Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:52 (3197308): wrapper (7.7.26015): starting
19:10:52 (3197308): wrapper: running run_atlas (--nthreads 4)
[2026-04-30 19:10:52] Arguments: --nthreads 4
[2026-04-30 19:10:52] Threads: 4
[2026-04-30 19:10:52] Checking for CVMFS
[2026-04-30 19:10:52] No cvmfs_config command found, will try listing directly
[2026-04-30 19:10:52] CVMFS is ok
[2026-04-30 19:10:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 19:10:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 19:10:52] Further information can be found at the LHC@home message board.
[2026-04-30 19:10:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 19:10:52] Checking for apptainer binary...
[2026-04-30 19:10:52] which: no apptainer in ((null))
[2026-04-30 19:10:52] apptainer is not installed, using version from CVMFS
[2026-04-30 19:10:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 19:10:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-30 19:10:52] apptainer works
[2026-04-30 19:10:52] Set ATHENA_PROC_NUMBER=4
[2026-04-30 19:10:52] Set ATHENA_CORE_NUMBER=4
[2026-04-30 19:10:52] Starting ATLAS job with PandaID=7116160495
[2026-04-30 19:10:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 22:38:42]  *** The last 200 lines of the pilot log: ***
[2026-04-30 22:38:42] 2026-04-30 20:37:39,185 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1886040/.job.ad'
[2026-04-30 22:38:42] 2026-04-30 20:37:39,185 | INFO     | total number of processed events: 400 (read)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,216 | INFO     | using path: /var/lib/boinc/var/slot36/slots/30/PanDA_Pilot-7116160495/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,217 | INFO     | extracted standard info from prmon json
[2026-04-30 22:38:42] 2026-04-30 20:37:39,217 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 22:38:42] 2026-04-30 20:37:39,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 22:38:42] 2026-04-30 20:37:39,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 22:38:42] 2026-04-30 20:37:39,221 | INFO     | fitting pss+swap vs Time
[2026-04-30 22:38:42] 2026-04-30 20:37:39,222 | INFO     | sum of square deviations: 2593916542.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,223 | INFO     | sum of deviations: 12437952582.000008
[2026-04-30 22:38:42] 2026-04-30 20:37:39,223 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,223 | INFO     | mean y: 2319451.433497537
[2026-04-30 22:38:42] 2026-04-30 20:37:39,223 | INFO     | intersect: 2319451.433497537
[2026-04-30 22:38:42] 2026-04-30 20:37:39,224 | INFO     | chi2: 2.1736095677450695
[2026-04-30 22:38:42] 2026-04-30 20:37:39,224 | INFO     | sum of square deviations: 2406926989.5
[2026-04-30 22:38:42] 2026-04-30 20:37:39,225 | INFO     | sum of deviations: 24510276989.499996
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | mean y: 2329092.1464646463
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | intersect: 2329092.1464646463
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | chi2: 1.4019403379699038
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | current chi2=1.4019403379699038 (change=35.501740571362376 %)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,226 | INFO     | sum of square deviations: 2229146912.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | sum of deviations: 23776318371.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | mean y: 2328462.4300518134
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | intersect: 2328462.4300518134
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | chi2: 1.4028136438304029
[2026-04-30 22:38:42] 2026-04-30 20:37:39,228 | INFO     | current chi2=1.4028136438304029 (change=-0.06229265517558705 %)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,231 | INFO     | right removable region: 192
[2026-04-30 22:38:42] 2026-04-30 20:37:39,231 | INFO     | sum of square deviations: 2406926989.5
[2026-04-30 22:38:42] 2026-04-30 20:37:39,232 | INFO     | sum of deviations: -14925509585.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,233 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,233 | INFO     | mean y: 2341501.6363636362
[2026-04-30 22:38:42] 2026-04-30 20:37:39,233 | INFO     | intersect: 2341501.6363636362
[2026-04-30 22:38:42] 2026-04-30 20:37:39,233 | INFO     | chi2: 0.7970800971688526
[2026-04-30 22:38:42] 2026-04-30 20:37:39,233 | INFO     | current chi2=0.7970800971688526 (change=63.32919632867857 %)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,234 | INFO     | sum of square deviations: 2229146912.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,235 | INFO     | sum of deviations: -15230198119.000002
[2026-04-30 22:38:42] 2026-04-30 20:37:39,235 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,235 | INFO     | mean y: 2341758.378238342
[2026-04-30 22:38:42] 2026-04-30 20:37:39,235 | INFO     | intersect: 2341758.378238342
[2026-04-30 22:38:42] 2026-04-30 20:37:39,236 | INFO     | chi2: 0.7964574134814131
[2026-04-30 22:38:42] 2026-04-30 20:37:39,236 | INFO     | current chi2=0.7964574134814131 (change=0.07812059160067747 %)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,236 | INFO     | left removable region: 10
[2026-04-30 22:38:42] 2026-04-30 20:37:39,236 | INFO     | sum of square deviations: 1869302025.5
[2026-04-30 22:38:42] 2026-04-30 20:37:39,237 | INFO     | sum of deviations: -3114073942.5
[2026-04-30 22:38:42] 2026-04-30 20:37:39,237 | INFO     | mean x (centered): 0.0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,237 | INFO     | mean y: 2352475.9065934066
[2026-04-30 22:38:42] 2026-04-30 20:37:39,238 | INFO     | intersect: 2352475.9065934066
[2026-04-30 22:38:42] 2026-04-30 20:37:39,238 | INFO     | chi2: 0.004561292586547624
[2026-04-30 22:38:42] 2026-04-30 20:37:39,238 | INFO     | current memory leak: -1.67 B/s (using 182 data points, chi2=0.00)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | could have reported an average CPU frequency of 2784 MHz (10 samples)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | ..............................
