Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:25:15 (2811242): wrapper (7.7.26015): starting
13:25:15 (2811242): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 13:25:15] Arguments: --nthreads 8
[2026-04-28 13:25:15] Threads: 8
[2026-04-28 13:25:15] Checking for CVMFS
[2026-04-28 13:25:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 13:25:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 13:25:15] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 13:25:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 13:25:16] 2.13.3.0 1263916 174179 413872 158975 3 160 37303073 40960001 12430 16776704 0 391998332 99.588 425253198 39890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-28 13:25:16] CVMFS is ok
[2026-04-28 13:25:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 13:25:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 13:25:16] Further information can be found at the LHC@home message board.
[2026-04-28 13:25:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 13:25:16] Checking for apptainer binary...
[2026-04-28 13:25:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 13:25:16] Running /usr/bin/apptainer --version
[2026-04-28 13:25:16] apptainer version 1.4.5-3.el9
[2026-04-28 13:25:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 13:25:16] c-206-34.aglt2.org
[2026-04-28 13:25:16] apptainer works
[2026-04-28 13:25:16] Set ATHENA_PROC_NUMBER=8
[2026-04-28 13:25:16] Set ATHENA_CORE_NUMBER=8
[2026-04-28 13:25:16] Starting ATLAS job with PandaID=7116463748
[2026-04-28 13:25:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 19:26:24]  *** The last 200 lines of the pilot log: ***
[2026-04-28 19:26:24] 2026-04-28 23:25:20,575 | INFO     | extracted standard info from prmon json
[2026-04-28 19:26:24] 2026-04-28 23:25:20,575 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 19:26:24] 2026-04-28 23:25:20,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 19:26:24] 2026-04-28 23:25:20,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 19:26:24] 2026-04-28 23:25:20,610 | INFO     | fitting pss+swap vs Time
[2026-04-28 19:26:24] 2026-04-28 23:25:20,610 | INFO     | sum of square deviations: 13755837011.584837
[2026-04-28 19:26:24] 2026-04-28 23:25:20,646 | INFO     | sum of deviations: -59216367693.38132
[2026-04-28 19:26:24] 2026-04-28 23:25:20,646 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,647 | INFO     | mean y: 2554123.437853107
[2026-04-28 19:26:24] 2026-04-28 23:25:20,647 | INFO     | intersect: 2554123.437853107
[2026-04-28 19:26:24] 2026-04-28 23:25:20,647 | INFO     | chi2: 2.1141588044495507
[2026-04-28 19:26:24] 2026-04-28 23:25:20,647 | INFO     | sum of square deviations: 13181161959.071627
[2026-04-28 19:26:24] 2026-04-28 23:25:20,650 | INFO     | sum of deviations: -35252423354.23783
[2026-04-28 19:26:24] 2026-04-28 23:25:20,650 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,650 | INFO     | mean y: 2560413.0687679085
[2026-04-28 19:26:24] 2026-04-28 23:25:20,650 | INFO     | intersect: 2560413.0687679085
[2026-04-28 19:26:24] 2026-04-28 23:25:20,650 | INFO     | chi2: 1.399093933581066
[2026-04-28 19:26:24] 2026-04-28 23:25:20,651 | INFO     | current chi2=1.399093933581066 (change=33.822665987225186 %)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,651 | INFO     | sum of square deviations: 12622719769.058146
[2026-04-28 19:26:24] 2026-04-28 23:25:20,653 | INFO     | sum of deviations: -34490038031.83143
[2026-04-28 19:26:24] 2026-04-28 23:25:20,653 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | mean y: 2560621.351744186
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | intersect: 2560621.351744186
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | chi2: 1.3985193717589617
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | current chi2=1.3985193717589617 (change=0.0410667081254238 %)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | right removable region: 343
[2026-04-28 19:26:24] 2026-04-28 23:25:20,654 | INFO     | sum of square deviations: 13181150979.071627
[2026-04-28 19:26:24] 2026-04-28 23:25:20,657 | INFO     | sum of deviations: -99477912944.80803
[2026-04-28 19:26:24] 2026-04-28 23:25:20,657 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,657 | INFO     | mean y: 2564715.3782234956
[2026-04-28 19:26:24] 2026-04-28 23:25:20,657 | INFO     | intersect: 2564715.3782234956
[2026-04-28 19:26:24] 2026-04-28 23:25:20,658 | INFO     | chi2: 0.9792865197577755
[2026-04-28 19:26:24] 2026-04-28 23:25:20,658 | INFO     | current chi2=0.9792865197577755 (change=53.679613958198104 %)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,658 | INFO     | sum of square deviations: 12622719219.159924
[2026-04-28 19:26:24] 2026-04-28 23:25:20,660 | INFO     | sum of deviations: -82936032746.91568
[2026-04-28 19:26:24] 2026-04-28 23:25:20,660 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,660 | INFO     | mean y: 2560196.6715116277
[2026-04-28 19:26:24] 2026-04-28 23:25:20,661 | INFO     | intersect: 2560196.6715116277
[2026-04-28 19:26:24] 2026-04-28 23:25:20,661 | INFO     | chi2: 0.9357230742421005
[2026-04-28 19:26:24] 2026-04-28 23:25:20,661 | INFO     | current chi2=0.9357230742421005 (change=4.448488224513726 %)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,661 | INFO     | left removable region: 10
