Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:43:49 (5118): wrapper (7.7.26015): starting
09:43:49 (5118): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 09:43:49] Arguments: --nthreads 8
[2026-04-28 09:43:49] Threads: 8
[2026-04-28 09:43:49] Checking for CVMFS
[2026-04-28 09:43:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 09:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 09:43:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 09:43:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 09:43:53] 2.11.2.0 2818 63233 74980 158968 1 49 20184757 20275201 1 130560 0 11768964 99.931 2421106 20833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-28 09:43:53] CVMFS is ok
[2026-04-28 09:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 09:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 09:43:53] Further information can be found at the LHC@home message board.
[2026-04-28 09:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 09:43:53] Checking for apptainer binary...
[2026-04-28 09:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 09:43:53] Running /usr/bin/apptainer --version
[2026-04-28 09:43:53] apptainer version 1.3.2-1.el7
[2026-04-28 09:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 09:43:55] c-204-10.aglt2.org
[2026-04-28 09:43:55] apptainer works
[2026-04-28 09:43:55] Set ATHENA_PROC_NUMBER=8
[2026-04-28 09:43:55] Set ATHENA_CORE_NUMBER=8
[2026-04-28 09:43:55] Starting ATLAS job with PandaID=7116401726
[2026-04-28 09:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 13:30:09]  *** The last 200 lines of the pilot log: ***
[2026-04-28 13:30:09] 2026-04-28 17:29:35,703 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 13:30:09] 2026-04-28 17:29:35,703 | INFO     | summary of transferred files:
[2026-04-28 13:30:09] 2026-04-28 17:29:35,704 | INFO     |  -- lfn=log.49820375._019383.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 13:30:09] 2026-04-28 17:29:35,704 | INFO     | stage-out finished correctly
[2026-04-28 13:30:09] 2026-04-28 17:29:35,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 13:30:09] 2026-04-28 17:29:36,478 | INFO     | job 7116401726 has state=finished
[2026-04-28 13:30:09] 2026-04-28 17:29:36,478 | INFO     | preparing for final server update for job 7116401726 in state='finished'
[2026-04-28 13:30:09] 2026-04-28 17:29:36,478 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7116401726/jobReport.json
[2026-04-28 13:30:09] 2026-04-28 17:29:36,482 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-28 13:30:09] 2026-04-28 17:29:36,483 | INFO     | this job has now completed (state=finished)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,483 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,483 | INFO     | log transfer has been attempted: DONE
[2026-04-28 13:30:09] 2026-04-28 17:29:36,483 | INFO     | job 7116401726 has finished - writing final server update
[2026-04-28 13:30:09] 2026-04-28 17:29:36,484 | INFO     | total number of processed events: 400 (read)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7116401726/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,486 | INFO     | extracted standard info from prmon json
[2026-04-28 13:30:09] 2026-04-28 17:29:36,486 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 13:30:09] 2026-04-28 17:29:36,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 13:30:09] 2026-04-28 17:29:36,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 13:30:09] 2026-04-28 17:29:36,490 | INFO     | fitting pss+swap vs Time
[2026-04-28 13:30:09] 2026-04-28 17:29:36,491 | INFO     | sum of square deviations: 3346927870.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,492 | INFO     | sum of deviations: 26133745721.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,492 | INFO     | mean x (centered): 0.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,492 | INFO     | mean y: 2546262.2398190047
[2026-04-28 13:30:09] 2026-04-28 17:29:36,493 | INFO     | intersect: 2546262.2398190047
[2026-04-28 13:30:09] 2026-04-28 17:29:36,493 | INFO     | chi2: 1.5630232987880515
[2026-04-28 13:30:09] 2026-04-28 17:29:36,493 | INFO     | sum of square deviations: 3124858590.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,495 | INFO     | sum of deviations: 25235162162.999996
[2026-04-28 13:30:09] 2026-04-28 17:29:36,495 | INFO     | mean x (centered): 0.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,495 | INFO     | mean y: 2545645.203703704
[2026-04-28 13:30:09] 2026-04-28 17:29:36,495 | INFO     | intersect: 2545645.203703704
[2026-04-28 13:30:09] 2026-04-28 17:29:36,496 | INFO     | chi2: 1.5639074517175164
[2026-04-28 13:30:09] 2026-04-28 17:29:36,496 | INFO     | current chi2=1.5639074517175164 (change=-0.056566842615240434 %)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,496 | INFO     | right removable region: 215
[2026-04-28 13:30:09] 2026-04-28 17:29:36,496 | INFO     | sum of square deviations: 3124858590.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,498 | INFO     | sum of deviations: -8281363690.499999
[2026-04-28 13:30:09] 2026-04-28 17:29:36,498 | INFO     | mean x (centered): 0.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,498 | INFO     | mean y: 2569651.449074074
[2026-04-28 13:30:09] 2026-04-28 17:29:36,498 | INFO     | intersect: 2569651.449074074
[2026-04-28 13:30:09] 2026-04-28 17:29:36,499 | INFO     | chi2: 0.11157240207437653