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . Timing measurements:
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . get job = 0 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . initial setup = 8 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . payload setup = 15 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . stage-in = 0 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,239 | INFO     | . payload execution = 12349 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,240 | INFO     | . stage-out = 1 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,240 | INFO     | . log creation = 0 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,240 | INFO     | ..............................
[2026-04-30 22:38:42] 2026-04-30 20:37:39,332 | INFO     | 
[2026-04-30 22:38:42] 2026-04-30 20:37:39,332 | INFO     | job summary report
[2026-04-30 22:38:42] 2026-04-30 20:37:39,332 | INFO     | --------------------------------------------------
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | PanDA job id: 7116160495
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | task id: 49863733
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | errors: (none)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | pilot state: finished 
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | transexitcode: 0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | exeerrorcode: 0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | exeerrordiag: 
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | exitcode: 0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,333 | INFO     | exitmsg: OK
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | cpuconsumptiontime: 48279 s
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | nevents: 400
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | neventsw: 0
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | pid: 3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | pgrp: 3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | corecount: 4
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | event service: False
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | sizes: {0: 2276540, 1: 2278369, 11: 2278369, 12369: 2308475, 12370: 2317497, 12371: 2317553, 12373: 2317875}
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | --------------------------------------------------
[2026-04-30 22:38:42] 2026-04-30 20:37:39,334 | INFO     | 
[2026-04-30 22:38:42] 2026-04-30 20:37:39,335 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/30
[2026-04-30 22:38:42] 2026-04-30 20:37:39,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 22:38:42] 2026-04-30 20:37:39,369 | INFO     | job 7116160495 has completed (purged errors)
[2026-04-30 22:38:42] 2026-04-30 20:37:39,369 | INFO     | overall cleanup function is called
[2026-04-30 22:38:42] 2026-04-30 20:37:40,378 | INFO     | --- collectZombieJob: --- 10, [3206622]
[2026-04-30 22:38:42] 2026-04-30 20:37:40,378 | INFO     | zombie collector waiting for pid 3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:40,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 22:38:42] 2026-04-30 20:37:40,379 | INFO     | collected zombie processes
[2026-04-30 22:38:42] 2026-04-30 20:37:40,379 | INFO     | will attempt to kill all subprocesses of pid=3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:42,267 | INFO     | PID=3201397 has CPU usage=19.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-30 22:38:42] 2026-04-30 20:37:42,268 | INFO     | .. there are 27 such processes running
[2026-04-30 22:38:42] 2026-04-30 20:37:42,356 | INFO     | process IDs to be killed: [3206622] (in reverse order)
[2026-04-30 22:38:42] 2026-04-30 20:37:42,659 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 22:38:42] 2026-04-30 20:37:42,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 22:38:42] 2026-04-30 20:37:42,685 | INFO     | did not find any defunct processes belonging to 3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:42,709 | INFO     | did not find any defunct processes belonging to 3206622
[2026-04-30 22:38:42] 2026-04-30 20:37:42,709 | INFO     | Ready for new job
[2026-04-30 22:38:42] 2026-04-30 20:37:42,711 | INFO     | ***************************************
[2026-04-30 22:38:42] 2026-04-30 20:37:42,712 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 22:38:42] 2026-04-30 20:37:42,712 | INFO     | ***************************************
[2026-04-30 22:38:42] 2026-04-30 20:37:42,712 | INFO     | 
[2026-04-30 22:38:42] 2026-04-30 20:37:42,720 | INFO     | architecture information:
[2026-04-30 22:38:42] 2026-04-30 20:37:42,721 | INFO     | executing command: cat /etc/os-release
[2026-04-30 22:38:42] 2026-04-30 20:37:42,744 | INFO     | cat /etc/os-release:
[2026-04-30 22:38:42] NAME="CentOS Linux"
[2026-04-30 22:38:42] VERSION="7 (Core)"
[2026-04-30 22:38:42] ID="centos"
[2026-04-30 22:38:42] ID_LIKE="rhel fedora"