[2026-04-28 19:26:24] 2026-04-28 23:25:20,661 | INFO     | sum of square deviations: 11450139338.13215
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | sum of deviations: -58042117559.57658
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | mean x (centered): 0.0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | mean y: 2567133.5045045046
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | intersect: 2567133.5045045046
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | chi2: 0.20932799435183272
[2026-04-28 19:26:24] 2026-04-28 23:25:20,664 | INFO     | current memory leak: -5.07 B/s (using 333 data points, chi2=0.21)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | could have reported an average CPU frequency of 3228 MHz (15 samples)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | ..............................
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . Timing measurements:
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . get job = 0 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . initial setup = 8 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . payload setup = 11 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . stage-in = 0 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . payload execution = 21549 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . stage-out = 2 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | . log creation = 0 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,665 | INFO     | ..............................
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | 
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | job summary report
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | --------------------------------------------------
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | PanDA job id: 7116463748
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | task id: 49863851
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | errors: (none)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,870 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | pilot state: finished 
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | transexitcode: 0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | exeerrorcode: 0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | exeerrordiag: 
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | exitcode: 0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | exitmsg: OK
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | cpuconsumptiontime: 49493 s
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | nevents: 400
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | neventsw: 0
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | pid: 2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | pgrp: 2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | corecount: 8
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | event service: False
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | sizes: {0: 2280676, 1: 2282505, 11: 2282505, 21565: 2317147, 21568: 2326201, 21570: 2326339}
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | --------------------------------------------------
[2026-04-28 19:26:24] 2026-04-28 23:25:20,871 | INFO     | 
[2026-04-28 19:26:24] 2026-04-28 23:25:20,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-28 19:26:24] 2026-04-28 23:25:20,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | job 7116463748 has completed (purged errors)
[2026-04-28 19:26:24] 2026-04-28 23:25:20,903 | INFO     | overall cleanup function is called
[2026-04-28 19:26:24] 2026-04-28 23:25:21,746 | WARNING  | process 2822397 can no longer be monitored (due to stat problems) - aborting
[2026-04-28 19:26:24] 2026-04-28 23:25:21,918 | INFO     | --- collectZombieJob: --- 10, [2822397]
[2026-04-28 19:26:24] 2026-04-28 23:25:21,920 | INFO     | zombie collector waiting for pid 2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:21,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 19:26:24] 2026-04-28 23:25:21,941 | INFO     | collected zombie processes
[2026-04-28 19:26:24] 2026-04-28 23:25:21,941 | INFO     | will attempt to kill all subprocesses of pid=2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:21,973 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 19:26:24] 2026-04-28 23:25:22,348 | INFO     | process IDs to be killed: [2822397] (in reverse order)
[2026-04-28 19:26:24] 2026-04-28 23:25:22,423 | INFO     | number of running child processes to parent process 2822397: 1
[2026-04-28 19:26:24] 2026-04-28 23:25:22,423 | INFO     | maximum number of monitored processes: 6
[2026-04-28 19:26:24] 2026-04-28 23:25:22,423 | INFO     | aborting job monitoring since job object (job id=7116463748) has expired
[2026-04-28 19:26:24] 2026-04-28 23:25:22,598 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 19:26:24] 2026-04-28 23:25:22,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 19:26:24] 2026-04-28 23:25:22,611 | INFO     | did not find any defunct processes belonging to 2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:22,621 | INFO     | did not find any defunct processes belonging to 2822397
