Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:57 (17708): wrapper (7.7.26015): starting
22:26:57 (17708): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 22:26:57] Arguments: --nthreads 8
[2026-04-28 22:26:57] Threads: 8
[2026-04-28 22:26:57] Checking for CVMFS
[2026-04-28 22:26:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 22:26:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 22:26:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 22:26:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 22:26:58] 2.11.2.0 19098 18938 99108 158980 1 102 15345667 25165824 343 130560 0 5281798 99.896 1982921 4886 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 22:26:58] CVMFS is ok
[2026-04-28 22:26:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 22:26:58] Checking for apptainer binary...
[2026-04-28 22:26:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 22:26:58] Running /usr/bin/apptainer --version
[2026-04-28 22:26:58] apptainer version 1.3.2-1.el7
[2026-04-28 22:26:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 22:27:00] cg-vwn407.simple-grid.lan
[2026-04-28 22:27:00] apptainer works
[2026-04-28 22:27:00] Set ATHENA_PROC_NUMBER=8
[2026-04-28 22:27:00] Set ATHENA_CORE_NUMBER=8
[2026-04-28 22:27:00] Starting ATLAS job with PandaID=7116329320
[2026-04-28 22:27:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 02:58:02]  *** The last 200 lines of the pilot log: ***
[2026-04-29 02:58:02] 2026-04-29 00:57:06,101 | INFO     | log transfer has been attempted: DONE
[2026-04-29 02:58:02] 2026-04-29 00:57:06,101 | INFO     | job 7116329320 has finished - writing final server update
[2026-04-29 02:58:02] 2026-04-29 00:57:06,101 | INFO     | total number of processed events: 400 (read)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,103 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7116329320/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,104 | INFO     | extracted standard info from prmon json
[2026-04-29 02:58:02] 2026-04-29 00:57:06,104 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 02:58:02] 2026-04-29 00:57:06,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 02:58:02] 2026-04-29 00:57:06,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 02:58:02] 2026-04-29 00:57:06,110 | INFO     | fitting pss+swap vs Time
[2026-04-29 02:58:02] 2026-04-29 00:57:06,110 | INFO     | sum of square deviations: 5770452380.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,113 | INFO     | sum of deviations: -27716222970.999992
[2026-04-29 02:58:02] 2026-04-29 00:57:06,113 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,113 | INFO     | mean y: 2579338.430188679
[2026-04-29 02:58:02] 2026-04-29 00:57:06,114 | INFO     | intersect: 2579338.430188679
[2026-04-29 02:58:02] 2026-04-29 00:57:06,114 | INFO     | chi2: 2.6115726786311484
[2026-04-29 02:58:02] 2026-04-29 00:57:06,115 | INFO     | sum of square deviations: 5449944045.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,117 | INFO     | sum of deviations: -8979975828.500004
[2026-04-29 02:58:02] 2026-04-29 00:57:06,117 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,117 | INFO     | mean y: 2588121.880769231
[2026-04-29 02:58:02] 2026-04-29 00:57:06,117 | INFO     | intersect: 2588121.880769231
[2026-04-29 02:58:02] 2026-04-29 00:57:06,118 | INFO     | chi2: 1.8429916182652344
[2026-04-29 02:58:02] 2026-04-29 00:57:06,118 | INFO     | current chi2=1.8429916182652344 (change=29.42981700853007 %)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,119 | INFO     | sum of square deviations: 5141528960.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,121 | INFO     | sum of deviations: -8593557146.000002
[2026-04-29 02:58:02] 2026-04-29 00:57:06,121 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,121 | INFO     | mean y: 2588313.035294118
[2026-04-29 02:58:02] 2026-04-29 00:57:06,122 | INFO     | intersect: 2588313.035294118
[2026-04-29 02:58:02] 2026-04-29 00:57:06,122 | INFO     | chi2: 1.8428202766233386
[2026-04-29 02:58:02] 2026-04-29 00:57:06,122 | INFO     | current chi2=1.8428202766233386 (change=0.009296930067272132 %)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,122 | INFO     | right removable region: 254
[2026-04-29 02:58:02] 2026-04-29 00:57:06,123 | INFO     | sum of square deviations: 5449944045.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,125 | INFO     | sum of deviations: -72855563896.49997
[2026-04-29 02:58:02] 2026-04-29 00:57:06,126 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,126 | INFO     | mean y: 2600648.5807692306
[2026-04-29 02:58:02] 2026-04-29 00:57:06,126 | INFO     | intersect: 2600648.5807692306
[2026-04-29 02:58:02] 2026-04-29 00:57:06,127 | INFO     | chi2: 1.027155227624558
[2026-04-29 02:58:02] 2026-04-29 00:57:06,127 | INFO     | current chi2=1.027155227624558 (change=60.66909276432851 %)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,128 | INFO     | sum of square deviations: 5141528960.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,130 | INFO     | sum of deviations: -77016084970.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,130 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,130 | INFO     | mean y: 2602687.2392156865
[2026-04-29 02:58:02] 2026-04-29 00:57:06,130 | INFO     | intersect: 2602687.2392156865
