Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:29:08 (2957563): wrapper (7.7.26015): starting
01:29:08 (2957563): wrapper: running run_atlas (--nthreads 12)
[2026-04-29 01:29:08] Arguments: --nthreads 12
[2026-04-29 01:29:08] Threads: 12
[2026-04-29 01:29:08] Checking for CVMFS
[2026-04-29 01:29:08] No cvmfs_config command found, will try listing directly
[2026-04-29 01:29:08] CVMFS is ok
[2026-04-29 01:29:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 01:29:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 01:29:08] Further information can be found at the LHC@home message board.
[2026-04-29 01:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 01:29:08] Checking for apptainer binary...
[2026-04-29 01:29:08] which: no apptainer in ((null))
[2026-04-29 01:29:08] apptainer is not installed, using version from CVMFS
[2026-04-29 01:29:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 01:29:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-04-29 01:29:08] apptainer works
[2026-04-29 01:29:08] Set ATHENA_PROC_NUMBER=12
[2026-04-29 01:29:08] Set ATHENA_CORE_NUMBER=12
[2026-04-29 01:29:08] Starting ATLAS job with PandaID=7105352265
[2026-04-29 01:29:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 02:17:29]  *** The last 200 lines of the pilot log: ***
[2026-04-29 02:17:29]  direct_access_lan=False
[2026-04-29 02:17:29]  direct_access_wan=False
[2026-04-29 02:17:29]  domain=
[2026-04-29 02:17:29]  filesize=340496
[2026-04-29 02:17:29]  filetype=log
[2026-04-29 02:17:29]  guid=de841439-49cd-4fa3-8701-0b5a078797b6
[2026-04-29 02:17:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-29 02:17:29]  is_altstaged=None
[2026-04-29 02:17:29]  is_tar=False
[2026-04-29 02:17:29]  lfn=log.49820244._014442.job.log.tgz.1
[2026-04-29 02:17:29]  mtime=0
[2026-04-29 02:17:29]  protocol_id=None
[2026-04-29 02:17:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-29 02:17:29]  replicas=None
[2026-04-29 02:17:29]  scope=mc23_13p6TeV
[2026-04-29 02:17:29]  status=None
[2026-04-29 02:17:29]  status_code=0
[2026-04-29 02:17:29]  storage_token=
[2026-04-29 02:17:29]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7105352265/log.49820244._014442.job.log.tgz.1
[2026-04-29 02:17:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/43/log.49820244._014442.job.log.tgz.1
[2026-04-29 02:17:29]  workdir=None
[2026-04-29 02:17:29] ]
[2026-04-29 02:17:29] 2026-04-29 00:16:52,151 | INFO     | transferring file log.49820244._014442.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7105352265/log.49820244._014442.job.log.tgz.1 to /var/lib/
[2026-04-29 02:17:29] 2026-04-29 00:16:52,151 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7105352265/log.49820244._014442.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-29 02:17:29] 2026-04-29 00:16:52,166 | INFO     | adding to output.list: log.49820244._014442.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/43/log.49820244._014442.job.log.tg
[2026-04-29 02:17:29] 2026-04-29 00:16:52,167 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-29 02:17:29] 2026-04-29 00:16:52,167 | INFO     | summary of transferred files:
[2026-04-29 02:17:29] 2026-04-29 00:16:52,167 | INFO     |  -- lfn=log.49820244._014442.job.log.tgz.1, status_code=0, status=transferred
[2026-04-29 02:17:29] 2026-04-29 00:16:52,167 | INFO     | stage-out finished correctly
[2026-04-29 02:17:29] 2026-04-29 00:16:52,504 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-29 02:17:29] 2026-04-29 00:16:53,475 | INFO     | monitor loop #215: job 0:7105352265 is in state 'finished'
[2026-04-29 02:17:29] 2026-04-29 00:16:53,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,141 | INFO     | job 7105352265 has state=finished
[2026-04-29 02:17:29] 2026-04-29 00:16:54,141 | INFO     | preparing for final server update for job 7105352265 in state='finished'
[2026-04-29 02:17:29] 2026-04-29 00:16:54,141 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7105352265/jobReport.json
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | INFO     | this job has now completed (state=finished)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | INFO     | log transfer has been attempted: DONE
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | INFO     | job 7105352265 has finished - writing final server update
[2026-04-29 02:17:29] 2026-04-29 00:16:54,143 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1901177/.job.ad'
[2026-04-29 02:17:29] 2026-04-29 00:16:54,144 | INFO     | total number of processed events: 400 (read)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,161 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7105352265/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,161 | INFO     | extracted standard info from prmon json
[2026-04-29 02:17:29] 2026-04-29 00:16:54,161 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 02:17:29] 2026-04-29 00:16:54,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 02:17:29] 2026-04-29 00:16:54,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 02:17:29] 2026-04-29 00:16:54,162 | INFO     | fitting pss+swap vs Time
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | sum of square deviations: 19832930.0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | sum of deviations: 429724870.0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | mean x (centered): 0.0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | mean y: 2794682.3
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | intersect: 2794682.3
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | chi2: 0.0007964800167153211
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | current memory leak: 21.67 B/s (using 40 data points, chi2=0.00)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | could have reported an average CPU frequency of 3622 MHz (5 samples)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | ..............................