[2026-04-28 19:26:24] 2026-04-28 23:25:22,622 | INFO     | Ready for new job
[2026-04-28 19:26:24] 2026-04-28 23:25:22,624 | INFO     | ***************************************
[2026-04-28 19:26:24] 2026-04-28 23:25:22,624 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 19:26:24] 2026-04-28 23:25:22,624 | INFO     | ***************************************
[2026-04-28 19:26:24] 2026-04-28 23:25:22,624 | INFO     | 
[2026-04-28 19:26:24] 2026-04-28 23:25:22,628 | INFO     | architecture information:
[2026-04-28 19:26:24] 2026-04-28 23:25:22,628 | INFO     | executing command: cat /etc/os-release
[2026-04-28 19:26:24] 2026-04-28 23:25:22,757 | INFO     | cat /etc/os-release:
[2026-04-28 19:26:24] NAME="CentOS Linux"
[2026-04-28 19:26:24] VERSION="7 (Core)"
[2026-04-28 19:26:24] ID="centos"
[2026-04-28 19:26:24] ID_LIKE="rhel fedora"
[2026-04-28 19:26:24] VERSION_ID="7"
[2026-04-28 19:26:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 19:26:24] ANSI_COLOR="0;31"
[2026-04-28 19:26:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 19:26:24] HOME_URL="https://www.centos.org/"
[2026-04-28 19:26:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 19:26:24] 
[2026-04-28 19:26:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 19:26:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 19:26:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 19:26:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 19:26:24] 
[2026-04-28 19:26:24] 2026-04-28 23:25:22,757 | INFO     | ***************************************
[2026-04-28 19:26:24] 2026-04-28 23:25:23,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | INFO     | sufficient remaining disk space (78382104576 B)
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | INFO     | update_server=False
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 19:26:24] 2026-04-28 23:25:23,357 | INFO     | will abort loop
[2026-04-28 19:26:24] 2026-04-28 23:25:23,550 | INFO     | all job control threads have been joined
[2026-04-28 19:26:24] 2026-04-28 23:25:23,706 | INFO     | all data control threads have been joined
[2026-04-28 19:26:24] 2026-04-28 23:25:23,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 19:26:24] 2026-04-28 23:25:23,915 | INFO     | all payload control threads have been joined
[2026-04-28 19:26:24] 2026-04-28 23:25:24,363 | INFO     | [job] retrieve thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,369 | INFO     | [job] job monitor thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 19:26:24] 2026-04-28 23:25:24,556 | INFO     | [job] control thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,713 | INFO     | [data] control thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,727 | INFO     | [payload] validate_post thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,767 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,897 | INFO     | [payload] failed_post thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:24,920 | INFO     | [payload] control thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:25,450 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:25,550 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:25,802 | INFO     | [data] copytool_in thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:25,807 | INFO     | [job] validate thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:25,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 19:26:24] 2026-04-28 23:25:25,894 | INFO     | [data] copytool_out thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:26,889 | INFO     | [job] queue monitor thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:28,468 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:33,598 | INFO     | job.realtimelogging is not enabled
[2026-04-28 19:26:24] 2026-04-28 23:25:34,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 19:26:24] 2026-04-28 23:25:34,729 [wrapper] supervise_pilot (15 min periods counter: 25)
[2026-04-28 19:26:24] 2026-04-28 23:25:54,263 | INFO     | PID=2817867 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 19:26:24] 2026-04-28 23:25:54,287 | INFO     | .. there are 12 such processes running
[2026-04-28 19:26:24] 2026-04-28 23:25:54,287 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 19:26:24] 2026-04-28 23:25:54,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 19:26:24] 2026-04-28 23:25:54,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 19:26:24] 2026-04-28 23:26:17,237 | INFO     | [monitor] cgroup control has ended
[2026-04-28 19:26:24] 2026-04-28 23:26:18,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661955540800)>', '<ExcThread(monitor, started 139661515151104)>']
[2026-04-28 19:26:24] 2026-04-28 23:26:19,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 19:26:24] 2026-04-28 23:26:19,439 | INFO     | [monitor] control thread has ended
[2026-04-28 19:26:24] 2026-04-28 23:26:23,921 | INFO     | all workflow threads have been joined
[2026-04-28 19:26:24] 2026-04-28 23:26:23,921 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 19:26:24] 2026-04-28 23:26:23,921 | INFO     | traces error code: 0
[2026-04-28 19:26:24] 2026-04-28 23:26:23,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 19:26:24] 2026-04-28 23:26:24,440 [wrapper] ==== pilot stdout END ====
