Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:45:04 (3207452): wrapper (7.7.26015): starting
17:45:04 (3207452): wrapper: running run_atlas (--nthreads 12)
[2026-04-29 17:45:04] Arguments: --nthreads 12
[2026-04-29 17:45:04] Threads: 12
[2026-04-29 17:45:04] Checking for CVMFS
[2026-04-29 17:45:04] No cvmfs_config command found, will try listing directly
[2026-04-29 17:45:04] CVMFS is ok
[2026-04-29 17:45:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 17:45:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 17:45:04] Further information can be found at the LHC@home message board.
[2026-04-29 17:45:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 17:45:04] Checking for apptainer binary...
[2026-04-29 17:45:04] which: no apptainer in ((null))
[2026-04-29 17:45:04] apptainer is not installed, using version from CVMFS
[2026-04-29 17:45:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 17:45:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-04-29 17:45:05] apptainer works
[2026-04-29 17:45:05] Set ATHENA_PROC_NUMBER=12
[2026-04-29 17:45:05] Set ATHENA_CORE_NUMBER=12
[2026-04-29 17:45:05] Starting ATLAS job with PandaID=7116463842
[2026-04-29 17:45:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 18:29:26]  *** The last 200 lines of the pilot log: ***
[2026-04-29 18:29:26]  direct_access_lan=False
[2026-04-29 18:29:26]  direct_access_wan=False
[2026-04-29 18:29:26]  domain=
[2026-04-29 18:29:26]  filesize=332751
[2026-04-29 18:29:26]  filetype=log
[2026-04-29 18:29:26]  guid=9d307f15-37f1-429d-ba16-a8058ae976f5
[2026-04-29 18:29:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-29 18:29:26]  is_altstaged=None
[2026-04-29 18:29:26]  is_tar=False
[2026-04-29 18:29:26]  lfn=log.49863851._001110.job.log.tgz.1
[2026-04-29 18:29:26]  mtime=0
[2026-04-29 18:29:26]  protocol_id=None
[2026-04-29 18:29:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-29 18:29:26]  replicas=None
[2026-04-29 18:29:26]  scope=mc23_13p6TeV
[2026-04-29 18:29:26]  status=None
[2026-04-29 18:29:26]  status_code=0
[2026-04-29 18:29:26]  storage_token=
[2026-04-29 18:29:26]  surl=/var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7116463842/log.49863851._001110.job.log.tgz.1
[2026-04-29 18:29:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/f1/log.49863851._001110.job.log.tgz.1
[2026-04-29 18:29:26]  workdir=None
[2026-04-29 18:29:26] ]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,588 | INFO     | transferring file log.49863851._001110.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7116463842/log.49863851._001110.job.log.tgz.1 to /var/lib/
[2026-04-29 18:29:26] 2026-04-29 16:28:52,588 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7116463842/log.49863851._001110.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/1/
[2026-04-29 18:29:26] 2026-04-29 16:28:52,600 | INFO     | adding to output.list: log.49863851._001110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/f1/log.49863851._001110.job.log.tg
[2026-04-29 18:29:26] 2026-04-29 16:28:52,601 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-29 18:29:26] 2026-04-29 16:28:52,601 | INFO     | summary of transferred files:
[2026-04-29 18:29:26] 2026-04-29 16:28:52,601 | INFO     |  -- lfn=log.49863851._001110.job.log.tgz.1, status_code=0, status=transferred
[2026-04-29 18:29:26] 2026-04-29 16:28:52,601 | INFO     | stage-out finished correctly
[2026-04-29 18:29:26] 2026-04-29 16:28:52,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-29 18:29:26] 2026-04-29 16:28:52,698 | INFO     | job 7116463842 has state=finished
[2026-04-29 18:29:26] 2026-04-29 16:28:52,699 | INFO     | preparing for final server update for job 7116463842 in state='finished'
[2026-04-29 18:29:26] 2026-04-29 16:28:52,699 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7116463842/jobReport.json
[2026-04-29 18:29:26] 2026-04-29 16:28:52,701 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/1/workernode_map.json
[2026-04-29 18:29:26] 2026-04-29 16:28:52,701 | INFO     | this job has now completed (state=finished)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,701 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,701 | INFO     | log transfer has been attempted: DONE
[2026-04-29 18:29:26] 2026-04-29 16:28:52,701 | INFO     | job 7116463842 has finished - writing final server update
[2026-04-29 18:29:26] 2026-04-29 16:28:52,702 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1144116/.job.ad'
[2026-04-29 18:29:26] 2026-04-29 16:28:52,702 | INFO     | total number of processed events: 400 (read)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,719 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7116463842/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,720 | INFO     | extracted standard info from prmon json
[2026-04-29 18:29:26] 2026-04-29 16:28:52,720 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 18:29:26] 2026-04-29 16:28:52,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 18:29:26] 2026-04-29 16:28:52,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | fitting pss+swap vs Time
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | sum of square deviations: 14456085.0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | sum of deviations: 73754856.0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | mean x (centered): 0.0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | mean y: 2724300.5
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | intersect: 2724300.5
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | chi2: 0.0005103166012705624
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | current memory leak: 5.10 B/s (using 36 data points, chi2=0.00)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | could have reported an average CPU frequency of 3599 MHz (5 samples)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | ..............................