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . Timing measurements:
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . get job = 0 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . initial setup = 4 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . payload setup = 6 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . stage-in = 0 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . payload execution = 2829 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . stage-out = 0 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | . log creation = 0 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,163 | INFO     | ..............................
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | 
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | job summary report
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | --------------------------------------------------
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | PanDA job id: 7105352265
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | task id: 49820244
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | errors: (none)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | pilot state: finished 
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | transexitcode: 0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | exeerrorcode: 0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | exeerrordiag: 
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | exitcode: 0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | exitmsg: OK
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | cpuconsumptiontime: 30062 s
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | nevents: 400
[2026-04-29 02:17:29] 2026-04-29 00:16:54,212 | INFO     | neventsw: 0
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | pid: 2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | pgrp: 2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | corecount: 12
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | event service: False
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | sizes: {0: 2282439, 11: 2282439, 2839: 2307816, 2841: 2316894, 2843: 2317064}
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | --------------------------------------------------
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | 
[2026-04-29 02:17:29] 2026-04-29 00:16:54,213 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-29 02:17:29] 2026-04-29 00:16:54,230 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | job 7105352265 has completed (purged errors)
[2026-04-29 02:17:29] 2026-04-29 00:16:54,231 | INFO     | overall cleanup function is called
[2026-04-29 02:17:29] 2026-04-29 00:16:55,238 | INFO     | --- collectZombieJob: --- 10, [2967921]
[2026-04-29 02:17:29] 2026-04-29 00:16:55,239 | INFO     | zombie collector waiting for pid 2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:55,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 02:17:29] 2026-04-29 00:16:55,239 | INFO     | collected zombie processes
[2026-04-29 02:17:29] 2026-04-29 00:16:55,239 | INFO     | will attempt to kill all subprocesses of pid=2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:55,524 | INFO     | process IDs to be killed: [2967921] (in reverse order)
[2026-04-29 02:17:29] 2026-04-29 00:16:55,672 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 02:17:29] 2026-04-29 00:16:55,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 02:17:29] 2026-04-29 00:16:55,696 | INFO     | did not find any defunct processes belonging to 2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:55,717 | INFO     | did not find any defunct processes belonging to 2967921
[2026-04-29 02:17:29] 2026-04-29 00:16:55,717 | INFO     | Ready for new job
[2026-04-29 02:17:29] 2026-04-29 00:16:55,718 | INFO     | ***************************************
[2026-04-29 02:17:29] 2026-04-29 00:16:55,718 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 02:17:29] 2026-04-29 00:16:55,718 | INFO     | ***************************************
[2026-04-29 02:17:29] 2026-04-29 00:16:55,718 | INFO     | 
[2026-04-29 02:17:29] 2026-04-29 00:16:55,724 | INFO     | architecture information:
[2026-04-29 02:17:29] 2026-04-29 00:16:55,724 | INFO     | executing command: cat /etc/os-release
[2026-04-29 02:17:29] 2026-04-29 00:16:55,739 | INFO     | cat /etc/os-release:
[2026-04-29 02:17:29] NAME="CentOS Linux"
[2026-04-29 02:17:29] VERSION="7 (Core)"
[2026-04-29 02:17:29] ID="centos"
[2026-04-29 02:17:29] ID_LIKE="rhel fedora"
[2026-04-29 02:17:29] VERSION_ID="7"
[2026-04-29 02:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 02:17:29] ANSI_COLOR="0;31"
[2026-04-29 02:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 02:17:29] HOME_URL="https://www.centos.org/"