[2026-04-29 02:58:02] 2026-04-29 00:57:06,131 | INFO     | chi2: 0.9892539655770192
[2026-04-29 02:58:02] 2026-04-29 00:57:06,131 | INFO     | current chi2=0.9892539655770192 (change=3.689925439525901 %)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,131 | INFO     | left removable region: 10
[2026-04-29 02:58:02] 2026-04-29 00:57:06,132 | INFO     | sum of square deviations: 4504437945.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,134 | INFO     | sum of deviations: -56514658989.50001
[2026-04-29 02:58:02] 2026-04-29 00:57:06,134 | INFO     | mean x (centered): 0.0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,134 | INFO     | mean y: 2613124.2090163934
[2026-04-29 02:58:02] 2026-04-29 00:57:06,134 | INFO     | intersect: 2613124.2090163934
[2026-04-29 02:58:02] 2026-04-29 00:57:06,135 | INFO     | chi2: 0.19607717070706826
[2026-04-29 02:58:02] 2026-04-29 00:57:06,135 | INFO     | current memory leak: -12.55 B/s (using 244 data points, chi2=0.20)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,136 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,136 | INFO     | ..............................
[2026-04-29 02:58:02] 2026-04-29 00:57:06,136 | INFO     | . Timing measurements:
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . get job = 0 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . initial setup = 8 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . payload setup = 18 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . stage-in = 0 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . payload execution = 16148 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . stage-out = 1 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | . log creation = 0 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,137 | INFO     | ..............................
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | 
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | job summary report
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | --------------------------------------------------
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | PanDA job id: 7116329320
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | task id: 49820244
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | errors: (none)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | pilot state: finished 
[2026-04-29 02:58:02] 2026-04-29 00:57:06,252 | INFO     | transexitcode: 0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | exeerrorcode: 0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | exeerrordiag: 
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | exitcode: 0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | exitmsg: OK
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | cpuconsumptiontime: 101268 s
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | nevents: 400
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | neventsw: 0
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | pid: 26302
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | pgrp: 26302
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | corecount: 8
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | event service: False
[2026-04-29 02:58:02] 2026-04-29 00:57:06,253 | INFO     | sizes: {0: 2280680, 1: 2282509, 16170: 2313970, 16171: 2313969, 16174: 2323023, 16176: 2323079, 16177: 2323401}
[2026-04-29 02:58:02] 2026-04-29 00:57:06,254 | INFO     | --------------------------------------------------
[2026-04-29 02:58:02] 2026-04-29 00:57:06,254 | INFO     | 
[2026-04-29 02:58:02] 2026-04-29 00:57:06,254 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-29 02:58:02] 2026-04-29 00:57:06,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,286 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 02:58:02] 2026-04-29 00:57:06,287 | INFO     | job 7116329320 has completed (purged errors)
[2026-04-29 02:58:02] 2026-04-29 00:57:06,287 | INFO     | overall cleanup function is called
[2026-04-29 02:58:02] 2026-04-29 00:57:07,296 | INFO     | --- collectZombieJob: --- 10, [26302]
[2026-04-29 02:58:02] 2026-04-29 00:57:07,296 | INFO     | zombie collector waiting for pid 26302
[2026-04-29 02:58:02] 2026-04-29 00:57:07,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 02:58:02] 2026-04-29 00:57:07,296 | INFO     | collected zombie processes
[2026-04-29 02:58:02] 2026-04-29 00:57:07,296 | INFO     | will attempt to kill all subprocesses of pid=26302
[2026-04-29 02:58:02] 2026-04-29 00:57:07,354 | INFO     | process IDs to be killed: [26302] (in reverse order)
[2026-04-29 02:58:02] 2026-04-29 00:57:07,404 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 02:58:02] 2026-04-29 00:57:07,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 02:58:02] 2026-04-29 00:57:07,406 | INFO     | did not find any defunct processes belonging to 26302
[2026-04-29 02:58:02] 2026-04-29 00:57:07,407 | INFO     | did not find any defunct processes belonging to 26302
[2026-04-29 02:58:02] 2026-04-29 00:57:07,408 | INFO     | Ready for new job
[2026-04-29 02:58:02] 2026-04-29 00:57:07,410 | INFO     | ***************************************
[2026-04-29 02:58:02] 2026-04-29 00:57:07,410 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 02:58:02] 2026-04-29 00:57:07,410 | INFO     | ***************************************
