Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 10:45:29 (2508): vboxwrapper version 26210
2026-04-28 10:45:29 (2508): BOINC client version: 8.2.11
2026-04-28 10:45:30 (2508): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-28 10:45:30 (2508): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 10:45:31 (2508): Create VM. (boinc_8330972a8cab05eb, slot#14)
2026-04-28 10:45:31 (2508): Setting Memory Size for VM. (4400MB)
2026-04-28 10:45:31 (2508): Setting CPU Count for VM. (4)
2026-04-28 10:45:32 (2508): Setting Chipset Options for VM.
2026-04-28 10:45:32 (2508): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 10:45:32 (2508): Setting Boot Options for VM.
2026-04-28 10:45:33 (2508): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 10:45:33 (2508): Enabling VM Network Access.
2026-04-28 10:45:33 (2508): Disabling USB Support for VM.
2026-04-28 10:45:34 (2508): Disabling COM Port Support for VM.
2026-04-28 10:45:34 (2508): Disabling LPT Port Support for VM.
2026-04-28 10:45:34 (2508): Disabling Audio Support for VM.
2026-04-28 10:45:34 (2508): Disabling Clipboard Support for VM.
2026-04-28 10:45:35 (2508): Disabling Drag and Drop Support for VM.
2026-04-28 10:45:35 (2508): Adding storage controller(s) to VM.
2026-04-28 10:45:35 (2508): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 10:45:36 (2508): Adding VirtualBox Guest Additions to VM.
2026-04-28 10:45:36 (2508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 10:45:36 (2508): forwarding host port 56301 to guest port 80
2026-04-28 10:45:37 (2508): Enabling remote desktop for VM.
2026-04-28 10:45:37 (2508): Required extension pack not installed, remote desktop not enabled.
2026-04-28 10:45:37 (2508): Enabling shared directory for VM.
2026-04-28 10:45:37 (2508): Starting VM using VBoxManage interface. (boinc_8330972a8cab05eb, slot#14)
2026-04-28 10:45:42 (2508): Successfully started VM. (PID = '7900')
2026-04-28 10:45:42 (2508): Reporting VM Process ID to BOINC.
2026-04-28 10:45:42 (2508): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-28 10:45:42 (2508): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 10:45:42 (2508): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 10:45:42 (2508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 10:45:42 (2508): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 10:45:42 (2508): Detected: Web Application Enabled (http://localhost:56301)
2026-04-28 10:45:42 (2508): Preference change detected
2026-04-28 10:45:42 (2508): Setting CPU throttle for VM. (100%)
2026-04-28 10:45:42 (2508): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 10:45:44 (2508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 10:45:44 (2508): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 10:45:47 (2508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 10:45:47 (2508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 10:45:47 (2508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 10:45:58 (2508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 10:45:58 (2508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 10:46:20 (2508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000117 main     Log opened 2026-04-28T10:46:18.641244000Z
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000226 main     OS Product: Linux
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000261 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000288 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000316 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000316 main     Process ID: 1323
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.000317 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 10:46:20 (2508): Guest Log: 00:00:00.001048 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 10:46:21 (2508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 10:46:21 (2508): Guest Log: [INFO] Mounting shared directory
2026-04-28 10:46:21 (2508): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 10:46:30 (2508): Guest Log: 00:00:10.003663 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 177 089 000ns (GuestNow=1 777 387 589 820 925 000 ns GuestLast=1 777 373 178 643 836 000 ns fSetTimeLastLoop=true )
2026-04-28 10:46:43 (2508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 10:46:43 (2508): Guest Log: [INFO] Detected branch: prod
2026-04-28 10:46:44 (2508): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 10:46:44 (2508): Guest Log: Copying input files
2026-04-28 10:46:44 (2508): Guest Log: Copied input files into RunAtlas.