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . Timing measurements:
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . get job = 0 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . initial setup = 4 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . payload setup = 6 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . stage-in = 0 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . payload execution = 2593 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . stage-out = 0 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | . log creation = 0 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,721 | INFO     | ..............................
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | 
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | job summary report
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | --------------------------------------------------
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | PanDA job id: 7116463842
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | task id: 49863851
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | errors: (none)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | pilot state: finished 
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | transexitcode: 0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | exeerrorcode: 0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | exeerrordiag: 
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | exitcode: 0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | exitmsg: OK
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | cpuconsumptiontime: 28340 s
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | nevents: 400
[2026-04-29 18:29:26] 2026-04-29 16:28:52,771 | INFO     | neventsw: 0
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | pid: 3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | pgrp: 3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | corecount: 12
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | event service: False
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | sizes: {0: 2282549, 11: 2282549, 2603: 2307786, 2604: 2317033}
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | --------------------------------------------------
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | 
[2026-04-29 18:29:26] 2026-04-29 16:28:52,772 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/1
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | job 7116463842 has completed (purged errors)
[2026-04-29 18:29:26] 2026-04-29 16:28:52,790 | INFO     | overall cleanup function is called
[2026-04-29 18:29:26] 2026-04-29 16:28:53,796 | INFO     | --- collectZombieJob: --- 10, [3223395]
[2026-04-29 18:29:26] 2026-04-29 16:28:53,796 | INFO     | zombie collector waiting for pid 3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:53,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 18:29:26] 2026-04-29 16:28:53,796 | INFO     | collected zombie processes
[2026-04-29 18:29:26] 2026-04-29 16:28:53,796 | INFO     | will attempt to kill all subprocesses of pid=3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:54,301 | INFO     | PID=3217432 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-29 18:29:26] 2026-04-29 16:28:54,302 | INFO     | .. there are 17 such processes running
[2026-04-29 18:29:26] 2026-04-29 16:28:54,378 | INFO     | process IDs to be killed: [3223395] (in reverse order)
[2026-04-29 18:29:26] 2026-04-29 16:28:54,537 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 18:29:26] 2026-04-29 16:28:54,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 18:29:26] 2026-04-29 16:28:54,559 | INFO     | did not find any defunct processes belonging to 3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:54,580 | INFO     | did not find any defunct processes belonging to 3223395
[2026-04-29 18:29:26] 2026-04-29 16:28:54,581 | INFO     | Ready for new job
[2026-04-29 18:29:26] 2026-04-29 16:28:54,582 | INFO     | ***************************************
[2026-04-29 18:29:26] 2026-04-29 16:28:54,582 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 18:29:26] 2026-04-29 16:28:54,582 | INFO     | ***************************************
[2026-04-29 18:29:26] 2026-04-29 16:28:54,582 | INFO     | 
[2026-04-29 18:29:26] 2026-04-29 16:28:54,587 | INFO     | architecture information:
[2026-04-29 18:29:26] 2026-04-29 16:28:54,588 | INFO     | executing command: cat /etc/os-release
[2026-04-29 18:29:26] 2026-04-29 16:28:54,600 | INFO     | cat /etc/os-release:
[2026-04-29 18:29:26] NAME="CentOS Linux"
[2026-04-29 18:29:26] VERSION="7 (Core)"
