Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:27:48 (367052): wrapper (7.7.26015): starting
00:27:48 (367052): wrapper: running run_atlas (--nthreads 4)
[2026-05-02 00:27:48] Arguments: --nthreads 4
[2026-05-02 00:27:48] Threads: 4
[2026-05-02 00:27:48] Checking for CVMFS
[2026-05-02 00:27:48] No cvmfs_config command found, will try listing directly
[2026-05-02 00:27:48] CVMFS is ok
[2026-05-02 00:27:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 00:27:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 00:27:48] Further information can be found at the LHC@home message board.
[2026-05-02 00:27:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 00:27:48] Checking for apptainer binary...
[2026-05-02 00:27:48] which: no apptainer in ((null))
[2026-05-02 00:27:48] apptainer is not installed, using version from CVMFS
[2026-05-02 00:27:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 00:27:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-05-02 00:27:48] apptainer works
[2026-05-02 00:27:48] Set ATHENA_PROC_NUMBER=4
[2026-05-02 00:27:48] Set ATHENA_CORE_NUMBER=4
[2026-05-02 00:27:48] Starting ATLAS job with PandaID=7116402144
[2026-05-02 00:27:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 05:57:43]  *** The last 200 lines of the pilot log: ***
[2026-05-02 05:57:43] 2026-05-02 03:56:44,175 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/2/workernode_map.json
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | INFO     | this job has now completed (state=finished)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | INFO     | log transfer has been attempted: DONE
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | INFO     | job 7116402144 has finished - writing final server update
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2434330/.job.ad'
[2026-05-02 05:57:43] 2026-05-02 03:56:44,176 | INFO     | total number of processed events: 400 (read)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,180 | INFO     | using path: /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-7116402144/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,181 | INFO     | extracted standard info from prmon json
[2026-05-02 05:57:43] 2026-05-02 03:56:44,181 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 05:57:43] 2026-05-02 03:56:44,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 05:57:43] 2026-05-02 03:56:44,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 05:57:43] 2026-05-02 03:56:44,184 | INFO     | fitting pss+swap vs Time
[2026-05-02 05:57:43] 2026-05-02 03:56:44,185 | INFO     | sum of square deviations: 10449170802.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,186 | INFO     | sum of deviations: -29386943980.000015
[2026-05-02 05:57:43] 2026-05-02 03:56:44,186 | INFO     | mean x (centered): 0.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,186 | INFO     | mean y: 2371473.458204334
[2026-05-02 05:57:43] 2026-05-02 03:56:44,187 | INFO     | intersect: 2371473.458204334
[2026-05-02 05:57:43] 2026-05-02 03:56:44,187 | INFO     | chi2: 1.407865847147258
[2026-05-02 05:57:43] 2026-05-02 03:56:44,187 | INFO     | sum of square deviations: 9971385099.5
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | sum of deviations: -29076658147.00001
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | mean x (centered): 0.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | mean y: 2371572.503144654
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | intersect: 2371572.503144654
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | chi2: 1.406704315370233
[2026-05-02 05:57:43] 2026-05-02 03:56:44,189 | INFO     | current chi2=1.406704315370233 (change=0.0825030154242783 %)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,190 | INFO     | right removable region: 317
[2026-05-02 05:57:43] 2026-05-02 03:56:44,190 | INFO     | sum of square deviations: 9971385099.5
[2026-05-02 05:57:43] 2026-05-02 03:56:44,191 | INFO     | sum of deviations: -63190324011.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | mean x (centered): 0.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | mean y: 2382147.6226415094
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | intersect: 2382147.6226415094
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | chi2: 0.21420952901208284
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | current chi2=0.21420952901208284 (change=84.78480535300056 %)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,192 | INFO     | sum of square deviations: 9508390372.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,194 | INFO     | sum of deviations: -50484578927.99999
[2026-05-02 05:57:43] 2026-05-02 03:56:44,194 | INFO     | mean x (centered): 0.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,194 | INFO     | mean y: 2377953.6293929713
[2026-05-02 05:57:43] 2026-05-02 03:56:44,194 | INFO     | intersect: 2377953.6293929713
[2026-05-02 05:57:43] 2026-05-02 03:56:44,194 | INFO     | chi2: 0.17463524439029446
[2026-05-02 05:57:43] 2026-05-02 03:56:44,195 | INFO     | current chi2=0.17463524439029446 (change=18.474567776840654 %)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,195 | INFO     | left removable region: 10
[2026-05-02 05:57:43] 2026-05-02 03:56:44,195 | INFO     | sum of square deviations: 8971993338.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,196 | INFO     | sum of deviations: -49752593385.00002
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | mean x (centered): 0.0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | mean y: 2378203.3876221497
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | intersect: 2378203.3876221497
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | chi2: 0.1730075760713141
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | current memory leak: -5.55 B/s (using 307 data points, chi2=0.17)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,197 | INFO     | could have reported an average CPU frequency of 2594 MHz (14 samples)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | ..............................
