Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:01 (14174): wrapper (7.7.26015): starting
00:08:01 (14174): wrapper: running run_atlas (--nthreads 8)
[2026-04-29 00:08:01] Arguments: --nthreads 8
[2026-04-29 00:08:01] Threads: 8
[2026-04-29 00:08:01] Checking for CVMFS
[2026-04-29 00:08:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 00:08:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 00:08:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 00:08:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 00:08:07] 2.11.2.0 23719 19021 102284 158982 0 54 24683446 25165825 96 130560 0 5115056 99.904 4577791 10152 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-29 00:08:07] CVMFS is ok
[2026-04-29 00:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 00:08:08] Checking for apptainer binary...
[2026-04-29 00:08:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 00:08:08] Running /usr/bin/apptainer --version
[2026-04-29 00:08:08] apptainer version 1.3.2-1.el7
[2026-04-29 00:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 00:08:36] cg-vwn408.simple-grid.lan
[2026-04-29 00:08:36] apptainer works
[2026-04-29 00:08:36] Set ATHENA_PROC_NUMBER=8
[2026-04-29 00:08:36] Set ATHENA_CORE_NUMBER=8
[2026-04-29 00:08:36] Starting ATLAS job with PandaID=7116208157
[2026-04-29 00:08:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 06:53:14]  *** The last 200 lines of the pilot log: ***
[2026-04-29 06:53:14] 2026-04-29 04:52:24,006 | INFO     | this job has now completed (state=finished)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,006 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,007 | INFO     | log transfer has been attempted: DONE
[2026-04-29 06:53:14] 2026-04-29 04:52:24,007 | INFO     | job 7116208157 has finished - writing final server update
[2026-04-29 06:53:14] 2026-04-29 04:52:24,007 | INFO     | total number of processed events: 400 (read)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,009 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7116208157/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,010 | INFO     | extracted standard info from prmon json
[2026-04-29 06:53:14] 2026-04-29 04:52:24,010 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 06:53:14] 2026-04-29 04:52:24,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 06:53:14] 2026-04-29 04:52:24,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 06:53:14] 2026-04-29 04:52:24,018 | INFO     | fitting pss+swap vs Time
[2026-04-29 06:53:14] 2026-04-29 04:52:24,019 | INFO     | sum of square deviations: 18535566140.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,032 | INFO     | sum of deviations: 35787282055.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,033 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,033 | INFO     | mean y: 2554553.035805627
[2026-04-29 06:53:14] 2026-04-29 04:52:24,033 | INFO     | intersect: 2554553.035805627
[2026-04-29 06:53:14] 2026-04-29 04:52:24,034 | INFO     | chi2: 2.4549537619039143
[2026-04-29 06:53:14] 2026-04-29 04:52:24,034 | INFO     | sum of square deviations: 17833534372.5
[2026-04-29 06:53:14] 2026-04-29 04:52:24,039 | INFO     | sum of deviations: 61867533825.99999
[2026-04-29 06:53:14] 2026-04-29 04:52:24,040 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,040 | INFO     | mean y: 2560158.321243523
[2026-04-29 06:53:14] 2026-04-29 04:52:24,040 | INFO     | intersect: 2560158.321243523
[2026-04-29 06:53:14] 2026-04-29 04:52:24,041 | INFO     | chi2: 1.6813847173578826
[2026-04-29 06:53:14] 2026-04-29 04:52:24,041 | INFO     | current chi2=1.6813847173578826 (change=31.510534192142913 %)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,042 | INFO     | sum of square deviations: 17149456430.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,046 | INFO     | sum of deviations: 60870457655.00001
[2026-04-29 06:53:14] 2026-04-29 04:52:24,047 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,047 | INFO     | mean y: 2559936.034120735
[2026-04-29 06:53:14] 2026-04-29 04:52:24,047 | INFO     | intersect: 2559936.034120735
[2026-04-29 06:53:14] 2026-04-29 04:52:24,047 | INFO     | chi2: 1.6817369677077487
[2026-04-29 06:53:14] 2026-04-29 04:52:24,048 | INFO     | current chi2=1.6817369677077487 (change=-0.020950014962643582 %)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,048 | INFO     | right removable region: 380
[2026-04-29 06:53:14] 2026-04-29 04:52:24,048 | INFO     | sum of square deviations: 17833534372.5
[2026-04-29 06:53:14] 2026-04-29 04:52:24,053 | INFO     | sum of deviations: -35739546749.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,054 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,054 | INFO     | mean y: 2570025.0932642487
[2026-04-29 06:53:14] 2026-04-29 04:52:24,054 | INFO     | intersect: 2570025.0932642487
[2026-04-29 06:53:14] 2026-04-29 04:52:24,055 | INFO     | chi2: 0.8595427365540271
[2026-04-29 06:53:14] 2026-04-29 04:52:24,055 | INFO     | current chi2=0.8595427365540271 (change=64.98741646818563 %)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,056 | INFO     | sum of square deviations: 17149456430.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,060 | INFO     | sum of deviations: -45860098838.99999
