Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 10:12:34 (25797): vboxwrapper version 26210
2026-04-28 10:12:34 (25797): BOINC client version: 8.2.9
2026-04-28 10:12:34 (25797): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-04-28 10:12:34 (25797): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 10:12:34 (25797): Create VM. (boinc_746f95e45a7680c7, slot#1)
2026-04-28 10:12:34 (25797): Setting Memory Size for VM. (4600MB)
2026-04-28 10:12:34 (25797): Setting CPU Count for VM. (6)
2026-04-28 10:12:34 (25797): Setting Chipset Options for VM.
2026-04-28 10:12:34 (25797): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 10:12:34 (25797): Setting Boot Options for VM.
2026-04-28 10:12:34 (25797): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 10:12:34 (25797): Enabling VM Network Access.
2026-04-28 10:12:34 (25797): Disabling USB Support for VM.
2026-04-28 10:12:34 (25797): Disabling COM Port Support for VM.
2026-04-28 10:12:34 (25797): Disabling LPT Port Support for VM.
2026-04-28 10:12:34 (25797): Disabling Audio Support for VM.
2026-04-28 10:12:35 (25797): Disabling Clipboard Support for VM.
2026-04-28 10:12:35 (25797): Disabling Drag and Drop Support for VM.
2026-04-28 10:12:35 (25797): Adding storage controller(s) to VM.
2026-04-28 10:12:35 (25797): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 10:12:35 (25797): Adding VirtualBox Guest Additions to VM.
2026-04-28 10:12:35 (25797): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 10:12:35 (25797): forwarding host port 54205 to guest port 80
2026-04-28 10:12:35 (25797): Enabling remote desktop for VM.
2026-04-28 10:12:35 (25797): Required extension pack not installed, remote desktop not enabled.
2026-04-28 10:12:35 (25797): Enabling shared directory for VM.
2026-04-28 10:12:35 (25797): Starting VM using VBoxManage interface. (boinc_746f95e45a7680c7, slot#1)
2026-04-28 10:12:36 (25797): Successfully started VM. (PID = '26395')
2026-04-28 10:12:36 (25797): Reporting VM Process ID to BOINC.
2026-04-28 10:12:36 (25797): Guest Log: BIOS: VirtualBox 7.2.8
2026-04-28 10:12:36 (25797): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 10:12:36 (25797): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 10:12:36 (25797): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 10:12:36 (25797): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 10:12:36 (25797): Detected: Web Application Enabled (http://localhost:54205)
2026-04-28 10:12:36 (25797): Preference change detected
2026-04-28 10:12:36 (25797): Setting CPU throttle for VM. (100%)
2026-04-28 10:12:36 (25797): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 10:12:38 (25797): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 10:12:38 (25797): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 10:12:41 (25797): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 10:12:41 (25797): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 10:12:41 (25797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 10:12:46 (25797): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 10:12:46 (25797): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 10:12:49 (25797): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000084 main     Log opened 2026-04-28T08:12:47.700232000Z
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000151 main     OS Product: Linux
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000168 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000182 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000192 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000193 main     Process ID: 1342
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000193 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 10:12:49 (25797): Guest Log: 00:00:00.000551 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 10:12:49 (25797): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 10:12:49 (25797): Guest Log: [INFO] Mounting shared directory
2026-04-28 10:12:49 (25797): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 10:12:52 (25797): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 10:12:52 (25797): Guest Log: [INFO] Detected branch: prod
2026-04-28 10:12:52 (25797): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 10:12:52 (25797): Guest Log: Copying input files
2026-04-28 10:13:01 (25797): Guest Log: Copied input files into RunAtlas.
