Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:03 (1345750): wrapper (7.7.26015): starting
05:49:03 (1345750): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 05:49:03] Arguments: --nthreads 8
[2026-04-28 05:49:03] Threads: 8
[2026-04-28 05:49:03] Checking for CVMFS
[2026-04-28 05:49:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 05:49:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 05:49:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 05:49:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 05:49:04] 2.13.3.0 2282030 118869 295836 158961 0 879 25513759 32935936 28521 16776704 0 514400264 99.638 496245156 30383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-28 05:49:04] CVMFS is ok
[2026-04-28 05:49:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 05:49:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 05:49:04] Further information can be found at the LHC@home message board.
[2026-04-28 05:49:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 05:49:04] Checking for apptainer binary...
[2026-04-28 05:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 05:49:05] Running /usr/bin/apptainer --version
[2026-04-28 05:49:05] apptainer version 1.4.5-3.el9
[2026-04-28 05:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 05:49:05] c6-12-27-1.aglt2.org
[2026-04-28 05:49:05] apptainer works
[2026-04-28 05:49:05] Set ATHENA_PROC_NUMBER=8
[2026-04-28 05:49:05] Set ATHENA_CORE_NUMBER=8
[2026-04-28 05:49:05] Starting ATLAS job with PandaID=7116401828
[2026-04-28 05:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 13:58:16]  *** The last 200 lines of the pilot log: ***
[2026-04-28 13:58:16] 2026-04-28 17:57:21,897 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 13:58:16] 2026-04-28 17:57:21,897 | INFO     | log transfer has been attempted: DONE
[2026-04-28 13:58:16] 2026-04-28 17:57:21,897 | INFO     | job 7116401828 has finished - writing final server update
[2026-04-28 13:58:16] 2026-04-28 17:57:21,923 | INFO     | total number of processed events: 400 (read)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,025 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7116401828/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,026 | INFO     | extracted standard info from prmon json
[2026-04-28 13:58:16] 2026-04-28 17:57:22,026 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 13:58:16] 2026-04-28 17:57:22,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 13:58:16] 2026-04-28 17:57:22,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 13:58:16] 2026-04-28 17:57:22,076 | INFO     | fitting pss+swap vs Time
[2026-04-28 13:58:16] 2026-04-28 17:57:22,100 | INFO     | sum of square deviations: 33863940027.790707
[2026-04-28 13:58:16] 2026-04-28 17:57:22,123 | INFO     | sum of deviations: 116310118217.65286
[2026-04-28 13:58:16] 2026-04-28 17:57:22,124 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,124 | INFO     | mean y: 2535052.1652719667
[2026-04-28 13:58:16] 2026-04-28 17:57:22,124 | INFO     | intersect: 2535052.1652719667
[2026-04-28 13:58:16] 2026-04-28 17:57:22,125 | INFO     | chi2: 3.0427429684507725
[2026-04-28 13:58:16] 2026-04-28 17:57:22,143 | INFO     | sum of square deviations: 32812323786.097225
[2026-04-28 13:58:16] 2026-04-28 17:57:22,166 | INFO     | sum of deviations: 147304383270.42035
[2026-04-28 13:58:16] 2026-04-28 17:57:22,167 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,167 | INFO     | mean y: 2539506.5200845664
[2026-04-28 13:58:16] 2026-04-28 17:57:22,167 | INFO     | intersect: 2539506.5200845664
[2026-04-28 13:58:16] 2026-04-28 17:57:22,168 | INFO     | chi2: 2.261015061609982
[2026-04-28 13:58:16] 2026-04-28 17:57:22,168 | INFO     | current chi2=2.261015061609982 (change=25.691552488865373 %)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,169 | INFO     | sum of square deviations: 31782707712.89535
[2026-04-28 13:58:16] 2026-04-28 17:57:22,202 | INFO     | sum of deviations: 145182249814.28632
[2026-04-28 13:58:16] 2026-04-28 17:57:22,202 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,202 | INFO     | mean y: 2539192.183760684
[2026-04-28 13:58:16] 2026-04-28 17:57:22,203 | INFO     | intersect: 2539192.183760684
[2026-04-28 13:58:16] 2026-04-28 17:57:22,203 | INFO     | chi2: 2.2613039468051985
[2026-04-28 13:58:16] 2026-04-28 17:57:22,203 | INFO     | current chi2=2.2613039468051985 (change=-0.012776792163906333 %)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,204 | INFO     | right removable region: 467
[2026-04-28 13:58:16] 2026-04-28 17:57:22,204 | INFO     | sum of square deviations: 32812242168.0972
[2026-04-28 13:58:16] 2026-04-28 17:57:22,266 | INFO     | sum of deviations: 9025617323.027443
[2026-04-28 13:58:16] 2026-04-28 17:57:22,267 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,267 | INFO     | mean y: 2550562.179704017
[2026-04-28 13:58:16] 2026-04-28 17:57:22,267 | INFO     | intersect: 2550562.179704017
[2026-04-28 13:58:16] 2026-04-28 17:57:22,268 | INFO     | chi2: 0.8795591755860804
[2026-04-28 13:58:16] 2026-04-28 17:57:22,268 | INFO     | current chi2=0.8795591755860804 (change=71.09321475044236 %)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,268 | INFO     | sum of square deviations: 31782602670.82688
[2026-04-28 13:58:16] 2026-04-28 17:57:22,376 | INFO     | sum of deviations: -9888738545.134602
[2026-04-28 13:58:16] 2026-04-28 17:57:22,376 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,377 | INFO     | mean y: 2553359.3183760685
[2026-04-28 13:58:16] 2026-04-28 17:57:22,377 | INFO     | intersect: 2553359.3183760685
[2026-04-28 13:58:16] 2026-04-28 17:57:22,377 | INFO     | chi2: 0.8241016270655878
[2026-04-28 13:58:16] 2026-04-28 17:57:22,378 | INFO     | current chi2=0.8241016270655878 (change=6.305152633253972 %)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,378 | INFO     | left removable region: 10
[2026-04-28 13:58:16] 2026-04-28 17:57:22,378 | INFO     | sum of square deviations: 29593747232.183834
[2026-04-28 13:58:16] 2026-04-28 17:57:22,397 | INFO     | sum of deviations: 20849280295.831505
[2026-04-28 13:58:16] 2026-04-28 17:57:22,397 | INFO     | mean x (centered): 0.0
[2026-04-28 13:58:16] 2026-04-28 17:57:22,398 | INFO     | mean y: 2557964.969365427
[2026-04-28 13:58:16] 2026-04-28 17:57:22,398 | INFO     | intersect: 2557964.969365427
[2026-04-28 13:58:16] 2026-04-28 17:57:22,431 | INFO     | chi2: 0.029335647962401398
[2026-04-28 13:58:16] 2026-04-28 17:57:22,435 | INFO     | current memory leak: 0.70 B/s (using 457 data points, chi2=0.03)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,436 | INFO     | could have reported an average CPU frequency of 2724 MHz (20 samples)
[2026-04-28 13:58:16] 2026-04-28 17:57:22,436 | INFO     | ..............................
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . Timing measurements:
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . get job = 0 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . initial setup = 27 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . payload setup = 46 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . stage-in = 0 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . payload execution = 29160 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . stage-out = 6 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | . log creation = 0 s
[2026-04-28 13:58:16] 2026-04-28 17:57:22,437 | INFO     | ..............................
[2026-04-28 13:58:16] 2026-04-28 17:57:23,364 | INFO     | 
[2026-04-28 13:58:16] 2026-04-28 17:57:23,364 | INFO     | job summary report
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | --------------------------------------------------
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | PanDA job id: 7116401828
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | task id: 49820375
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | errors: (none)
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | pilot state: finished 
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | transexitcode: 0
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | exeerrorcode: 0
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | exeerrordiag: 
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | exitcode: 0
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | exitmsg: OK
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | cpuconsumptiontime: 76118 s
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | nevents: 400
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | neventsw: 0
[2026-04-28 13:58:16] 2026-04-28 17:57:23,365 | INFO     | pid: 1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | pgrp: 1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | corecount: 8
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | event service: False
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | sizes: {0: 2280715, 1: 2282544, 29212: 2320183, 29213: 2320182, 29221: 2329236, 29225: 2329292, 29227: 2329614}
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | --------------------------------------------------
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | 
[2026-04-28 13:58:16] 2026-04-28 17:57:23,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 13:58:16] 2026-04-28 17:57:23,494 | INFO     | job 7116401828 has completed (purged errors)
[2026-04-28 13:58:16] 2026-04-28 17:57:23,495 | INFO     | overall cleanup function is called
[2026-04-28 13:58:16] 2026-04-28 17:57:24,564 | INFO     | --- collectZombieJob: --- 10, [1363888]
[2026-04-28 13:58:16] 2026-04-28 17:57:24,564 | INFO     | zombie collector waiting for pid 1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:24,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 13:58:16] 2026-04-28 17:57:24,565 | INFO     | collected zombie processes
[2026-04-28 13:58:16] 2026-04-28 17:57:24,565 | INFO     | will attempt to kill all subprocesses of pid=1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:25,616 | INFO     | PID=1350518 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-28 13:58:16] 2026-04-28 17:57:25,616 | INFO     | .. there are 31 such processes running
[2026-04-28 13:58:16] 2026-04-28 17:57:27,745 | INFO     | process IDs to be killed: [1363888] (in reverse order)
[2026-04-28 13:58:16] 2026-04-28 17:57:27,945 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 13:58:16] 2026-04-28 17:57:27,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 13:58:16] 2026-04-28 17:57:27,968 | INFO     | did not find any defunct processes belonging to 1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:27,988 | INFO     | did not find any defunct processes belonging to 1363888
[2026-04-28 13:58:16] 2026-04-28 17:57:27,992 | INFO     | Ready for new job
[2026-04-28 13:58:16] 2026-04-28 17:57:27,994 | INFO     | ***************************************
[2026-04-28 13:58:16] 2026-04-28 17:57:27,994 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 13:58:16] 2026-04-28 17:57:27,994 | INFO     | ***************************************
[2026-04-28 13:58:16] 2026-04-28 17:57:27,994 | INFO     | 
[2026-04-28 13:58:16] 2026-04-28 17:57:28,020 | INFO     | architecture information:
[2026-04-28 13:58:16] 2026-04-28 17:57:28,027 | INFO     | executing command: cat /etc/os-release
[2026-04-28 13:58:16] 2026-04-28 17:57:28,104 | INFO     | cat /etc/os-release:
[2026-04-28 13:58:16] NAME="CentOS Linux"
[2026-04-28 13:58:16] VERSION="7 (Core)"
[2026-04-28 13:58:16] ID="centos"
[2026-04-28 13:58:16] ID_LIKE="rhel fedora"
[2026-04-28 13:58:16] VERSION_ID="7"
[2026-04-28 13:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 13:58:16] ANSI_COLOR="0;31"
[2026-04-28 13:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 13:58:16] HOME_URL="https://www.centos.org/"
[2026-04-28 13:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 13:58:16] 
[2026-04-28 13:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 13:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 13:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 13:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 13:58:16] 
[2026-04-28 13:58:16] 2026-04-28 17:57:28,105 | INFO     | ***************************************
[2026-04-28 13:58:16] 2026-04-28 17:57:28,608 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-28 13:58:16] 2026-04-28 17:57:28,664 | INFO     | sufficient remaining disk space (82138103808 B)
[2026-04-28 13:58:16] 2026-04-28 17:57:28,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 13:58:16] 2026-04-28 17:57:28,665 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 13:58:16] 2026-04-28 17:57:28,665 | INFO     | update_server=False
[2026-04-28 13:58:16] 2026-04-28 17:57:28,665 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 13:58:16] 2026-04-28 17:57:28,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 13:58:16] 2026-04-28 17:57:28,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 13:58:16] 2026-04-28 17:57:28,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 13:58:16] 2026-04-28 17:57:28,858 | INFO     | aborting loop
[2026-04-28 13:58:16] 2026-04-28 17:57:29,078 | INFO     | all data control threads have been joined
[2026-04-28 13:58:16] 2026-04-28 17:57:29,677 | INFO     | [job] retrieve thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,678 | INFO     | [job] queue monitor thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,681 | INFO     | [job] validate thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,690 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,691 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:29,864 | INFO     | [job] job monitor thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:30,084 | INFO     | [data] control thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:30,101 | INFO     | all job control threads have been joined
[2026-04-28 13:58:16] 2026-04-28 17:57:30,126 | INFO     | all payload control threads have been joined
[2026-04-28 13:58:16] 2026-04-28 17:57:30,477 | INFO     | [payload] failed_post thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:30,523 | INFO     | [payload] validate_post thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:30,683 | INFO     | [data] copytool_out thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:30,969 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:31,074 | INFO     | [data] copytool_in thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:31,109 | INFO     | [job] control thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:31,132 | INFO     | [payload] control thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:32,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 13:58:16] 2026-04-28 17:57:36,090 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 13:58:16] 2026-04-28 17:57:59,661 | INFO     | PID=1350518 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 13:58:16] 2026-04-28 17:57:59,662 | INFO     | .. there are 31 such processes running
[2026-04-28 13:58:16] 2026-04-28 17:57:59,662 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 13:58:16] 2026-04-28 17:57:59,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 13:58:16] 2026-04-28 17:57:59,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 13:58:16] 2026-04-28 17:58:07,873 | INFO     | [monitor] cgroup control has ended
[2026-04-28 13:58:16] 2026-04-28 17:58:08,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226337773376)>', '<ExcThread(monitor, started 140225640654592)>']
[2026-04-28 13:58:16] 2026-04-28 17:58:08,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 13:58:16] 2026-04-28 17:58:08,715 | INFO     | [monitor] control thread has ended
[2026-04-28 13:58:16] 2026-04-28 17:58:13,452 | INFO     | all workflow threads have been joined
[2026-04-28 13:58:16] 2026-04-28 17:58:13,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 13:58:16] 2026-04-28 17:58:13,453 | INFO     | traces error code: 0
[2026-04-28 13:58:16] 2026-04-28 17:58:13,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 13:58:16] 2026-04-28 17:58:14,996 [wrapper] ==== pilot stdout END ====
[2026-04-28 13:58:16] 2026-04-28 17:58:15,005 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 13:58:16] 2026-04-28 17:58:15,008 [wrapper] pilotpid: 1350518
[2026-04-28 13:58:16] 2026-04-28 17:58:15,011 [wrapper] Pilot exit status: 0
[2026-04-28 13:58:16] 2026-04-28 17:58:15,083 [wrapper] pandaids: 7116401828
[2026-04-28 13:58:16] 2026-04-28 17:58:15,517 [wrapper] cleanup supervisor_pilot 3140641 1350519
[2026-04-28 13:58:16] 2026-04-28 17:58:15,562 [wrapper] Test setup, not cleaning
[2026-04-28 13:58:16] 2026-04-28 17:58:15,592 [wrapper] apfmon messages muted
[2026-04-28 13:58:16] 2026-04-28 17:58:15,596 [wrapper] ==== wrapper stdout END ====
[2026-04-28 13:58:16] 2026-04-28 17:58:15,598 [wrapper] ==== wrapper stderr END ====
[2026-04-28 13:58:16]  *** Error codes and diagnostics ***
[2026-04-28 13:58:16]     "exeErrorCode": 0,
[2026-04-28 13:58:16]     "pilotErrorCode": 0,
[2026-04-28 13:58:16]  *** Listing of results directory ***
[2026-04-28 13:58:16] total 2462032
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas     683926 Apr 28 03:39 pilot3.tar.gz
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas       5631 Apr 28 03:53 queuedata.json
[2026-04-28 13:58:16] -rwx------. 1 boincer umatlas      36322 Apr 28 03:53 runpilot2-wrapper.sh
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas        100 Apr 28 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 13:58:16] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 28 05:48 run_atlas
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas        105 Apr 28 05:48 job.xml
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas 2239823717 Apr 28 05:49 EVNT.49820373._000066.pool.root.1
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 05:49 start_atlas.sh
[2026-04-28 13:58:16] drwxrwx--x. 2 boincer umatlas       4096 Apr 28 05:49 shared
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas     697415 Apr 28 05:49 input.tar.gz
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas          0 Apr 28 05:49 boinc_lockfile
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas       2586 Apr 28 05:49 pandaJob.out
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas         57 Apr 28 05:49 setup.sh.local
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas     992901 Apr 28 05:49 agis_schedconf.cvmfs.json
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas        443 Apr 28 05:50 workernode_map.json
[2026-04-28 13:58:16] drwx------. 5 boincer umatlas       4096 Apr 28 05:50 pilot3
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas  271169819 Apr 28 13:55 HITS.49820375._019485.pool.root.1
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas       6795 Apr 28 13:56 init_data.xml
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas        489 Apr 28 13:56 boinc_task_state.xml
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas       1057 Apr 28 13:57 memory_monitor_summary.json
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas    1512704 Apr 28 13:57 agis_ddmendpoints.agis.ALL.json
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas     623521 Apr 28 13:57 log.49820375._019485.job.log.tgz.1
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas       6443 Apr 28 13:57 heartbeat_new.json
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas       6334 Apr 28 13:57 heartbeat.json
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas         95 Apr 28 13:57 pilot_heartbeat.json
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas         28 Apr 28 13:58 wrapper_checkpoint.txt
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas       4823 Apr 28 13:58 pilotlog.txt
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas    2372252 Apr 28 13:58 log.49820375._019485.job.log.1
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas        357 Apr 28 13:58 output.list
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas        410 Apr 28 13:58 runtime_log
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas    3010560 Apr 28 13:58 result.tar.gz
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas       8975 Apr 28 13:58 runtime_log.err
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas        665 Apr 28 13:58 6778d60463f7.diag
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas       8192 Apr 28 13:58 boinc_mmap_file
[2026-04-28 13:58:16] -rw-r--r--. 1 boincer umatlas      21146 Apr 28 13:58 stderr.txt
[2026-04-28 13:58:16] HITS file was successfully produced:
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas 271169819 Apr 28 13:55 shared/HITS.pool.root.1
[2026-04-28 13:58:16]  *** Contents of shared directory: ***
[2026-04-28 13:58:16] total 2455792
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas 2239823717 Apr 28 05:49 ATLAS.root_0
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 05:49 start_atlas.sh
[2026-04-28 13:58:16] -rw-r--r--. 2 boincer umatlas     697415 Apr 28 05:49 input.tar.gz
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas  271169819 Apr 28 13:55 HITS.pool.root.1
[2026-04-28 13:58:16] -rw-------. 1 boincer umatlas    3010560 Apr 28 13:58 result.tar.gz
13:58:17 (1345750): run_atlas exited; CPU time 77281.969969
13:58:17 (1345750): called boinc_finish(0)

</stderr_txt>
]]>

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