[2026-04-30 22:38:42] VERSION_ID="7"
[2026-04-30 22:38:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 22:38:42] ANSI_COLOR="0;31"
[2026-04-30 22:38:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 22:38:42] HOME_URL="https://www.centos.org/"
[2026-04-30 22:38:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 22:38:42] 
[2026-04-30 22:38:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 22:38:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 22:38:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 22:38:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 22:38:42] 
[2026-04-30 22:38:42] 2026-04-30 20:37:42,744 | INFO     | ***************************************
[2026-04-30 22:38:42] 2026-04-30 20:37:43,247 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/30
[2026-04-30 22:38:42] 2026-04-30 20:37:43,271 | INFO     | sufficient remaining disk space (70224183296 B)
[2026-04-30 22:38:42] 2026-04-30 20:37:43,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 22:38:42] 2026-04-30 20:37:43,272 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 22:38:42] 2026-04-30 20:37:43,272 | INFO     | update_server=False
[2026-04-30 22:38:42] 2026-04-30 20:37:43,272 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 22:38:42] 2026-04-30 20:37:43,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 22:38:42] 2026-04-30 20:37:43,322 | INFO     | all job control threads have been joined
[2026-04-30 22:38:42] 2026-04-30 20:37:43,476 | INFO     | all data control threads have been joined
[2026-04-30 22:38:42] 2026-04-30 20:37:43,586 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 22:38:42] 2026-04-30 20:37:43,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 22:38:42] 2026-04-30 20:37:43,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 22:38:42] 2026-04-30 20:37:43,586 | INFO     | will abort loop
[2026-04-30 22:38:42] 2026-04-30 20:37:44,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 22:38:42] 2026-04-30 20:37:44,277 | INFO     | [job] retrieve thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,327 | INFO     | [job] control thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 22:38:42] 2026-04-30 20:37:44,404 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,481 | INFO     | [data] control thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,551 | INFO     | [payload] failed_post thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,571 | INFO     | all payload control threads have been joined
[2026-04-30 22:38:42] 2026-04-30 20:37:44,591 | INFO     | [job] job monitor thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:44,912 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,025 | INFO     | [job] validate thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,100 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,348 | INFO     | [job] queue monitor thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,438 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,577 | INFO     | [payload] control thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,627 | INFO     | [payload] validate_post thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:45,721 | INFO     | [data] copytool_in thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:46,151 | INFO     | [data] copytool_out thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:37:47,278 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 22:38:42] 2026-04-30 20:38:15,169 | INFO     | PID=3201397 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 22:38:42] 2026-04-30 20:38:15,170 | INFO     | .. there are 27 such processes running
[2026-04-30 22:38:42] 2026-04-30 20:38:15,171 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 22:38:42] 2026-04-30 20:38:15,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 22:38:42] 2026-04-30 20:38:15,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 22:38:42] 2026-04-30 20:38:34,560 | INFO     | [monitor] cgroup control has ended
[2026-04-30 22:38:42] 2026-04-30 20:38:36,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22525481682752)>', '<ExcThread(monitor, started 22525232006912)>']
[2026-04-30 22:38:42] 2026-04-30 20:38:37,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 22:38:42] 2026-04-30 20:38:37,282 | INFO     | [monitor] control thread has ended
[2026-04-30 22:38:42] 2026-04-30 20:38:41,540 | INFO     | all workflow threads have been joined
[2026-04-30 22:38:42] 2026-04-30 20:38:41,540 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 22:38:42] 2026-04-30 20:38:41,540 | INFO     | traces error code: 0
[2026-04-30 22:38:42] 2026-04-30 20:38:41,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 22:38:42] 2026-04-30 20:38:41,690 [wrapper] ==== pilot stdout END ====
[2026-04-30 22:38:42] 2026-04-30 20:38:41,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 22:38:42] 2026-04-30 20:38:41,699 [wrapper] pilotpid: 3201397