2026-04-28 10:13:01 (25797): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 10:13:01 (25797): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 10:13:01 (25797): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 10:13:01 (25797): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 10:13:11 (25797): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 10:13:11 (25797): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 10:13:11 (25797): Guest Log: 2.6.3.0 1618 0 32188 158959 4 1 3117648 4096001 0 65024 0 0 n/a 1 5 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 10:13:12 (25797): Guest Log: copied the webapp to /var/www
2026-04-28 10:13:12 (25797): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-28 10:13:12 (25797): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-28 10:13:12 (25797): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 10:13:12 (25797): Guest Log:  *** Starting ATLAS job. (PandaID=7116381540 taskID=49820244) ***
2026-04-28 11:13:32 (25797): VM state change detected. (old = 'running', new = 'paused')
2026-04-28 11:56:20 (25797): VM state change detected. (old = 'paused', new = 'running')
2026-04-28 11:56:22 (25797): Guest Log: 01:00:42.453933 timesync vgsvcTimeSyncWorker: Radical host time change: 2 578 029 000 000ns (HostNow=1 777 370 128 574 000 000 ns HostLast=1 777 367 550 545 000 000 ns)
2026-04-28 11:56:32 (25797): Guest Log: 01:00:52.454988 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 528 446 948 000ns (GuestNow=1 777 370 138 588 023 000 ns GuestLast=1 777 367 610 141 075 000 ns fSetTimeLastLoop=true )
2026-04-28 12:12:45 (25797): Guest Log:  *** Job finished ***
2026-04-28 12:12:45 (25797): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:00,636 | INFO     | [data] copytool_in thread has finished
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:04,560 | INFO     | [data] queue_monitor thread has finished
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:44,874 | INFO     | [monitor] cgroup control has ended
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:45,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289557346112)>', '<ExcThread(monitor, started 140289108854528)>']
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:46,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:46,131 | INFO     | [monitor] control thread has ended
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,035 | INFO     | all workflow threads have been joined
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,035 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,036 | INFO     | traces error code: 0
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,085 [wrapper] ==== pilot stdout END ====
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,087 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,090 [wrapper] pilotpid: 6038
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,092 [wrapper] Pilot exit status: 0
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,133 [wrapper] pandaids: 7116381540
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,150 [wrapper] cleanup supervisor_pilot 25733 6039
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,152 [wrapper] Test setup, not cleaning
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,156 [wrapper] apfmon messages muted
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,158 [wrapper] ==== wrapper stdout END ====
2026-04-28 12:12:45 (25797): Guest Log: 2026-04-28 10:11:51,160 [wrapper] ==== wrapper stderr END ====
2026-04-28 12:12:45 (25797): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 12:12:45 (25797): Guest Log:     "exeErrorCode": 0,
2026-04-28 12:12:45 (25797): Guest Log:     "pilotErrorCode": 0,
2026-04-28 12:12:45 (25797): Guest Log:  *** Listing of results directory ***
2026-04-28 12:12:45 (25797): Guest Log: total 269356
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 28 03:56 pilot3.tar.gz
2026-04-28 12:12:45 (25797): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 28 04:35 runpilot2-wrapper.sh
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 28 04:36 queuedata.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas     15667 Apr 28 08:12 start_atlas.sh
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas    697410 Apr 28 08:12 input.tar.gz
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas      8763 Apr 28 08:12 init_data.xml
2026-04-28 12:12:45 (25797): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 08:12 EVNT.49820242._000077.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Apr 28 08:13 pandaJob.out
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas    992913 Apr 28 08:13 agis_schedconf.cvmfs.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 08:13 agis_ddmendpoints.agis.ALL.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas       431 Apr 28 08:13 workernode_map.json
2026-04-28 12:12:45 (25797): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 08:13 pilot3
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas 269992555 Apr 28 10:10 HITS.49820244._025979.pool.root.1
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas        97 Apr 28 10:10 pilot_heartbeat.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 28 10:10 memory_monitor_summary.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas    437169 Apr 28 10:10 log.49820244._025979.job.log.tgz.1
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas      6359 Apr 28 10:10 heartbeat_new.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas      6250 Apr 28 10:10 heartbeat.json
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas      4683 Apr 28 10:11 pilotlog.txt
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas    442900 Apr 28 10:11 log.49820244._025979.job.log.1
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 10:11 output.list
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 10:11 runtime_log
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas    901120 Apr 28 10:11 result.tar.gz
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 atlas atlas      8374 Apr 28 10:11 runtime_log.err
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas       653 Apr 28 10:11 38fd8c64df2c.diag
2026-04-28 12:12:45 (25797): Guest Log: Looking for outputfile HITS.49820244._025979.pool.root.1
2026-04-28 12:12:45 (25797): Guest Log: HITS file was successfully produced
2026-04-28 12:12:45 (25797): Guest Log: -rw-------. 1 atlas atlas 269992555 Apr 28 10:10 /home/atlas/RunAtlas/HITS.49820244._025979.pool.root.1
2026-04-28 12:12:45 (25797): Guest Log: Successfully finished the ATLAS job!
2026-04-28 12:12:45 (25797): Guest Log: Copying the results back to the shared directory!
2026-04-28 12:12:45 (25797): Guest Log:  *** Contents of shared directory: ***
2026-04-28 12:12:45 (25797): Guest Log: total 2185532
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 root root 2236353537 Apr 28 08:12 ATLAS.root_0
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 root root       8763 Apr 28 08:12 init_data.xml
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 root root     697410 Apr 28 08:12 input.tar.gz
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 root root     901120 Apr 28  2026 result.tar.gz
2026-04-28 12:12:45 (25797): Guest Log: -rw-r--r--. 1 root root      15667 Apr 28 08:12 start_atlas.sh
2026-04-28 12:12:45 (25797): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 12:12:45 (25797): VM Completion File Detected.
2026-04-28 12:12:45 (25797): Powering off VM.
2026-04-28 12:12:45 (25797): Successfully stopped VM.
2026-04-28 12:12:45 (25797): Deregistering VM. (boinc_746f95e45a7680c7, slot#1)
2026-04-28 12:12:45 (25797): Removing network bandwidth throttle group from VM.
2026-04-28 12:12:45 (25797): Removing VM from VirtualBox.
2026-04-28 12:12:50 (25797): called boinc_finish(0)

</stderr_txt>
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