[2026-04-29 02:58:02] 2026-04-29 00:57:07,410 | INFO     | 
[2026-04-29 02:58:02] 2026-04-29 00:57:07,411 | INFO     | pilot is running in a VM
[2026-04-29 02:58:02] 2026-04-29 00:57:07,411 | INFO     | architecture information:
[2026-04-29 02:58:02] 2026-04-29 00:57:07,411 | INFO     | executing command: cat /etc/os-release
[2026-04-29 02:58:02] 2026-04-29 00:57:07,436 | INFO     | cat /etc/os-release:
[2026-04-29 02:58:02] NAME="CentOS Linux"
[2026-04-29 02:58:02] VERSION="7 (Core)"
[2026-04-29 02:58:02] ID="centos"
[2026-04-29 02:58:02] ID_LIKE="rhel fedora"
[2026-04-29 02:58:02] VERSION_ID="7"
[2026-04-29 02:58:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 02:58:02] ANSI_COLOR="0;31"
[2026-04-29 02:58:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 02:58:02] HOME_URL="https://www.centos.org/"
[2026-04-29 02:58:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 02:58:02] 
[2026-04-29 02:58:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 02:58:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 02:58:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 02:58:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 02:58:02] 
[2026-04-29 02:58:02] 2026-04-29 00:57:07,436 | INFO     | ***************************************
[2026-04-29 02:58:02] 2026-04-29 00:57:07,939 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-29 02:58:02] 2026-04-29 00:57:07,964 | INFO     | sufficient remaining disk space (493449379840 B)
[2026-04-29 02:58:02] 2026-04-29 00:57:07,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 02:58:02] 2026-04-29 00:57:07,965 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 02:58:02] 2026-04-29 00:57:07,965 | INFO     | update_server=False
[2026-04-29 02:58:02] 2026-04-29 00:57:07,965 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 02:58:02] 2026-04-29 00:57:07,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:58:02] 2026-04-29 00:57:08,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:58:02] 2026-04-29 00:57:08,107 | INFO     | aborting loop
[2026-04-29 02:58:02] 2026-04-29 00:57:08,249 | INFO     | all data control threads have been joined
[2026-04-29 02:58:02] 2026-04-29 00:57:08,397 | INFO     | all job control threads have been joined
[2026-04-29 02:58:02] 2026-04-29 00:57:08,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 02:58:02] 2026-04-29 00:57:08,651 | INFO     | all payload control threads have been joined
[2026-04-29 02:58:02] 2026-04-29 00:57:08,971 | INFO     | [job] retrieve thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:08,971 | INFO     | [job] queue monitor thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,113 | INFO     | [job] job monitor thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,255 | INFO     | [data] control thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,351 | INFO     | [data] copytool_in thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,351 | INFO     | [job] validate thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,403 | INFO     | [job] control thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,416 | INFO     | [payload] validate_post thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,473 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,657 | INFO     | [payload] control thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,805 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:09,835 | INFO     | [payload] failed_post thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:10,429 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:10,584 | INFO     | [data] copytool_out thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:11,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 02:58:02] 2026-04-29 00:57:15,391 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:18,755 | INFO     | job.realtimelogging is not enabled
[2026-04-29 02:58:02] 2026-04-29 00:57:19,760 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 02:58:02] 2026-04-29 00:57:35,214 [wrapper] supervise_pilot (15 min periods counter: 19)
[2026-04-29 02:58:02] 2026-04-29 00:57:37,731 | INFO     | PID=21818 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-29 02:58:02] 2026-04-29 00:57:37,731 | INFO     | .. there are 2 such processes running
[2026-04-29 02:58:02] 2026-04-29 00:57:37,732 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 02:58:02] 2026-04-29 00:57:37,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 02:58:02] 2026-04-29 00:57:37,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 02:58:02] 2026-04-29 00:57:55,334 | INFO     | [monitor] cgroup control has ended
[2026-04-29 02:58:02] 2026-04-29 00:57:57,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820721571648)>', '<ExcThread(monitor, started 139819774637824)>']
[2026-04-29 02:58:02] 2026-04-29 00:57:57,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 02:58:02] 2026-04-29 00:57:57,833 | INFO     | [monitor] control thread has ended
[2026-04-29 02:58:02] 2026-04-29 00:58:02,114 | INFO     | all workflow threads have been joined
[2026-04-29 02:58:02] 2026-04-29 00:58:02,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 02:58:02] 2026-04-29 00:58:02,115 | INFO     | traces error code: 0