[2026-04-28 13:30:09] 2026-04-28 17:29:36,499 | INFO     | current chi2=0.11157240207437653 (change=92.8617569449612 %)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,499 | INFO     | sum of square deviations: 2912836010.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,501 | INFO     | sum of deviations: -6966841659.000002
[2026-04-28 13:30:09] 2026-04-28 17:29:36,501 | INFO     | mean x (centered): 0.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,501 | INFO     | mean y: 2568663.952606635
[2026-04-28 13:30:09] 2026-04-28 17:29:36,501 | INFO     | intersect: 2568663.952606635
[2026-04-28 13:30:09] 2026-04-28 17:29:36,501 | INFO     | chi2: 0.09422489259075223
[2026-04-28 13:30:09] 2026-04-28 17:29:36,502 | INFO     | current chi2=0.09422489259075223 (change=15.548208303393956 %)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,502 | INFO     | left removable region: 10
[2026-04-28 13:30:09] 2026-04-28 17:29:36,502 | INFO     | sum of square deviations: 2671343110.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,503 | INFO     | sum of deviations: -7128135236.000001
[2026-04-28 13:30:09] 2026-04-28 17:29:36,503 | INFO     | mean x (centered): 0.0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,504 | INFO     | mean y: 2568541.912195122
[2026-04-28 13:30:09] 2026-04-28 17:29:36,504 | INFO     | intersect: 2568541.912195122
[2026-04-28 13:30:09] 2026-04-28 17:29:36,504 | INFO     | chi2: 0.09379021493106776
[2026-04-28 13:30:09] 2026-04-28 17:29:36,504 | INFO     | current memory leak: -2.67 B/s (using 205 data points, chi2=0.09)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | could have reported an average CPU frequency of 1679 MHz (11 samples)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | ..............................
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | . Timing measurements:
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | . get job = 0 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | . initial setup = 8 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | . payload setup = 18 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,505 | INFO     | . stage-in = 0 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,506 | INFO     | . payload execution = 13477 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,506 | INFO     | . stage-out = 2 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,506 | INFO     | . log creation = 0 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,506 | INFO     | ..............................
[2026-04-28 13:30:09] 2026-04-28 17:29:36,595 | INFO     | 
[2026-04-28 13:30:09] 2026-04-28 17:29:36,595 | INFO     | job summary report
[2026-04-28 13:30:09] 2026-04-28 17:29:36,595 | INFO     | --------------------------------------------------
[2026-04-28 13:30:09] 2026-04-28 17:29:36,595 | INFO     | PanDA job id: 7116401726
[2026-04-28 13:30:09] 2026-04-28 17:29:36,595 | INFO     | task id: 49820375
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | errors: (none)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | pilot state: finished 
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | transexitcode: 0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | exeerrorcode: 0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,596 | INFO     | exeerrordiag: 
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | exitcode: 0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | exitmsg: OK
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | cpuconsumptiontime: 103089 s
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | nevents: 400
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | neventsw: 0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,597 | INFO     | pid: 13646
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | pgrp: 13646
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | corecount: 8
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | event service: False
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | sizes: {0: 2282512, 11: 2282512, 13499: 2312848, 13502: 2321902, 13503: 2322040}
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | --------------------------------------------------
[2026-04-28 13:30:09] 2026-04-28 17:29:36,598 | INFO     | 
[2026-04-28 13:30:09] 2026-04-28 17:29:36,599 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-28 13:30:09] 2026-04-28 17:29:36,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 13:30:09] 2026-04-28 17:29:36,632 | INFO     | job 7116401726 has completed (purged errors)
[2026-04-28 13:30:09] 2026-04-28 17:29:36,632 | INFO     | overall cleanup function is called
[2026-04-28 13:30:09] 2026-04-28 17:29:37,640 | INFO     | --- collectZombieJob: --- 10, [13646]
[2026-04-28 13:30:09] 2026-04-28 17:29:37,641 | INFO     | zombie collector waiting for pid 13646
[2026-04-28 13:30:09] 2026-04-28 17:29:37,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 13:30:09] 2026-04-28 17:29:37,641 | INFO     | collected zombie processes
[2026-04-28 13:30:09] 2026-04-28 17:29:37,641 | INFO     | will attempt to kill all subprocesses of pid=13646
[2026-04-28 13:30:09] 2026-04-28 17:29:37,713 | INFO     | process IDs to be killed: [13646] (in reverse order)
[2026-04-28 13:30:09] 2026-04-28 17:29:37,772 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 13:30:09] 2026-04-28 17:29:37,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 13:30:09] 2026-04-28 17:29:37,776 | INFO     | did not find any defunct processes belonging to 13646
