Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:14 (4102831): wrapper (7.7.26015): starting
06:42:14 (4102831): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 06:42:14] Arguments: --nthreads 8
[2026-04-28 06:42:14] Threads: 8
[2026-04-28 06:42:14] Checking for CVMFS
[2026-04-28 06:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 06:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 06:42:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 06:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 06:42:16] 2.13.3.0 14328 250242 246020 158963 1 861 23077344 40960001 51309 16776704 0 2921619337 99.770 1849050900 43719 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-28 06:42:16] CVMFS is ok
[2026-04-28 06:42:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 06:42:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 06:42:17] Further information can be found at the LHC@home message board.
[2026-04-28 06:42:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 06:42:17] Checking for apptainer binary...
[2026-04-28 06:42:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 06:42:17] Running /usr/bin/apptainer --version
[2026-04-28 06:42:18] apptainer version 1.4.5-3.el9
[2026-04-28 06:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 06:42:19] c8-16-2.aglt2.org
[2026-04-28 06:42:19] apptainer works
[2026-04-28 06:42:19] Set ATHENA_PROC_NUMBER=8
[2026-04-28 06:42:19] Set ATHENA_CORE_NUMBER=8
[2026-04-28 06:42:19] Starting ATLAS job with PandaID=7116401649
[2026-04-28 06:42:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 09:39:02]  *** The last 200 lines of the pilot log: ***
[2026-04-28 09:39:02] 2026-04-28 13:38:28,235 | INFO     | sum of square deviations: 1470231525.4047692
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | sum of deviations: 78873039421.3214
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | mean y: 2468952.0178571427
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | intersect: 2468952.0178571427
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | chi2: 5.561182692348358
[2026-04-28 09:39:02] 2026-04-28 13:38:28,236 | INFO     | sum of square deviations: 1342817408.5030677
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | sum of deviations: 76501421360.0675
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | mean y: 2466112.2147239265
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | intersect: 2466112.2147239265
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | chi2: 5.572941168050005
[2026-04-28 09:39:02] 2026-04-28 13:38:28,237 | INFO     | current chi2=5.572941168050005 (change=-0.2114383999257182 %)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,279 | INFO     | right removable region: 162
[2026-04-28 09:39:02] 2026-04-28 13:38:28,279 | INFO     | sum of square deviations: 1342821435.3865042
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | sum of deviations: 22124453797.662575
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | mean y: 2536746.5337423314
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | intersect: 2536746.5337423314
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | chi2: 0.9485619542834856
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | current chi2=0.9485619542834856 (change=82.94316143239433 %)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,280 | INFO     | sum of square deviations: 1222992882.867092
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | sum of deviations: -1112068279.2468362
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | mean y: 2566050.474683544
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | intersect: 2566050.474683544
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | chi2: 0.047293023033222546
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | current chi2=0.047293023033222546 (change=95.01423994293063 %)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,281 | INFO     | sum of square deviations: 1110513305.3464038
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | sum of deviations: -4551018117.535947
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | mean y: 2570627.6535947714
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | intersect: 2570627.6535947714
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | chi2: 0.008727883543150789
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | current chi2=0.008727883543150789 (change=81.54509273594205 %)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | sum of square deviations: 1005159228.4527025
[2026-04-28 09:39:02] 2026-04-28 13:38:28,282 | INFO     | sum of deviations: -3821789534.8175673
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | mean y: 2569567.4797297297
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | intersect: 2569567.4797297297
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | chi2: 0.00854558716170276
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | current chi2=0.00854558716170276 (change=2.0886665197439163 %)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | left removable region: 20
[2026-04-28 09:39:02] 2026-04-28 13:38:28,283 | INFO     | sum of square deviations: 887787633.0492976
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | sum of deviations: -3608005843.035211
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | mean x (centered): 0.0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | mean y: 2569900.3169014086
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | intersect: 2569900.3169014086
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | chi2: 0.008466154655694412
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | current memory leak: -4.06 B/s (using 142 data points, chi2=0.01)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,315 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | ..............................
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . Timing measurements:
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . get job = 0 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . initial setup = 40 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . payload setup = 153 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . stage-in = 0 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . payload execution = 10272 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . stage-out = 2 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | . log creation = 0 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,316 | INFO     | ..............................