[2026-04-29 06:53:14] 2026-04-29 04:52:24,061 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,061 | INFO     | mean y: 2572267.1102362205
[2026-04-29 06:53:14] 2026-04-29 04:52:24,061 | INFO     | intersect: 2572267.1102362205
[2026-04-29 06:53:14] 2026-04-29 04:52:24,062 | INFO     | chi2: 0.8129432557989009
[2026-04-29 06:53:14] 2026-04-29 04:52:24,062 | INFO     | current chi2=0.8129432557989009 (change=5.421426855626412 %)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,062 | INFO     | left removable region: 10
[2026-04-29 06:53:14] 2026-04-29 04:52:24,063 | INFO     | sum of square deviations: 15706536352.5
[2026-04-29 06:53:14] 2026-04-29 04:52:24,067 | INFO     | sum of deviations: -19331026697.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,067 | INFO     | mean x (centered): 0.0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,067 | INFO     | mean y: 2578275.7675675675
[2026-04-29 06:53:14] 2026-04-29 04:52:24,068 | INFO     | intersect: 2578275.7675675675
[2026-04-29 06:53:14] 2026-04-29 04:52:24,068 | INFO     | chi2: 0.026995030440742366
[2026-04-29 06:53:14] 2026-04-29 04:52:24,068 | INFO     | current memory leak: -1.23 B/s (using 370 data points, chi2=0.03)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,069 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,069 | INFO     | ..............................
[2026-04-29 06:53:14] 2026-04-29 04:52:24,069 | INFO     | . Timing measurements:
[2026-04-29 06:53:14] 2026-04-29 04:52:24,069 | INFO     | . get job = 0 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,069 | INFO     | . initial setup = 89 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | . payload setup = 17 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | . stage-in = 0 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | . payload execution = 23850 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | . stage-out = 2 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | . log creation = 0 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,070 | INFO     | ..............................
[2026-04-29 06:53:14] 2026-04-29 04:52:24,193 | INFO     | 
[2026-04-29 06:53:14] 2026-04-29 04:52:24,193 | INFO     | job summary report
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | --------------------------------------------------
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | PanDA job id: 7116208157
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | task id: 49820375
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | errors: (none)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | pilot state: finished 
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | transexitcode: 0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | exeerrorcode: 0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,194 | INFO     | exeerrordiag: 
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | exitcode: 0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | exitmsg: OK
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | cpuconsumptiontime: 99293 s
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | nevents: 400
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | neventsw: 0
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | pid: 22573
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | pgrp: 22573
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | corecount: 8
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | event service: False
[2026-04-29 06:53:14] 2026-04-29 04:52:24,195 | INFO     | sizes: {0: 2280054, 1: 2282540, 2: 2282540, 23871: 2317591, 23872: 2317590, 23875: 2326644, 23878: 2326828, 23881: 2327086}
[2026-04-29 06:53:14] 2026-04-29 04:52:24,196 | INFO     | --------------------------------------------------
[2026-04-29 06:53:14] 2026-04-29 04:52:24,196 | INFO     | 
[2026-04-29 06:53:14] 2026-04-29 04:52:24,196 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,791 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 06:53:14] 2026-04-29 04:52:24,791 | INFO     | job 7116208157 has completed (purged errors)
[2026-04-29 06:53:14] 2026-04-29 04:52:24,791 | INFO     | overall cleanup function is called
[2026-04-29 06:53:14] 2026-04-29 04:52:25,800 | INFO     | --- collectZombieJob: --- 10, [22573]
[2026-04-29 06:53:14] 2026-04-29 04:52:25,800 | INFO     | zombie collector waiting for pid 22573
[2026-04-29 06:53:14] 2026-04-29 04:52:25,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 06:53:14] 2026-04-29 04:52:25,801 | INFO     | collected zombie processes
[2026-04-29 06:53:14] 2026-04-29 04:52:25,801 | INFO     | will attempt to kill all subprocesses of pid=22573
[2026-04-29 06:53:14] 2026-04-29 04:52:25,865 | INFO     | process IDs to be killed: [22573] (in reverse order)
[2026-04-29 06:53:14] 2026-04-29 04:52:26,765 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 06:53:14] 2026-04-29 04:52:26,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 06:53:14] 2026-04-29 04:52:26,767 | INFO     | did not find any defunct processes belonging to 22573
[2026-04-29 06:53:14] 2026-04-29 04:52:26,769 | INFO     | did not find any defunct processes belonging to 22573
[2026-04-29 06:53:14] 2026-04-29 04:52:26,769 | INFO     | Ready for new job
[2026-04-29 06:53:14] 2026-04-29 04:52:26,771 | INFO     | ***************************************