[2026-04-29 18:29:26] ID="centos"
[2026-04-29 18:29:26] ID_LIKE="rhel fedora"
[2026-04-29 18:29:26] VERSION_ID="7"
[2026-04-29 18:29:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 18:29:26] ANSI_COLOR="0;31"
[2026-04-29 18:29:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 18:29:26] HOME_URL="https://www.centos.org/"
[2026-04-29 18:29:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 18:29:26] 
[2026-04-29 18:29:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 18:29:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 18:29:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 18:29:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 18:29:26] 
[2026-04-29 18:29:26] 2026-04-29 16:28:54,601 | INFO     | ***************************************
[2026-04-29 18:29:26] 2026-04-29 16:28:55,104 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-04-29 18:29:26] 2026-04-29 16:28:55,115 | INFO     | sufficient remaining disk space (55657365504 B)
[2026-04-29 18:29:26] 2026-04-29 16:28:55,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 18:29:26] 2026-04-29 16:28:55,115 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 18:29:26] 2026-04-29 16:28:55,115 | INFO     | update_server=False
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 18:29:26] 2026-04-29 16:28:55,116 | INFO     | aborting loop
[2026-04-29 18:29:26] 2026-04-29 16:28:55,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 18:29:26] 2026-04-29 16:28:55,744 | INFO     | all data control threads have been joined
[2026-04-29 18:29:26] 2026-04-29 16:28:55,834 | INFO     | all job control threads have been joined
[2026-04-29 18:29:26] 2026-04-29 16:28:56,121 | INFO     | [job] retrieve thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,121 | INFO     | [job] job monitor thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,351 | INFO     | all payload control threads have been joined
[2026-04-29 18:29:26] 2026-04-29 16:28:56,747 | INFO     | [data] control thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,840 | INFO     | [job] control thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,894 | INFO     | [job] validate thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,991 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:56,991 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,031 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,088 | INFO     | [payload] failed_post thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,153 | INFO     | job.realtimelogging is not enabled
[2026-04-29 18:29:26] 2026-04-29 16:28:57,285 | INFO     | [data] copytool_in thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,357 | INFO     | [payload] control thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,660 | INFO     | [data] copytool_out thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,717 | INFO     | [payload] validate_post thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:57,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 18:29:26] 2026-04-29 16:28:58,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:58,786 | INFO     | [job] queue monitor thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:28:59,121 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 18:29:26] 2026-04-29 16:29:20,944 | INFO     | [monitor] cgroup control has ended
[2026-04-29 18:29:26] 2026-04-29 16:29:20,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23216655791936)>', '<ExcThread(monitor, started 23216355518208)>']
[2026-04-29 18:29:26] 2026-04-29 16:29:21,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 18:29:26] 2026-04-29 16:29:21,254 | INFO     | [monitor] control thread has ended
[2026-04-29 18:29:26] 2026-04-29 16:29:26,005 | INFO     | all workflow threads have been joined
[2026-04-29 18:29:26] 2026-04-29 16:29:26,006 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 18:29:26] 2026-04-29 16:29:26,006 | INFO     | traces error code: 0
[2026-04-29 18:29:26] 2026-04-29 16:29:26,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 18:29:26] 2026-04-29 16:29:26,127 [wrapper] ==== pilot stdout END ====
[2026-04-29 18:29:26] 2026-04-29 16:29:26,130 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 18:29:26] 2026-04-29 16:29:26,131 [wrapper] pilotpid: 3217432
[2026-04-29 18:29:26] 2026-04-29 16:29:26,134 [wrapper] Pilot exit status: 0
[2026-04-29 18:29:26] 2026-04-29 16:29:26,140 [wrapper] pandaids: 7116463842
[2026-04-29 18:29:26] 2026-04-29 16:29:26,251 [wrapper] cleanup supervisor_pilot 3461701 3217433
[2026-04-29 18:29:26] 2026-04-29 16:29:26,253 [wrapper] Test setup, not cleaning