[2026-04-28 09:39:02] 2026-04-28 13:38:28,522 | INFO     | 
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | job summary report
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | --------------------------------------------------
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | PanDA job id: 7116401649
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | task id: 49820375
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | errors: (none)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | pilot state: finished 
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | transexitcode: 0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | exeerrorcode: 0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | exeerrordiag: 
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | exitcode: 0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | exitmsg: OK
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | cpuconsumptiontime: 40335 s
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | nevents: 400
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | neventsw: 0
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | pid: 4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | pgrp: 4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | corecount: 8
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | event service: False
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | sizes: {0: 2280703, 1: 2282532, 10429: 2311577, 10430: 2311576, 10434: 2320686, 10435: 2320888}
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | --------------------------------------------------
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | 
[2026-04-28 09:39:02] 2026-04-28 13:38:28,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-28 09:39:02] 2026-04-28 13:38:28,585 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 09:39:02] 2026-04-28 13:38:28,586 | INFO     | job 7116401649 has completed (purged errors)
[2026-04-28 09:39:02] 2026-04-28 13:38:28,587 | INFO     | overall cleanup function is called
[2026-04-28 09:39:02] 2026-04-28 13:38:29,594 | INFO     | --- collectZombieJob: --- 10, [4141678]
[2026-04-28 09:39:02] 2026-04-28 13:38:29,594 | INFO     | zombie collector waiting for pid 4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:29,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 09:39:02] 2026-04-28 13:38:29,594 | INFO     | collected zombie processes
[2026-04-28 09:39:02] 2026-04-28 13:38:29,594 | INFO     | will attempt to kill all subprocesses of pid=4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:30,604 | INFO     | process IDs to be killed: [4141678] (in reverse order)
[2026-04-28 09:39:02] 2026-04-28 13:38:30,871 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 09:39:02] 2026-04-28 13:38:30,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 09:39:02] 2026-04-28 13:38:30,975 | INFO     | did not find any defunct processes belonging to 4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:31,105 | INFO     | did not find any defunct processes belonging to 4141678
[2026-04-28 09:39:02] 2026-04-28 13:38:31,105 | INFO     | Ready for new job
[2026-04-28 09:39:02] 2026-04-28 13:38:31,106 | INFO     | ***************************************
[2026-04-28 09:39:02] 2026-04-28 13:38:31,106 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 09:39:02] 2026-04-28 13:38:31,106 | INFO     | ***************************************
[2026-04-28 09:39:02] 2026-04-28 13:38:31,107 | INFO     | 
[2026-04-28 09:39:02] 2026-04-28 13:38:31,162 | INFO     | architecture information:
[2026-04-28 09:39:02] 2026-04-28 13:38:31,162 | INFO     | executing command: cat /etc/os-release
[2026-04-28 09:39:02] 2026-04-28 13:38:31,186 | WARNING  | process 4141678 can no longer be monitored (due to stat problems) - aborting
[2026-04-28 09:39:02] 2026-04-28 13:38:31,240 | INFO     | cat /etc/os-release:
[2026-04-28 09:39:02] NAME="CentOS Linux"
[2026-04-28 09:39:02] VERSION="7 (Core)"
[2026-04-28 09:39:02] ID="centos"
[2026-04-28 09:39:02] ID_LIKE="rhel fedora"
[2026-04-28 09:39:02] VERSION_ID="7"
[2026-04-28 09:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 09:39:02] ANSI_COLOR="0;31"
[2026-04-28 09:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 09:39:02] HOME_URL="https://www.centos.org/"
[2026-04-28 09:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 09:39:02] 
[2026-04-28 09:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 09:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 09:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 09:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 09:39:02] 
[2026-04-28 09:39:02] 2026-04-28 13:38:31,240 | INFO     | ***************************************