[2026-04-30 22:38:42] 2026-04-30 20:38:41,703 [wrapper] Pilot exit status: 0
[2026-04-30 22:38:42] 2026-04-30 20:38:41,720 [wrapper] pandaids: 7116160495
[2026-04-30 22:38:42] 2026-04-30 20:38:41,895 [wrapper] cleanup supervisor_pilot 3656561 3201398
[2026-04-30 22:38:42] 2026-04-30 20:38:41,899 [wrapper] Test setup, not cleaning
[2026-04-30 22:38:42] 2026-04-30 20:38:41,907 [wrapper] apfmon messages muted
[2026-04-30 22:38:42] 2026-04-30 20:38:41,911 [wrapper] ==== wrapper stdout END ====
[2026-04-30 22:38:42] 2026-04-30 20:38:41,916 [wrapper] ==== wrapper stderr END ====
[2026-04-30 22:38:42]  *** Error codes and diagnostics ***
[2026-04-30 22:38:42]     "exeErrorCode": 0,
[2026-04-30 22:38:42]     "pilotErrorCode": 0,
[2026-04-30 22:38:42]  *** Listing of results directory ***
[2026-04-30 22:38:42] total 469292
[2026-04-30 22:38:42] -rwx------. 1 boinc boinc     36322 Apr 27 21:05 runpilot2-wrapper.sh
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc      5631 Apr 27 21:37 queuedata.json
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc    683926 Apr 27 21:37 pilot3.tar.gz
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc       100 Apr 30 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 22:38:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 19:10 run_atlas
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc       105 Apr 30 19:10 job.xml
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc      6538 Apr 30 19:10 init_data.xml
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc 261980529 Apr 30 19:10 EVNT.49863730._000027.pool.root.1
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc    697414 Apr 30 19:10 input.tar.gz
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc     15667 Apr 30 19:10 start_atlas.sh
[2026-04-30 22:38:42] drwxrwx--x. 2 boinc boinc      4096 Apr 30 19:10 shared
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc         0 Apr 30 19:10 boinc_lockfile
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc      2572 Apr 30 19:10 pandaJob.out
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc    993690 Apr 30 19:11 agis_schedconf.cvmfs.json
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc       440 Apr 30 19:11 workernode_map.json
[2026-04-30 22:38:42] drwx------. 5 boinc boinc      4096 Apr 30 19:11 pilot3
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc 211527258 Apr 30 22:36 HITS.49863733._000605.pool.root.1
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc       488 Apr 30 22:37 boinc_task_state.xml
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc      1028 Apr 30 22:37 memory_monitor_summary.json
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc   1510091 Apr 30 22:37 agis_ddmendpoints.agis.ALL.json
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc    308601 Apr 30 22:37 log.49863733._000605.job.log.tgz.1
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc      6369 Apr 30 22:37 heartbeat_new.json
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc      6260 Apr 30 22:37 heartbeat.json
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc        95 Apr 30 22:38 pilot_heartbeat.json
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc        28 Apr 30 22:38 wrapper_checkpoint.txt
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc      8192 Apr 30 22:38 boinc_mmap_file
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc      5019 Apr 30 22:38 pilotlog.txt
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc   1148217 Apr 30 22:38 log.49863733._000605.job.log.1
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc       357 Apr 30 22:38 output.list
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc       410 Apr 30 22:38 runtime_log
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc   1474560 Apr 30 22:38 result.tar.gz
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc      8845 Apr 30 22:38 runtime_log.err
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc       666 Apr 30 22:38 b35f6fc004e5.diag
[2026-04-30 22:38:42] -rw-r--r--. 1 boinc boinc     20943 Apr 30 22:38 stderr.txt
[2026-04-30 22:38:42] HITS file was successfully produced:
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc 211527258 Apr 30 22:36 shared/HITS.pool.root.1
[2026-04-30 22:38:42]  *** Contents of shared directory: ***
[2026-04-30 22:38:42] total 464564
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc 261980529 Apr 30 19:10 ATLAS.root_0
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc    697414 Apr 30 19:10 input.tar.gz
[2026-04-30 22:38:42] -rw-r--r--. 2 boinc boinc     15667 Apr 30 19:10 start_atlas.sh
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc 211527258 Apr 30 22:36 HITS.pool.root.1
[2026-04-30 22:38:42] -rw-------. 1 boinc boinc   1474560 Apr 30 22:38 result.tar.gz
22:38:43 (3197308): run_atlas exited; CPU time 48882.027543
22:38:43 (3197308): called boinc_finish(0)

</stderr_txt>
]]>

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