[2026-04-29 18:29:26] 2026-04-29 16:29:26,255 [wrapper] apfmon messages muted
[2026-04-29 18:29:26] 2026-04-29 16:29:26,257 [wrapper] ==== wrapper stdout END ====
[2026-04-29 18:29:26] 2026-04-29 16:29:26,259 [wrapper] ==== wrapper stderr END ====
[2026-04-29 18:29:26]  *** Error codes and diagnostics ***
[2026-04-29 18:29:26]     "exeErrorCode": 0,
[2026-04-29 18:29:26]     "pilotErrorCode": 0,
[2026-04-29 18:29:26]  *** Listing of results directory ***
[2026-04-29 18:29:26] total 477620
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc    683926 Apr 28 12:25 pilot3.tar.gz
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc      5631 Apr 28 12:57 queuedata.json
[2026-04-29 18:29:26] -rwx------. 1 boinc boinc     36322 Apr 28 12:57 runpilot2-wrapper.sh
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc       100 Apr 29 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 18:29:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 17:44 run_atlas
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc       105 Apr 29 17:44 job.xml
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc 260042638 Apr 29 17:45 EVNT.49863848._000045.pool.root.1
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc     15667 Apr 29 17:45 start_atlas.sh
[2026-04-29 18:29:26] drwxrwx--x. 2 boinc boinc      4096 Apr 29 17:45 shared
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc    697435 Apr 29 17:45 input.tar.gz
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc      6630 Apr 29 17:45 init_data.xml
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc         0 Apr 29 17:45 boinc_lockfile
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc      2649 Apr 29 17:45 pandaJob.out
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc   1001893 Apr 29 17:45 agis_schedconf.cvmfs.json
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc   1512704 Apr 29 17:45 agis_ddmendpoints.agis.ALL.json
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc       445 Apr 29 17:45 workernode_map.json
[2026-04-29 18:29:26] drwx------. 5 boinc boinc      4096 Apr 29 17:45 pilot3
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc        95 Apr 29 18:28 pilot_heartbeat.json
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc       487 Apr 29 18:28 boinc_task_state.xml
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc 223658441 Apr 29 18:28 HITS.49863851._001110.pool.root.1
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc      1031 Apr 29 18:28 memory_monitor_summary.json
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc    332751 Apr 29 18:28 log.49863851._001110.job.log.tgz.1
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc      6375 Apr 29 18:28 heartbeat_new.json
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc      6266 Apr 29 18:28 heartbeat.json
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc        27 Apr 29 18:29 wrapper_checkpoint.txt
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc      8192 Apr 29 18:29 boinc_mmap_file
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc      4633 Apr 29 18:29 pilotlog.txt
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc    289094 Apr 29 18:29 log.49863851._001110.job.log.1
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc       357 Apr 29 18:29 output.list
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc       410 Apr 29 18:29 runtime_log
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc    634880 Apr 29 18:29 result.tar.gz
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc      8846 Apr 29 18:29 runtime_log.err
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc       662 Apr 29 18:29 928f5a250e87.diag
[2026-04-29 18:29:26] -rw-r--r--. 1 boinc boinc     20727 Apr 29 18:29 stderr.txt
[2026-04-29 18:29:26] HITS file was successfully produced:
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc 223658441 Apr 29 18:28 shared/HITS.pool.root.1
[2026-04-29 18:29:26]  *** Contents of shared directory: ***
[2026-04-29 18:29:26] total 473696
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc 260042638 Apr 29 17:45 ATLAS.root_0
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc     15667 Apr 29 17:45 start_atlas.sh
[2026-04-29 18:29:26] -rw-r--r--. 2 boinc boinc    697435 Apr 29 17:45 input.tar.gz
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc 223658441 Apr 29 18:28 HITS.pool.root.1
[2026-04-29 18:29:26] -rw-------. 1 boinc boinc    634880 Apr 29 18:29 result.tar.gz
18:29:27 (3207452): run_atlas exited; CPU time 28407.991096
18:29:27 (3207452): called boinc_finish(0)

</stderr_txt>
]]>

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