[2026-04-28 09:39:02] 2026-04-28 13:38:31,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-28 09:39:02] 2026-04-28 13:38:31,810 | INFO     | sufficient remaining disk space (138696196096 B)
[2026-04-28 09:39:02] 2026-04-28 13:38:31,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 09:39:02] 2026-04-28 13:38:31,810 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 09:39:02] 2026-04-28 13:38:31,810 | INFO     | update_server=False
[2026-04-28 09:39:02] 2026-04-28 13:38:31,810 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 09:39:02] 2026-04-28 13:38:31,853 | INFO     | all data control threads have been joined
[2026-04-28 09:39:02] 2026-04-28 13:38:31,889 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 09:39:02] 2026-04-28 13:38:32,534 | INFO     | number of running child processes to parent process 4141678: 1
[2026-04-28 09:39:02] 2026-04-28 13:38:32,534 | INFO     | maximum number of monitored processes: 6
[2026-04-28 09:39:02] 2026-04-28 13:38:32,534 | INFO     | aborting job monitoring since job object (job id=7116401649) has expired
[2026-04-28 09:39:02] 2026-04-28 13:38:32,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:39:02] 2026-04-28 13:38:32,534 | INFO     | will abort loop
[2026-04-28 09:39:02] 2026-04-28 13:38:32,816 | INFO     | [job] retrieve thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:32,861 | INFO     | [data] control thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:32,970 | INFO     | [data] copytool_in thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:32,982 | INFO     | [job] validate thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,123 | INFO     | all payload control threads have been joined
[2026-04-28 09:39:02] 2026-04-28 13:38:33,146 | INFO     | [payload] validate_post thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 09:39:02] 2026-04-28 13:38:33,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,362 | INFO     | [payload] failed_post thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,392 | INFO     | all job control threads have been joined
[2026-04-28 09:39:02] 2026-04-28 13:38:33,424 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:39:02] 2026-04-28 13:38:33,540 | INFO     | [job] job monitor thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,870 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:33,939 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:34,129 | INFO     | [payload] control thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:34,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 09:39:02] 2026-04-28 13:38:34,398 | INFO     | [job] control thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:34,546 | INFO     | [job] queue monitor thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:35,178 | INFO     | [data] copytool_out thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:38,157 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 09:39:02] 2026-04-28 13:38:54,492 | INFO     | [monitor] cgroup control has ended
[2026-04-28 09:39:02] 2026-04-28 13:38:55,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641537185600)>', '<ExcThread(monitor, started 140640977413888)>']
[2026-04-28 09:39:02] 2026-04-28 13:39:00,039 | INFO     | all workflow threads have been joined
[2026-04-28 09:39:02] 2026-04-28 13:39:00,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 09:39:02] 2026-04-28 13:39:00,039 | INFO     | traces error code: 0
[2026-04-28 09:39:02] 2026-04-28 13:39:00,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 09:39:02] 2026-04-28 13:39:01,726 | INFO     | PID=4115217 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 09:39:02] 2026-04-28 13:39:01,726 | INFO     | .. there are 67 such processes running
[2026-04-28 09:39:02] 2026-04-28 13:39:01,729 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 09:39:02] 2026-04-28 13:39:01,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 09:39:02] 2026-04-28 13:39:01,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 09:39:02] 2026-04-28 13:39:01,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 09:39:02] 2026-04-28 13:39:01,729 | INFO     | [monitor] control thread has ended
[2026-04-28 09:39:02] 2026-04-28 13:39:02,037 [wrapper] ==== pilot stdout END ====
[2026-04-28 09:39:02] 2026-04-28 13:39:02,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 09:39:02] 2026-04-28 13:39:02,060 [wrapper] pilotpid: 4115217
[2026-04-28 09:39:02] 2026-04-28 13:39:02,074 [wrapper] Pilot exit status: 0
[2026-04-28 09:39:02] 2026-04-28 13:39:02,164 [wrapper] pandaids: 7116401649
[2026-04-28 09:39:02] 2026-04-28 13:39:02,601 [wrapper] cleanup supervisor_pilot 1700343 4115219
[2026-04-28 09:39:02] 2026-04-28 13:39:02,632 [wrapper] Test setup, not cleaning
[2026-04-28 09:39:02] 2026-04-28 13:39:02,659 [wrapper] apfmon messages muted