2026-04-28 10:46:44 (2508): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 10:46:44 (2508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 10:46:44 (2508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 10:46:44 (2508): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 10:47:41 (2508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 10:47:43 (2508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 10:47:43 (2508): Guest Log: 2.6.3.0 1609 1 30160 158970 3 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 10:47:56 (2508): Guest Log: copied the webapp to /var/www
2026-04-28 10:47:56 (2508): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-28 10:47:56 (2508): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-28 10:47:58 (2508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 10:47:58 (2508): Guest Log:  *** Starting ATLAS job. (PandaID=7116404868 taskID=49863733) ***
2026-04-28 12:25:45 (2508): Status Report: Elapsed Time: '6000.000000'
2026-04-28 12:25:45 (2508): Status Report: CPU Time: '20958.312500'
2026-04-28 14:05:45 (2508): Status Report: Elapsed Time: '12000.000000'
2026-04-28 14:05:45 (2508): Status Report: CPU Time: '44232.359375'
2026-04-28 14:35:59 (2508): Guest Log:  *** Job finished ***
2026-04-28 14:35:59 (2508): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:05,902 | INFO     | [data] copytool_in thread has finished
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:07,620 | INFO     | [data] queue_monitor thread has finished
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:45,412 | INFO     | [monitor] cgroup control has ended
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:46,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341698434880)>', '<ExcThread(monitor, started 140340673640192)>']
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:47,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:47,150 | INFO     | [monitor] control thread has ended
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,265 | INFO     | all workflow threads have been joined
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,265 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,266 | INFO     | traces error code: 0
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,887 [wrapper] ==== pilot stdout END ====
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,905 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,917 [wrapper] pilotpid: 6043
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:51,933 [wrapper] Pilot exit status: 0
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,357 [wrapper] pandaids: 7116404868
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,418 [wrapper] cleanup supervisor_pilot 28715 6044
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,435 [wrapper] Test setup, not cleaning
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,451 [wrapper] apfmon messages muted
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,472 [wrapper] ==== wrapper stdout END ====
2026-04-28 14:35:59 (2508): Guest Log: 2026-04-28 18:35:52,488 [wrapper] ==== wrapper stderr END ====
2026-04-28 14:35:59 (2508): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 14:35:59 (2508): Guest Log:     "exeErrorCode": 0,
2026-04-28 14:35:59 (2508): Guest Log:     "pilotErrorCode": 0,
2026-04-28 14:35:59 (2508): Guest Log:  *** Listing of results directory ***
2026-04-28 14:35:59 (2508): Guest Log: total 218368
2026-04-28 14:35:59 (2508): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 10:25 pilot3.tar.gz
2026-04-28 14:35:59 (2508): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 10:29 queuedata.json
2026-04-28 14:35:59 (2508): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 10:30 runpilot2-wrapper.sh
2026-04-28 14:35:59 (2508): Guest Log: -rwxr-xr-x. 1 atlas atlas      8403 Apr 28 14:46 init_data.xml
2026-04-28 14:35:59 (2508): Guest Log: -rwxr-xr-x. 1 atlas atlas    697414 Apr 28 14:46 input.tar.gz
2026-04-28 14:35:59 (2508): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 14:46 start_atlas.sh
2026-04-28 14:35:59 (2508): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 14:46 EVNT.49863730._000058.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 14:35:59 (2508): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 28 14:47 pandaJob.out
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas    993626 Apr 28 14:50 agis_schedconf.cvmfs.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas       421 Apr 28 14:50 workernode_map.json
2026-04-28 14:35:59 (2508): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 14:50 pilot3
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas 216423358 Apr 28 18:34 HITS.49863733._001424.pool.root.1
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 18:34 pilot_heartbeat.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas      1042 Apr 28 18:34 memory_monitor_summary.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 18:34 agis_ddmendpoints.agis.ALL.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas    337280 Apr 28 18:35 log.49863733._001424.job.log.tgz.1
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas      6357 Apr 28 18:35 heartbeat_new.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas      6248 Apr 28 18:35 heartbeat.json
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas      5519 Apr 28 18:35 pilotlog.txt
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas   1225560 Apr 28 18:35 log.49863733._001424.job.log.1
2026-04-28 14:35:59 (2508): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 18:35 output.list
2026-04-28 14:35:59 (2508): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 18:35 runtime_log
2026-04-28 14:36:00 (2508): Guest Log: -rw-------. 1 atlas atlas   1576960 Apr 28 18:35 result.tar.gz
2026-04-28 14:36:00 (2508): Guest Log: -rw-r--r--. 1 atlas atlas      8366 Apr 28 18:35 runtime_log.err
2026-04-28 14:36:00 (2508): Guest Log: -rw-------. 1 atlas atlas       655 Apr 28 18:35 8c42bdf12bff.diag
2026-04-28 14:36:00 (2508): Guest Log: Looking for outputfile HITS.49863733._001424.pool.root.1
2026-04-28 14:36:00 (2508): Guest Log: HITS file was successfully produced
2026-04-28 14:36:00 (2508): Guest Log: -rw-------. 1 atlas atlas 216423358 Apr 28 18:34 /home/atlas/RunAtlas/HITS.49863733._001424.pool.root.1
2026-04-28 14:36:11 (2508): Guest Log: Successfully finished the ATLAS job!
2026-04-28 14:36:11 (2508): Guest Log: Copying the results back to the shared directory!
2026-04-28 14:36:11 (2508): Guest Log:  *** Contents of shared directory: ***
2026-04-28 14:36:12 (2508): Guest Log: total 473408
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root 266035308 Apr 28 14:45 ATLAS.root_0
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root 216423358 Apr 28 18:36 HITS.pool.root.1
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root      8403 Apr 28 14:45 init_data.xml
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root    697414 Apr 28 14:25 input.tar.gz
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root   1576960 Apr 28  2026 result.tar.gz
2026-04-28 14:36:12 (2508): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 14:25 start_atlas.sh
2026-04-28 14:36:12 (2508): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 14:36:12 (2508): VM Completion File Detected.
2026-04-28 14:36:12 (2508): Powering off VM.
2026-04-28 14:36:13 (2508): Successfully stopped VM.
2026-04-28 14:36:13 (2508): Deregistering VM. (boinc_8330972a8cab05eb, slot#14)
2026-04-28 14:36:14 (2508): Removing network bandwidth throttle group from VM.
2026-04-28 14:36:14 (2508): Removing VM from VirtualBox.
2026-04-28 14:36:20 (2508): called boinc_finish(0)

</stderr_txt>
]]>

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