[2026-04-29 02:58:02] 2026-04-29 00:58:02,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 02:58:02] 2026-04-29 00:58:02,262 [wrapper] ==== pilot stdout END ====
[2026-04-29 02:58:02] 2026-04-29 00:58:02,266 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 02:58:02] 2026-04-29 00:58:02,270 [wrapper] pilotpid: 21818
[2026-04-29 02:58:02] 2026-04-29 00:58:02,273 [wrapper] Pilot exit status: 0
[2026-04-29 02:58:02] 2026-04-29 00:58:02,293 [wrapper] pandaids: 7116329320
[2026-04-29 02:58:02] 2026-04-29 00:58:02,334 [wrapper] cleanup supervisor_pilot 24522 21819
[2026-04-29 02:58:02] 2026-04-29 00:58:02,341 [wrapper] Test setup, not cleaning
[2026-04-29 02:58:02] 2026-04-29 00:58:02,355 [wrapper] apfmon messages muted
[2026-04-29 02:58:02] 2026-04-29 00:58:02,360 [wrapper] ==== wrapper stdout END ====
[2026-04-29 02:58:02] 2026-04-29 00:58:02,364 [wrapper] ==== wrapper stderr END ====
[2026-04-29 02:58:02]  *** Error codes and diagnostics ***
[2026-04-29 02:58:02]     "exeErrorCode": 0,
[2026-04-29 02:58:02]     "pilotErrorCode": 0,
[2026-04-29 02:58:02]  *** Listing of results directory ***
[2026-04-29 02:58:02] total 2452568
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc     683926 Apr 28 02:34 pilot3.tar.gz
[2026-04-29 02:58:02] -rwx------. 1 boinc boinc      36322 Apr 28 02:37 runpilot2-wrapper.sh
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc       5631 Apr 28 02:38 queuedata.json
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc        100 Apr 28 22:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 02:58:02] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 22:26 run_atlas
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc        105 Apr 28 22:26 job.xml
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc 2224659934 Apr 28 22:26 EVNT.49820242._000068.pool.root.1
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc       6305 Apr 28 22:26 init_data.xml
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc      15667 Apr 28 22:26 start_atlas.sh
[2026-04-29 02:58:02] drwxrwx--x. 2 boinc boinc         68 Apr 28 22:26 shared
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc     697405 Apr 28 22:26 input.tar.gz
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc          0 Apr 28 22:26 boinc_lockfile
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc       2551 Apr 28 22:27 pandaJob.out
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc    1001831 Apr 28 22:27 agis_schedconf.cvmfs.json
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc        415 Apr 28 22:27 workernode_map.json
[2026-04-29 02:58:02] drwx------. 5 boinc boinc       4096 Apr 28 22:27 pilot3
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc  278760726 Apr 29 02:56 HITS.49820244._024281.pool.root.1
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc        490 Apr 29 02:56 boinc_task_state.xml
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc         95 Apr 29 02:56 pilot_heartbeat.json
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc       1019 Apr 29 02:56 memory_monitor_summary.json
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc    1512704 Apr 29 02:57 agis_ddmendpoints.agis.ALL.json
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc     440584 Apr 29 02:57 log.49820244._024281.job.log.tgz.1
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc       6343 Apr 29 02:57 heartbeat_new.json
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc       6234 Apr 29 02:57 heartbeat.json
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc       8192 Apr 29 02:57 boinc_mmap_file
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc         29 Apr 29 02:57 wrapper_checkpoint.txt
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc       4955 Apr 29 02:58 pilotlog.txt
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc    1500969 Apr 29 02:58 log.49820244._024281.job.log.1
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc        357 Apr 29 02:58 output.list
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc        410 Apr 29 02:58 runtime_log
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc    1955840 Apr 29 02:58 result.tar.gz
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc       8439 Apr 29 02:58 runtime_log.err
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc        657 Apr 29 02:58 014bb3be7b22.diag
[2026-04-29 02:58:02] -rw-r--r--. 1 boinc boinc      20597 Apr 29 02:58 stderr.txt
[2026-04-29 02:58:02] HITS file was successfully produced:
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc 278760726 Apr 29 02:56 shared/HITS.pool.root.1
[2026-04-29 02:58:02]  *** Contents of shared directory: ***
[2026-04-29 02:58:02] total 2447364
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc 2224659934 Apr 28 22:26 ATLAS.root_0
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc      15667 Apr 28 22:26 start_atlas.sh
[2026-04-29 02:58:02] -rw-r--r--. 2 boinc boinc     697405 Apr 28 22:26 input.tar.gz
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc  278760726 Apr 29 02:56 HITS.pool.root.1
[2026-04-29 02:58:02] -rw-------. 1 boinc boinc    1955840 Apr 29 02:58 result.tar.gz
02:58:03 (17708): run_atlas exited; CPU time 101406.234214
02:58:03 (17708): called boinc_finish(0)

</stderr_txt>
]]>

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