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . Timing measurements:
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . get job = 0 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . initial setup = 5 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . payload setup = 8 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . stage-in = 0 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . payload execution = 19690 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . stage-out = 1 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | . log creation = 0 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,198 | INFO     | ..............................
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | 
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | job summary report
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | --------------------------------------------------
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | PanDA job id: 7116402144
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | task id: 49863714
[2026-05-02 05:57:43] 2026-05-02 03:56:44,484 | INFO     | errors: (none)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | pilot state: finished 
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | transexitcode: 0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | exeerrorcode: 0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | exeerrordiag: 
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | exitcode: 0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | exitmsg: OK
[2026-05-02 05:57:43] 2026-05-02 03:56:44,485 | INFO     | cpuconsumptiontime: 74885 s
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | nevents: 400
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | neventsw: 0
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | pid: 375675
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | pgrp: 375675
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | corecount: 4
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | event service: False
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | sizes: {0: 2275262, 1: 2277147, 12: 2277147, 19703: 2310309, 19705: 2319329, 19708: 2319385, 19709: 2319707}
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | --------------------------------------------------
[2026-05-02 05:57:43] 2026-05-02 03:56:44,486 | INFO     | 
[2026-05-02 05:57:43] 2026-05-02 03:56:44,487 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/2
[2026-05-02 05:57:43] 2026-05-02 03:56:44,505 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,505 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,508 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 05:57:43] 2026-05-02 03:56:44,508 | INFO     | job 7116402144 has completed (purged errors)
[2026-05-02 05:57:43] 2026-05-02 03:56:44,508 | INFO     | overall cleanup function is called
[2026-05-02 05:57:43] 2026-05-02 03:56:45,113 | WARNING  | process 375675 can no longer be monitored (due to stat problems) - aborting
[2026-05-02 05:57:43] 2026-05-02 03:56:45,309 | INFO     | using path: /var/lib/boinc/var/slot28/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 05:57:43] 2026-05-02 03:56:45,516 | INFO     | number of running child processes to parent process 375675: 1
[2026-05-02 05:57:43] 2026-05-02 03:56:45,517 | INFO     | --- collectZombieJob: --- 10, [375675]
[2026-05-02 05:57:43] 2026-05-02 03:56:45,517 | INFO     | maximum number of monitored processes: 6
[2026-05-02 05:57:43] 2026-05-02 03:56:45,517 | INFO     | zombie collector waiting for pid 375675
[2026-05-02 05:57:43] 2026-05-02 03:56:45,517 | INFO     | aborting job monitoring since job object (job id=7116402144) has expired
[2026-05-02 05:57:43] 2026-05-02 03:56:45,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 05:57:43] 2026-05-02 03:56:45,518 | INFO     | collected zombie processes
[2026-05-02 05:57:43] 2026-05-02 03:56:45,518 | INFO     | will attempt to kill all subprocesses of pid=375675
[2026-05-02 05:57:43] 2026-05-02 03:56:45,725 | INFO     | process IDs to be killed: [375675] (in reverse order)
[2026-05-02 05:57:43] 2026-05-02 03:56:45,802 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 05:57:43] 2026-05-02 03:56:45,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 05:57:43] 2026-05-02 03:56:45,810 | INFO     | did not find any defunct processes belonging to 375675
[2026-05-02 05:57:43] 2026-05-02 03:56:45,817 | INFO     | did not find any defunct processes belonging to 375675
[2026-05-02 05:57:43] 2026-05-02 03:56:45,817 | INFO     | Ready for new job
[2026-05-02 05:57:43] 2026-05-02 03:56:45,819 | INFO     | ***************************************
[2026-05-02 05:57:43] 2026-05-02 03:56:45,819 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 05:57:43] 2026-05-02 03:56:45,819 | INFO     | ***************************************
[2026-05-02 05:57:43] 2026-05-02 03:56:45,820 | INFO     | 
[2026-05-02 05:57:43] 2026-05-02 03:56:45,822 | INFO     | architecture information:
[2026-05-02 05:57:43] 2026-05-02 03:56:45,822 | INFO     | executing command: cat /etc/os-release
[2026-05-02 05:57:43] 2026-05-02 03:56:45,834 | INFO     | cat /etc/os-release:
[2026-05-02 05:57:43] NAME="CentOS Linux"
[2026-05-02 05:57:43] VERSION="7 (Core)"
[2026-05-02 05:57:43] ID="centos"
[2026-05-02 05:57:43] ID_LIKE="rhel fedora"
[2026-05-02 05:57:43] VERSION_ID="7"
[2026-05-02 05:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 05:57:43] ANSI_COLOR="0;31"
[2026-05-02 05:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 05:57:43] HOME_URL="https://www.centos.org/"
[2026-05-02 05:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 05:57:43] 
[2026-05-02 05:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 05:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 05:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 05:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 05:57:43] 
[2026-05-02 05:57:43] 2026-05-02 03:56:45,835 | INFO     | ***************************************
[2026-05-02 05:57:43] 2026-05-02 03:56:46,337 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/2
[2026-05-02 05:57:43] 2026-05-02 03:56:46,352 | INFO     | sufficient remaining disk space (102459506688 B)
[2026-05-02 05:57:43] 2026-05-02 03:56:46,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 05:57:43] 2026-05-02 03:56:46,353 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 05:57:43] 2026-05-02 03:56:46,353 | INFO     | update_server=False
[2026-05-02 05:57:43] 2026-05-02 03:56:46,353 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 05:57:43] 2026-05-02 03:56:46,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 05:57:43] 2026-05-02 03:56:46,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 05:57:43] 2026-05-02 03:56:46,354 | INFO     | will abort loop
[2026-05-02 05:57:43] 2026-05-02 03:56:46,510 | INFO     | all payload control threads have been joined
[2026-05-02 05:57:43] 2026-05-02 03:56:46,618 | INFO     | all job control threads have been joined
[2026-05-02 05:57:43] 2026-05-02 03:56:47,027 | INFO     | all data control threads have been joined
[2026-05-02 05:57:43] 2026-05-02 03:56:47,359 | INFO     | [job] job monitor thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,359 | INFO     | [job] retrieve thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,384 | INFO     | [payload] validate_post thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,458 | INFO     | [job] validate thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,515 | INFO     | [payload] control thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,587 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,623 | INFO     | [job] control thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:47,806 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:48,032 | INFO     | [data] control thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:48,281 | INFO     | [payload] failed_post thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:48,298 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:48,359 | INFO     | [data] copytool_out thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:48,719 | INFO     | [data] copytool_in thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:49,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 05:57:43] 2026-05-02 03:56:49,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 05:57:43] 2026-05-02 03:56:50,314 | INFO     | [job] queue monitor thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:53,176 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:56:57,043 | INFO     | job.realtimelogging is not enabled
[2026-05-02 05:57:43] 2026-05-02 03:56:58,048 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 05:57:43] 2026-05-02 03:57:16,290 | INFO     | PID=371009 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-02 05:57:43] 2026-05-02 03:57:16,291 | INFO     | .. there are 6 such processes running
[2026-05-02 05:57:43] 2026-05-02 03:57:16,301 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 05:57:43] 2026-05-02 03:57:16,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 05:57:43] 2026-05-02 03:57:16,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 05:57:43] 2026-05-02 03:57:36,060 | INFO     | [monitor] cgroup control has ended
[2026-05-02 05:57:43] 2026-05-02 03:57:37,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23421180692288)>', '<ExcThread(monitor, started 23420944529152)>']
[2026-05-02 05:57:43] 2026-05-02 03:57:38,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 05:57:43] 2026-05-02 03:57:38,410 | INFO     | [monitor] control thread has ended
[2026-05-02 05:57:43] 2026-05-02 03:57:42,930 | INFO     | all workflow threads have been joined
[2026-05-02 05:57:43] 2026-05-02 03:57:42,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 05:57:43] 2026-05-02 03:57:42,930 | INFO     | traces error code: 0
[2026-05-02 05:57:43] 2026-05-02 03:57:42,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 05:57:43] 2026-05-02 03:57:43,049 [wrapper] ==== pilot stdout END ====