[2026-04-28 13:30:09] 2026-04-28 17:29:37,780 | INFO     | did not find any defunct processes belonging to 13646
[2026-04-28 13:30:09] 2026-04-28 17:29:37,780 | INFO     | Ready for new job
[2026-04-28 13:30:09] 2026-04-28 17:29:37,782 | INFO     | ***************************************
[2026-04-28 13:30:09] 2026-04-28 17:29:37,782 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 13:30:09] 2026-04-28 17:29:37,783 | INFO     | ***************************************
[2026-04-28 13:30:09] 2026-04-28 17:29:37,783 | INFO     | 
[2026-04-28 13:30:09] 2026-04-28 17:29:37,783 | INFO     | architecture information:
[2026-04-28 13:30:09] 2026-04-28 17:29:37,784 | INFO     | executing command: cat /etc/os-release
[2026-04-28 13:30:09] 2026-04-28 17:29:37,802 | INFO     | cat /etc/os-release:
[2026-04-28 13:30:09] NAME="CentOS Linux"
[2026-04-28 13:30:09] VERSION="7 (Core)"
[2026-04-28 13:30:09] ID="centos"
[2026-04-28 13:30:09] ID_LIKE="rhel fedora"
[2026-04-28 13:30:09] VERSION_ID="7"
[2026-04-28 13:30:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 13:30:09] ANSI_COLOR="0;31"
[2026-04-28 13:30:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 13:30:09] HOME_URL="https://www.centos.org/"
[2026-04-28 13:30:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 13:30:09] 
[2026-04-28 13:30:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 13:30:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 13:30:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 13:30:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 13:30:09] 
[2026-04-28 13:30:09] 2026-04-28 17:29:37,802 | INFO     | ***************************************
[2026-04-28 13:30:09] 2026-04-28 17:29:38,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-28 13:30:09] 2026-04-28 17:29:38,326 | INFO     | sufficient remaining disk space (14416871424 B)
[2026-04-28 13:30:09] 2026-04-28 17:29:38,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 13:30:09] 2026-04-28 17:29:38,326 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 13:30:09] 2026-04-28 17:29:38,327 | INFO     | update_server=False
[2026-04-28 13:30:09] 2026-04-28 17:29:38,327 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 13:30:09] 2026-04-28 17:29:38,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 13:30:09] 2026-04-28 17:29:38,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 13:30:09] 2026-04-28 17:29:38,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 13:30:09] 2026-04-28 17:29:38,328 | INFO     | aborting loop
[2026-04-28 13:30:09] 2026-04-28 17:29:38,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 13:30:09] 2026-04-28 17:29:39,049 | INFO     | all job control threads have been joined
[2026-04-28 13:30:09] 2026-04-28 17:29:39,214 | INFO     | all data control threads have been joined
[2026-04-28 13:30:09] 2026-04-28 17:29:39,333 | INFO     | [job] retrieve thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:39,334 | INFO     | [job] queue monitor thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:39,335 | INFO     | [job] job monitor thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:39,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:39,433 | INFO     | all payload control threads have been joined
[2026-04-28 13:30:09] 2026-04-28 17:29:39,861 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,055 | INFO     | [job] control thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,055 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,087 | INFO     | [data] copytool_in thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,157 | INFO     | [payload] failed_post thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,217 | INFO     | [data] control thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,438 | INFO     | [payload] control thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,481 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,486 | INFO     | [job] validate thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,800 | INFO     | [payload] validate_post thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:40,807 | INFO     | [data] copytool_out thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:42,330 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 13:30:09] 2026-04-28 17:29:43,845 | INFO     | [monitor] cgroup control has ended
[2026-04-28 13:30:09] 2026-04-28 17:29:44,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932251215680)>', '<ExcThread(monitor, started 139931812869888)>']
[2026-04-28 13:30:09] 2026-04-28 17:29:49,427 | INFO     | all workflow threads have been joined
[2026-04-28 13:30:09] 2026-04-28 17:29:49,427 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 13:30:09] 2026-04-28 17:29:49,428 | INFO     | traces error code: 0
[2026-04-28 13:30:09] 2026-04-28 17:29:49,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 13:30:09] 2026-04-28 17:30:08,807 | INFO     | PID=9172 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-28 13:30:09] 2026-04-28 17:30:08,808 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 13:30:09] 2026-04-28 17:30:08,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 13:30:09] 2026-04-28 17:30:08,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 13:30:09] 2026-04-28 17:30:08,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 13:30:09] 2026-04-28 17:30:08,808 | INFO     | [monitor] control thread has ended