[2026-04-29 06:53:14] 2026-04-29 04:52:26,772 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 06:53:14] 2026-04-29 04:52:26,772 | INFO     | ***************************************
[2026-04-29 06:53:14] 2026-04-29 04:52:26,772 | INFO     | 
[2026-04-29 06:53:14] 2026-04-29 04:52:26,772 | INFO     | pilot is running in a VM
[2026-04-29 06:53:14] 2026-04-29 04:52:26,772 | INFO     | architecture information:
[2026-04-29 06:53:14] 2026-04-29 04:52:26,779 | INFO     | executing command: cat /etc/os-release
[2026-04-29 06:53:14] 2026-04-29 04:52:26,935 | INFO     | cat /etc/os-release:
[2026-04-29 06:53:14] NAME="CentOS Linux"
[2026-04-29 06:53:14] VERSION="7 (Core)"
[2026-04-29 06:53:14] ID="centos"
[2026-04-29 06:53:14] ID_LIKE="rhel fedora"
[2026-04-29 06:53:14] VERSION_ID="7"
[2026-04-29 06:53:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 06:53:14] ANSI_COLOR="0;31"
[2026-04-29 06:53:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 06:53:14] HOME_URL="https://www.centos.org/"
[2026-04-29 06:53:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 06:53:14] 
[2026-04-29 06:53:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 06:53:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 06:53:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 06:53:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 06:53:14] 
[2026-04-29 06:53:14] 2026-04-29 04:52:26,935 | INFO     | ***************************************
[2026-04-29 06:53:14] 2026-04-29 04:52:27,438 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-04-29 06:53:14] 2026-04-29 04:52:27,655 | INFO     | sufficient remaining disk space (492238274560 B)
[2026-04-29 06:53:14] 2026-04-29 04:52:27,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 06:53:14] 2026-04-29 04:52:27,656 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 06:53:14] 2026-04-29 04:52:27,656 | INFO     | update_server=False
[2026-04-29 06:53:14] 2026-04-29 04:52:27,656 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 06:53:14] 2026-04-29 04:52:27,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 06:53:14] 2026-04-29 04:52:27,657 | INFO     | aborting loop
[2026-04-29 06:53:14] 2026-04-29 04:52:27,711 | INFO     | all data control threads have been joined
[2026-04-29 06:53:14] 2026-04-29 04:52:28,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 06:53:14] 2026-04-29 04:52:28,661 | INFO     | [job] retrieve thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:28,662 | INFO     | [job] job monitor thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:28,717 | INFO     | [data] control thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:28,749 | INFO     | all job control threads have been joined
[2026-04-29 06:53:14] 2026-04-29 04:52:28,852 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:28,887 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:29,009 | INFO     | all payload control threads have been joined
[2026-04-29 06:53:14] 2026-04-29 04:52:29,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 06:53:14] 2026-04-29 04:52:29,279 | INFO     | [payload] failed_post thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:29,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:29,360 | INFO     | [job] validate thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:29,673 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:29,755 | INFO     | [job] control thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:30,015 | INFO     | [payload] control thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:30,020 | INFO     | [data] copytool_in thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:30,042 | INFO     | [payload] validate_post thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:30,057 | INFO     | [data] copytool_out thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:30,206 | INFO     | [job] queue monitor thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:31,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 06:53:14] 2026-04-29 04:52:35,019 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 06:53:14] 2026-04-29 04:52:57,641 | INFO     | PID=18150 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-29 06:53:14] 2026-04-29 04:52:57,641 | INFO     | .. there are 2 such processes running
[2026-04-29 06:53:14] 2026-04-29 04:52:57,649 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 06:53:14] 2026-04-29 04:52:57,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 06:53:14] 2026-04-29 04:52:57,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 06:53:14] 2026-04-29 04:53:02,117 | INFO     | [monitor] cgroup control has ended
[2026-04-29 06:53:14] 2026-04-29 04:53:03,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497711712064)>', '<ExcThread(monitor, started 140497263765248)>']
[2026-04-29 06:53:14] 2026-04-29 04:53:03,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 06:53:14] 2026-04-29 04:53:03,685 | INFO     | [monitor] control thread has ended
[2026-04-29 06:53:14] 2026-04-29 04:53:08,697 | INFO     | all workflow threads have been joined
[2026-04-29 06:53:14] 2026-04-29 04:53:08,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 06:53:14] 2026-04-29 04:53:08,698 | INFO     | traces error code: 0