[2026-04-28 09:39:02] 2026-04-28 13:39:02,683 [wrapper] ==== wrapper stdout END ====
[2026-04-28 09:39:02] 2026-04-28 13:39:02,690 [wrapper] ==== wrapper stderr END ====
[2026-04-28 09:39:02]  *** Error codes and diagnostics ***
[2026-04-28 09:39:02]     "exeErrorCode": 0,
[2026-04-28 09:39:02]     "pilotErrorCode": 0,
[2026-04-28 09:39:02]  *** Listing of results directory ***
[2026-04-28 09:39:02] total 2443156
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas     683926 Apr 28 03:39 pilot3.tar.gz
[2026-04-28 09:39:02] -rwx------. 1 boincer umatlas      36322 Apr 28 03:53 runpilot2-wrapper.sh
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas       5631 Apr 28 03:53 queuedata.json
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas        100 Apr 28 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 09:39:02] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 28 06:42 run_atlas
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas        105 Apr 28 06:42 job.xml
[2026-04-28 09:39:02] -rw-r--r--. 2 boincer umatlas 2222467795 Apr 28 06:42 EVNT.49820373._000041.pool.root.1
[2026-04-28 09:39:02] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 06:42 start_atlas.sh
[2026-04-28 09:39:02] drwxrwx--x. 2 boincer umatlas       4096 Apr 28 06:42 shared
[2026-04-28 09:39:02] -rw-r--r--. 2 boincer umatlas     697419 Apr 28 06:42 input.tar.gz
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas          0 Apr 28 06:42 boinc_lockfile
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas       2580 Apr 28 06:42 pandaJob.out
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas         57 Apr 28 06:42 setup.sh.local
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas     992925 Apr 28 06:43 agis_schedconf.cvmfs.json
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas    1512704 Apr 28 06:43 agis_ddmendpoints.agis.ALL.json
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas        430 Apr 28 06:44 workernode_map.json
[2026-04-28 09:39:02] drwx------. 5 boincer umatlas       4096 Apr 28 06:44 pilot3
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas       7089 Apr 28 09:29 init_data.xml
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas  272686209 Apr 28 09:37 HITS.49820375._019306.pool.root.1
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas        489 Apr 28 09:37 boinc_task_state.xml
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas         95 Apr 28 09:38 pilot_heartbeat.json
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas       1054 Apr 28 09:38 memory_monitor_summary.json
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas     342172 Apr 28 09:38 log.49820375._019306.job.log.tgz.1
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas       6381 Apr 28 09:38 heartbeat_new.json
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas       6272 Apr 28 09:38 heartbeat.json
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas       8192 Apr 28 09:38 boinc_mmap_file
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas         27 Apr 28 09:38 wrapper_checkpoint.txt
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas        823 Apr 28 09:39 pilotlog.txt
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas     910351 Apr 28 09:39 log.49820375._019306.job.log.1
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas        357 Apr 28 09:39 output.list
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas        410 Apr 28 09:39 runtime_log
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas    1269760 Apr 28 09:39 result.tar.gz
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas       8960 Apr 28 09:39 runtime_log.err
[2026-04-28 09:39:02] -rw-------. 1 boincer umatlas        659 Apr 28 09:39 6777c530cd37.diag
[2026-04-28 09:39:02] -rw-r--r--. 1 boincer umatlas      21004 Apr 28 09:39 stderr.txt
[2026-04-28 09:39:03] HITS file was successfully produced:
[2026-04-28 09:39:03] -rw-------. 1 boincer umatlas 272686209 Apr 28 09:37 shared/HITS.pool.root.1
[2026-04-28 09:39:03]  *** Contents of shared directory: ***
[2026-04-28 09:39:03] total 2438624
[2026-04-28 09:39:03] -rw-r--r--. 2 boincer umatlas 2222467795 Apr 28 06:42 ATLAS.root_0
[2026-04-28 09:39:03] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 06:42 start_atlas.sh
[2026-04-28 09:39:03] -rw-r--r--. 2 boincer umatlas     697419 Apr 28 06:42 input.tar.gz
[2026-04-28 09:39:03] -rw-------. 1 boincer umatlas  272686209 Apr 28 09:37 HITS.pool.root.1
[2026-04-28 09:39:03] -rw-------. 1 boincer umatlas    1269760 Apr 28 09:39 result.tar.gz
09:39:04 (4102831): run_atlas exited; CPU time 40660.647351
09:39:04 (4102831): called boinc_finish(0)

</stderr_txt>
]]>

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