[2026-04-28 13:30:09] 2026-04-28 17:30:08,917 [wrapper] ==== pilot stdout END ====
[2026-04-28 13:30:09] 2026-04-28 17:30:08,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 13:30:09] 2026-04-28 17:30:08,926 [wrapper] pilotpid: 9172
[2026-04-28 13:30:09] 2026-04-28 17:30:08,931 [wrapper] Pilot exit status: 0
[2026-04-28 13:30:09] 2026-04-28 17:30:08,950 [wrapper] pandaids: 7116401726
[2026-04-28 13:30:09] 2026-04-28 17:30:08,992 [wrapper] cleanup supervisor_pilot 30857 9173
[2026-04-28 13:30:09] 2026-04-28 17:30:08,996 [wrapper] Test setup, not cleaning
[2026-04-28 13:30:09] 2026-04-28 17:30:09,001 [wrapper] apfmon messages muted
[2026-04-28 13:30:09] 2026-04-28 17:30:09,006 [wrapper] ==== wrapper stdout END ====
[2026-04-28 13:30:09] 2026-04-28 17:30:09,011 [wrapper] ==== wrapper stderr END ====
[2026-04-28 13:30:09]  *** Error codes and diagnostics ***
[2026-04-28 13:30:09]     "exeErrorCode": 0,
[2026-04-28 13:30:09]     "pilotErrorCode": 0,
[2026-04-28 13:30:09]  *** Listing of results directory ***
[2026-04-28 13:30:09] total 2465244
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas     683926 Apr 28 03:39 pilot3.tar.gz
[2026-04-28 13:30:09] -rwx------ 1 boincer umatlas      36322 Apr 28 03:53 runpilot2-wrapper.sh
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas       5631 Apr 28 03:53 queuedata.json
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas        100 Apr 28 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 13:30:09] -rwxr-xr-x 1 boincer umatlas       7986 Apr 28 09:43 run_atlas
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas        105 Apr 28 09:43 job.xml
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas 2239823717 Apr 28 09:43 EVNT.49820373._000066.pool.root.1
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas      15667 Apr 28 09:43 start_atlas.sh
[2026-04-28 13:30:09] drwxrwx--x 2 boincer umatlas       4096 Apr 28 09:43 shared
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas     697416 Apr 28 09:43 input.tar.gz
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas          0 Apr 28 09:43 boinc_lockfile
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas       2584 Apr 28 09:43 pandaJob.out
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas         57 Apr 28 09:43 setup.sh.local
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas     993626 Apr 28 09:44 agis_schedconf.cvmfs.json
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas        432 Apr 28 09:44 workernode_map.json
[2026-04-28 13:30:09] drwx------ 5 boincer umatlas       4096 Apr 28 09:44 pilot3
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas       5827 Apr 28 13:27 init_data.xml
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas  277257442 Apr 28 13:28 HITS.49820375._019383.pool.root.1
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas        490 Apr 28 13:29 boinc_task_state.xml
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas       1050 Apr 28 13:29 memory_monitor_summary.json
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas         95 Apr 28 13:29 pilot_heartbeat.json
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas    1512704 Apr 28 13:29 agis_ddmendpoints.agis.ALL.json
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas     377681 Apr 28 13:29 log.49820375._019383.job.log.tgz.1
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas       6426 Apr 28 13:29 heartbeat_new.json
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas       6317 Apr 28 13:29 heartbeat.json
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas       8192 Apr 28 13:30 boinc_mmap_file
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas         29 Apr 28 13:30 wrapper_checkpoint.txt
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas        744 Apr 28 13:30 pilotlog.txt
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas    1220495 Apr 28 13:30 log.49820375._019383.job.log.1
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas        357 Apr 28 13:30 output.list
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas        410 Apr 28 13:30 runtime_log
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas    1617920 Apr 28 13:30 result.tar.gz
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas       8965 Apr 28 13:30 runtime_log.err
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas        664 Apr 28 13:30 6778391eca36.diag
[2026-04-28 13:30:09] -rw-r--r-- 1 boincer umatlas      21197 Apr 28 13:30 stderr.txt
[2026-04-28 13:30:09] HITS file was successfully produced:
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas 277257442 Apr 28 13:28 shared/HITS.pool.root.1
[2026-04-28 13:30:09]  *** Contents of shared directory: ***
[2026-04-28 13:30:09] total 2460376
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas 2239823717 Apr 28 09:43 ATLAS.root_0
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas      15667 Apr 28 09:43 start_atlas.sh
[2026-04-28 13:30:09] -rw-r--r-- 2 boincer umatlas     697416 Apr 28 09:43 input.tar.gz
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas  277257442 Apr 28 13:28 HITS.pool.root.1
[2026-04-28 13:30:09] -rw------- 1 boincer umatlas    1617920 Apr 28 13:30 result.tar.gz
13:30:10 (5118): run_atlas exited; CPU time 103023.363247
13:30:10 (5118): called boinc_finish(0)

</stderr_txt>
]]>

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