[2026-05-02 05:57:43] 2026-05-02 03:57:43,052 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 05:57:43] 2026-05-02 03:57:43,055 [wrapper] pilotpid: 371009
[2026-05-02 05:57:43] 2026-05-02 03:57:43,057 [wrapper] Pilot exit status: 0
[2026-05-02 05:57:43] 2026-05-02 03:57:43,067 [wrapper] pandaids: 7116402144
[2026-05-02 05:57:43] 2026-05-02 03:57:43,119 [wrapper] cleanup supervisor_pilot  605584 371010
[2026-05-02 05:57:43] 2026-05-02 03:57:43,122 [wrapper] Test setup, not cleaning
[2026-05-02 05:57:43] 2026-05-02 03:57:43,125 [wrapper] apfmon messages muted
[2026-05-02 05:57:43] 2026-05-02 03:57:43,127 [wrapper] ==== wrapper stdout END ====
[2026-05-02 05:57:43] 2026-05-02 03:57:43,130 [wrapper] ==== wrapper stderr END ====
[2026-05-02 05:57:43]  *** Error codes and diagnostics ***
[2026-05-02 05:57:43]     "exeErrorCode": 0,
[2026-05-02 05:57:43]     "pilotErrorCode": 0,
[2026-05-02 05:57:43]  *** Listing of results directory ***
[2026-05-02 05:57:43] total 474884
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc    683926 Apr 28 09:39 pilot3.tar.gz
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc      5631 Apr 28 09:56 queuedata.json
[2026-05-02 05:57:43] -rwx------. 1 boinc boinc     36322 Apr 28 09:56 runpilot2-wrapper.sh
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc       100 May  2 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 05:57:43] -rwxr-xr-x. 1 boinc boinc      7986 May  2 00:27 run_atlas
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc       105 May  2 00:27 job.xml
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc      6264 May  2 00:27 init_data.xml
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc 259008512 May  2 00:27 EVNT.49863712._000060.pool.root.1
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc     15667 May  2 00:27 start_atlas.sh
[2026-05-02 05:57:43] drwxrwx--x. 2 boinc boinc      4096 May  2 00:27 shared
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc    697413 May  2 00:27 input.tar.gz
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc         0 May  2 00:27 boinc_lockfile
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc      2574 May  2 00:27 pandaJob.out
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc   1002968 May  2 00:27 agis_schedconf.cvmfs.json
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc       447 May  2 00:28 workernode_map.json
[2026-05-02 05:57:43] drwx------. 5 boinc boinc      4096 May  2 00:28 pilot3
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc 218684084 May  2 05:55 HITS.49863714._003992.pool.root.1
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc       488 May  2 05:56 boinc_task_state.xml
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc        95 May  2 05:56 pilot_heartbeat.json
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc      1035 May  2 05:56 memory_monitor_summary.json
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc   1508687 May  2 05:56 agis_ddmendpoints.agis.ALL.json
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc    390247 May  2 05:56 log.49863714._003992.job.log.tgz.1
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc      6417 May  2 05:56 heartbeat_new.json
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc      6308 May  2 05:56 heartbeat.json
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc      8192 May  2 05:57 boinc_mmap_file
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc        28 May  2 05:57 wrapper_checkpoint.txt
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc      4905 May  2 05:57 pilotlog.txt
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc   1839029 May  2 05:57 log.49863714._003992.job.log.1
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc       357 May  2 05:57 output.list
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc       410 May  2 05:57 runtime_log
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc   2242560 May  2 05:57 result.tar.gz
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc      8823 May  2 05:57 runtime_log.err
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc       664 May  2 05:57 683203ee9da6.diag
[2026-05-02 05:57:43] -rw-r--r--. 1 boinc boinc     21058 May  2 05:57 stderr.txt
[2026-05-02 05:57:43] HITS file was successfully produced:
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc 218684084 May  2 05:55 shared/HITS.pool.root.1
[2026-05-02 05:57:43]  *** Contents of shared directory: ***
[2026-05-02 05:57:43] total 469396
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc 259008512 May  2 00:27 ATLAS.root_0
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc     15667 May  2 00:27 start_atlas.sh
[2026-05-02 05:57:43] -rw-r--r--. 2 boinc boinc    697413 May  2 00:27 input.tar.gz
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc 218684084 May  2 05:55 HITS.pool.root.1
[2026-05-02 05:57:43] -rw-------. 1 boinc boinc   2242560 May  2 05:57 result.tar.gz
05:57:44 (367052): run_atlas exited; CPU time 75452.659411
05:57:44 (367052): called boinc_finish(0)

</stderr_txt>
]]>

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