 04:30:49 (44348): Successfully stopped VM.
2026-04-29 04:30:49 (44348): Deregistering VM. (boinc_992eb475c138833d, slot#1)
2026-04-29 04:30:50 (44348): Removing network bandwidth throttle group from VM.
2026-04-29 04:30:50 (44348): Removing VM from VirtualBox.
2026-04-29 04:30:55 (44348): called boinc_finish(0)

</stderr_txt>
]]>

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