[2026-04-29 06:53:14] 2026-04-29 04:53:08,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 06:53:14] 2026-04-29 04:53:09,104 [wrapper] ==== pilot stdout END ====
[2026-04-29 06:53:14] 2026-04-29 04:53:09,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 06:53:14] 2026-04-29 04:53:09,330 [wrapper] pilotpid: 18150
[2026-04-29 06:53:14] 2026-04-29 04:53:09,429 [wrapper] Pilot exit status: 0
[2026-04-29 06:53:14] 2026-04-29 04:53:09,865 [wrapper] pandaids: 7116208157
[2026-04-29 06:53:14] 2026-04-29 04:53:11,165 [wrapper] cleanup supervisor_pilot 10012 18151
[2026-04-29 06:53:14] 2026-04-29 04:53:11,263 [wrapper] Test setup, not cleaning
[2026-04-29 06:53:14] 2026-04-29 04:53:11,320 [wrapper] apfmon messages muted
[2026-04-29 06:53:14] 2026-04-29 04:53:11,419 [wrapper] ==== wrapper stdout END ====
[2026-04-29 06:53:14] 2026-04-29 04:53:11,537 [wrapper] ==== wrapper stderr END ====
[2026-04-29 06:53:14]  *** Error codes and diagnostics ***
[2026-04-29 06:53:14]     "exeErrorCode": 0,
[2026-04-29 06:53:14]     "pilotErrorCode": 0,
[2026-04-29 06:53:14]  *** Listing of results directory ***
[2026-04-29 06:53:14] total 2447620
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc     683926 Apr 27 02:46 pilot3.tar.gz
[2026-04-29 06:53:14] -rwx------. 1 boinc boinc      36322 Apr 27 02:47 runpilot2-wrapper.sh
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc       5631 Apr 27 02:49 queuedata.json
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc        100 Apr 29 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 06:53:14] -rwxr-xr-x. 1 boinc boinc       7986 Apr 29 00:07 run_atlas
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc        105 Apr 29 00:07 job.xml
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc       6306 Apr 29 00:08 init_data.xml
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc 2222467795 Apr 29 00:08 EVNT.49820373._000041.pool.root.1
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc      15667 Apr 29 00:08 start_atlas.sh
[2026-04-29 06:53:14] drwxrwx--x. 2 boinc boinc         68 Apr 29 00:08 shared
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc     697426 Apr 29 00:08 input.tar.gz
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc          0 Apr 29 00:08 boinc_lockfile
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc       2584 Apr 29 00:08 pandaJob.out
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc        415 Apr 29 00:14 workernode_map.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc    1001138 Apr 29 00:14 agis_schedconf.cvmfs.json
[2026-04-29 06:53:14] drwx------. 5 boinc boinc       4096 Apr 29 00:14 pilot3
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc  274391316 Apr 29 06:50 HITS.49820375._015569.pool.root.1
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc        489 Apr 29 06:50 boinc_task_state.xml
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc       1021 Apr 29 06:52 memory_monitor_summary.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc    1512704 Apr 29 06:52 agis_ddmendpoints.agis.ALL.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc     504625 Apr 29 06:52 log.49820375._015569.job.log.tgz.1
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc       6341 Apr 29 06:52 heartbeat_new.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc       6232 Apr 29 06:52 heartbeat.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc         95 Apr 29 06:52 pilot_heartbeat.json
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc       4883 Apr 29 06:53 pilotlog.txt
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc    2181780 Apr 29 06:53 log.49820375._015569.job.log.1
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc         28 Apr 29 06:53 wrapper_checkpoint.txt
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc       8192 Apr 29 06:53 boinc_mmap_file
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc        357 Apr 29 06:53 output.list
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc        410 Apr 29 06:53 runtime_log
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc    2703360 Apr 29 06:53 result.tar.gz
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc       8439 Apr 29 06:53 runtime_log.err
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc        656 Apr 29 06:53 b23e0a4914e1.diag
[2026-04-29 06:53:14] -rw-r--r--. 1 boinc boinc      20651 Apr 29 06:53 stderr.txt
[2026-04-29 06:53:14] HITS file was successfully produced:
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc 274391316 Apr 29 06:50 shared/HITS.pool.root.1
[2026-04-29 06:53:14]  *** Contents of shared directory: ***
[2026-04-29 06:53:14] total 2441684
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc 2222467795 Apr 29 00:08 ATLAS.root_0
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc      15667 Apr 29 00:08 start_atlas.sh
[2026-04-29 06:53:14] -rw-r--r--. 2 boinc boinc     697426 Apr 29 00:08 input.tar.gz
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc  274391316 Apr 29 06:50 HITS.pool.root.1
[2026-04-29 06:53:14] -rw-------. 1 boinc boinc    2703360 Apr 29 06:53 result.tar.gz
06:53:15 (14174): run_atlas exited; CPU time 99521.635584
06:53:15 (14174): called boinc_finish(0)

</stderr_txt>
]]>

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