[2026-04-29 02:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 02:17:29] 
[2026-04-29 02:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 02:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 02:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 02:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 02:17:29] 
[2026-04-29 02:17:29] 2026-04-29 00:16:55,739 | INFO     | ***************************************
[2026-04-29 02:17:29] 2026-04-29 00:16:56,242 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-29 02:17:29] 2026-04-29 00:16:56,258 | INFO     | sufficient remaining disk space (24375197696 B)
[2026-04-29 02:17:29] 2026-04-29 00:16:56,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 02:17:29] 2026-04-29 00:16:56,259 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 02:17:29] 2026-04-29 00:16:56,259 | INFO     | update_server=False
[2026-04-29 02:17:29] 2026-04-29 00:16:56,259 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 02:17:29] 2026-04-29 00:16:56,560 | INFO     | all payload control threads have been joined
[2026-04-29 02:17:29] 2026-04-29 00:16:56,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:17:29] 2026-04-29 00:16:56,983 | INFO     | aborting loop
[2026-04-29 02:17:29] 2026-04-29 00:16:57,160 | INFO     | all data control threads have been joined
[2026-04-29 02:17:29] 2026-04-29 00:16:57,264 | INFO     | [job] retrieve thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,397 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,502 | INFO     | [job] validate thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,565 | INFO     | [payload] control thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,698 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,720 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 02:17:29] 2026-04-29 00:16:57,775 | INFO     | all job control threads have been joined
[2026-04-29 02:17:29] 2026-04-29 00:16:57,947 | INFO     | [payload] validate_post thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,985 | INFO     | [data] copytool_in thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:57,988 | INFO     | [job] job monitor thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:58,165 | INFO     | [data] control thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:58,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:58,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 02:17:29] 2026-04-29 00:16:58,777 | INFO     | [job] control thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:58,865 | INFO     | [payload] failed_post thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:16:59,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:17:29] 2026-04-29 00:16:59,729 | INFO     | [data] copytool_out thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:17:00,227 | INFO     | [job] queue monitor thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:17:02,560 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 02:17:29] 2026-04-29 00:17:23,961 | INFO     | [monitor] cgroup control has ended
[2026-04-29 02:17:29] 2026-04-29 00:17:24,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22642756687680)>', '<ExcThread(monitor, started 22642455197440)>']
[2026-04-29 02:17:29] 2026-04-29 00:17:27,378 | INFO     | PID=2962120 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 02:17:29] 2026-04-29 00:17:27,379 | INFO     | .. there are 12 such processes running
[2026-04-29 02:17:29] 2026-04-29 00:17:27,380 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 02:17:29] 2026-04-29 00:17:27,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 02:17:29] 2026-04-29 00:17:27,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 02:17:29] 2026-04-29 00:17:27,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 02:17:29] 2026-04-29 00:17:27,380 | INFO     | [monitor] control thread has ended
[2026-04-29 02:17:29] 2026-04-29 00:17:29,224 | INFO     | all workflow threads have been joined
[2026-04-29 02:17:29] 2026-04-29 00:17:29,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 02:17:29] 2026-04-29 00:17:29,224 | INFO     | traces error code: 0
[2026-04-29 02:17:29] 2026-04-29 00:17:29,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 02:17:29] 2026-04-29 00:17:29,367 [wrapper] ==== pilot stdout END ====
[2026-04-29 02:17:29] 2026-04-29 00:17:29,369 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 02:17:29] 2026-04-29 00:17:29,370 [wrapper] pilotpid: 2962120
[2026-04-29 02:17:29] 2026-04-29 00:17:29,375 [wrapper] Pilot exit status: 0
[2026-04-29 02:17:29] 2026-04-29 00:17:29,382 [wrapper] pandaids: 7105352265
[2026-04-29 02:17:29] 2026-04-29 00:17:29,483 [wrapper] cleanup supervisor_pilot 3228925 2962121