[2026-04-28 19:26:24] 2026-04-28 23:26:24,448 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 19:26:24] 2026-04-28 23:26:24,451 [wrapper] pilotpid: 2817867
[2026-04-28 19:26:24] 2026-04-28 23:26:24,453 [wrapper] Pilot exit status: 0
[2026-04-28 19:26:24] 2026-04-28 23:26:24,476 [wrapper] pandaids: 7116463748
[2026-04-28 19:26:24] 2026-04-28 23:26:24,661 [wrapper] cleanup supervisor_pilot 3482205 2817868
[2026-04-28 19:26:24] 2026-04-28 23:26:24,678 [wrapper] Test setup, not cleaning
[2026-04-28 19:26:24] 2026-04-28 23:26:24,688 [wrapper] apfmon messages muted
[2026-04-28 19:26:24] 2026-04-28 23:26:24,692 [wrapper] ==== wrapper stdout END ====
[2026-04-28 19:26:24] 2026-04-28 23:26:24,694 [wrapper] ==== wrapper stderr END ====
[2026-04-28 19:26:24]  *** Error codes and diagnostics ***
[2026-04-28 19:26:24]     "exeErrorCode": 0,
[2026-04-28 19:26:24]     "pilotErrorCode": 0,
[2026-04-28 19:26:24]  *** Listing of results directory ***
[2026-04-28 19:26:24] total 473992
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas    683926 Apr 28 06:25 pilot3.tar.gz
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas      5631 Apr 28 06:57 queuedata.json
[2026-04-28 19:26:24] -rwx------. 1 boincer umatlas     36322 Apr 28 06:57 runpilot2-wrapper.sh
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas       100 Apr 28 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 19:26:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 28 13:25 run_atlas
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas       105 Apr 28 13:25 job.xml
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas 262987218 Apr 28 13:25 EVNT.49863848._000035.pool.root.1
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 13:25 start_atlas.sh
[2026-04-28 19:26:24] drwxrwx--x. 2 boincer umatlas      4096 Apr 28 13:25 shared
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas    697435 Apr 28 13:25 input.tar.gz
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas         0 Apr 28 13:25 boinc_lockfile
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas      2644 Apr 28 13:25 pandaJob.out
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas        57 Apr 28 13:25 setup.sh.local
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas   1001823 Apr 28 13:25 agis_schedconf.cvmfs.json
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas       430 Apr 28 13:25 workernode_map.json
[2026-04-28 19:26:24] drwx------. 5 boincer umatlas      4096 Apr 28 13:25 pilot3
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas      6824 Apr 28 19:20 init_data.xml
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas 213524419 Apr 28 19:24 HITS.49863851._001016.pool.root.1
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas       488 Apr 28 19:24 boinc_task_state.xml
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas        95 Apr 28 19:25 pilot_heartbeat.json
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas      1049 Apr 28 19:25 memory_monitor_summary.json
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas   1512704 Apr 28 19:25 agis_ddmendpoints.agis.ALL.json
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas    447051 Apr 28 19:25 log.49863851._001016.job.log.tgz.1
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas      6370 Apr 28 19:25 heartbeat_new.json
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas      6261 Apr 28 19:25 heartbeat.json
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas        28 Apr 28 19:26 wrapper_checkpoint.txt
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas      8192 Apr 28 19:26 boinc_mmap_file
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas      4897 Apr 28 19:26 pilotlog.txt
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas   1908381 Apr 28 19:26 log.49863851._001016.job.log.1
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas       357 Apr 28 19:26 output.list
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas       410 Apr 28 19:26 runtime_log
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas   2375680 Apr 28 19:26 result.tar.gz
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas      8965 Apr 28 19:26 runtime_log.err
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas       661 Apr 28 19:26 928f1fc7229a.diag
[2026-04-28 19:26:24] -rw-r--r--. 1 boincer umatlas     21017 Apr 28 19:26 stderr.txt
[2026-04-28 19:26:24] HITS file was successfully produced:
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas 213524419 Apr 28 19:24 shared/HITS.pool.root.1
[2026-04-28 19:26:24]  *** Contents of shared directory: ***
[2026-04-28 19:26:24] total 468372
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas 262987218 Apr 28 13:25 ATLAS.root_0
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 13:25 start_atlas.sh
[2026-04-28 19:26:24] -rw-r--r--. 2 boincer umatlas    697435 Apr 28 13:25 input.tar.gz
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas 213524419 Apr 28 19:24 HITS.pool.root.1
[2026-04-28 19:26:24] -rw-------. 1 boincer umatlas   2375680 Apr 28 19:26 result.tar.gz
19:26:26 (2811242): run_atlas exited; CPU time 49833.366512
19:26:26 (2811242): called boinc_finish(0)

</stderr_txt>
]]>

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