[2026-04-29 02:17:29] 2026-04-29 00:17:29,485 [wrapper] Test setup, not cleaning
[2026-04-29 02:17:29] 2026-04-29 00:17:29,487 [wrapper] apfmon messages muted
[2026-04-29 02:17:29] 2026-04-29 00:17:29,488 [wrapper] ==== wrapper stdout END ====
[2026-04-29 02:17:29] 2026-04-29 00:17:29,490 [wrapper] ==== wrapper stderr END ====
[2026-04-29 02:17:29]  *** Error codes and diagnostics ***
[2026-04-29 02:17:29]     "exeErrorCode": 0,
[2026-04-29 02:17:29]     "pilotErrorCode": 0,
[2026-04-29 02:17:29]  *** Listing of results directory ***
[2026-04-29 02:17:29] total 2479296
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc     683926 Apr 28 07:29 pilot3.tar.gz
[2026-04-29 02:17:29] -rwx------. 1 boinc boinc      36322 Apr 28 07:36 runpilot2-wrapper.sh
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc       5631 Apr 28 07:37 queuedata.json
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc        100 Apr 29 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 02:17:29] -rwxr-xr-x. 1 boinc boinc       7986 Apr 29 01:29 run_atlas
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc        105 Apr 29 01:29 job.xml
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc 2255848660 Apr 29 01:29 EVNT.49820242._000030.pool.root.1
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc      15667 Apr 29 01:29 start_atlas.sh
[2026-04-29 02:17:29] drwxrwx--x. 2 boinc boinc       4096 Apr 29 01:29 shared
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc     697409 Apr 29 01:29 input.tar.gz
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc       6630 Apr 29 01:29 init_data.xml
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc          0 Apr 29 01:29 boinc_lockfile
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc       2550 Apr 29 01:29 pandaJob.out
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc    1001138 Apr 29 01:29 agis_schedconf.cvmfs.json
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc    1512704 Apr 29 01:29 agis_ddmendpoints.agis.ALL.json
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc        445 Apr 29 01:29 workernode_map.json
[2026-04-29 02:17:29] drwx------. 5 boinc boinc       4096 Apr 29 01:29 pilot3
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc  277504949 Apr 29 02:16 HITS.49820244._014442.pool.root.1
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc        489 Apr 29 02:16 boinc_task_state.xml
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc       1033 Apr 29 02:16 memory_monitor_summary.json
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc     340496 Apr 29 02:16 log.49820244._014442.job.log.tgz.1
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc       6377 Apr 29 02:16 heartbeat_new.json
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc       6268 Apr 29 02:16 heartbeat.json
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc         27 Apr 29 02:17 wrapper_checkpoint.txt
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc       8192 Apr 29 02:17 boinc_mmap_file
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc         95 Apr 29 02:17 pilot_heartbeat.json
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc       4833 Apr 29 02:17 pilotlog.txt
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc     310225 Apr 29 02:17 log.49820244._014442.job.log.1
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc        357 Apr 29 02:17 output.list
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc        410 Apr 29 02:17 runtime_log
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc     665600 Apr 29 02:17 result.tar.gz
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc       8846 Apr 29 02:17 runtime_log.err
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc        661 Apr 29 02:17 476b7459b2e1.diag
[2026-04-29 02:17:29] -rw-r--r--. 1 boinc boinc      20762 Apr 29 02:17 stderr.txt
[2026-04-29 02:17:29] HITS file was successfully produced:
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc 277504949 Apr 29 02:16 shared/HITS.pool.root.1
[2026-04-29 02:17:29]  *** Contents of shared directory: ***
[2026-04-29 02:17:29] total 2475344
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc 2255848660 Apr 29 01:29 ATLAS.root_0
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc      15667 Apr 29 01:29 start_atlas.sh
[2026-04-29 02:17:29] -rw-r--r--. 2 boinc boinc     697409 Apr 29 01:29 input.tar.gz
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc  277504949 Apr 29 02:16 HITS.pool.root.1
[2026-04-29 02:17:29] -rw-------. 1 boinc boinc     665600 Apr 29 02:17 result.tar.gz
02:17:30 (2957563): run_atlas exited; CPU time 30155.286395
02:17:30 (2957563): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN